RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 ELMSAN1Q6PJG2 1045 aa16.69■□□□□ 0.26
CPNE1-228ENST00000498814 FAM114A1Q8IWE2 563 aa16.69■□□□□ 0.26
CPNE1-228ENST00000498814 FBXL13Q8NEE6 735 aa16.69■□□□□ 0.26
CPNE1-228ENST00000498814 ZNF461Q8TAF7 563 aa16.69■□□□□ 0.26
CPNE1-228ENST00000498814 MMS19Q96T76 1030 aa16.69■□□□□ 0.26
CPNE1-228ENST00000498814 RTP3Q9BQQ7 232 aa16.69■□□□□ 0.26
CPNE1-228ENST00000498814 BARX2Q9UMQ3 279 aaPredicted RBP16.69■□□□□ 0.26
CPNE1-228ENST00000498814 N4BP1O75113 896 aaKnown RBP16.68■□□□□ 0.26
CPNE1-228ENST00000498814 SPATA31D3P0C874 917 aa16.68■□□□□ 0.26
CPNE1-228ENST00000498814 WARSP23381 471 aaKnown RBP16.68■□□□□ 0.26
CPNE1-228ENST00000498814 LHX1P48742 406 aa16.68■□□□□ 0.26
CPNE1-228ENST00000498814 FMO5P49326 533 aa16.68■□□□□ 0.26
CPNE1-228ENST00000498814 LEXMQ3ZCV2 418 aa16.68■□□□□ 0.26
CPNE1-228ENST00000498814 SPATA31D4Q6ZUB0 917 aa16.68■□□□□ 0.26
CPNE1-228ENST00000498814 ADGRF2Q8IZF7 708 aa16.68■□□□□ 0.26
CPNE1-228ENST00000498814 KREMEN2Q8NCW0 462 aa16.68■□□□□ 0.26
CPNE1-228ENST00000498814 OR10T2Q8NGX3 314 aa16.68■□□□□ 0.26
CPNE1-228ENST00000498814 FUCA2Q9BTY2 467 aa16.68■□□□□ 0.26
CPNE1-228ENST00000498814 IMPG2Q9BZV3 1241 aa16.68■□□□□ 0.26
CPNE1-228ENST00000498814 DNAJC25Q9H1X3 360 aa16.68■□□□□ 0.26
CPNE1-228ENST00000498814 MAN1C1Q9NR34 630 aa16.68■□□□□ 0.26
CPNE1-228ENST00000498814 RAB20Q9NX57 234 aa16.68■□□□□ 0.26
CPNE1-228ENST00000498814 NXF1Q9UBU9 619 aaKnown RBP16.68■□□□□ 0.26
CPNE1-228ENST00000498814 FBXW11Q9UKB1 542 aa16.68■□□□□ 0.26
CPNE1-228ENST00000498814 MAFFQ9ULX9 164 aa16.68■□□□□ 0.26
CPNE1-228ENST00000498814 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.68■□□□□ 0.26
CPNE1-228ENST00000498814 XIRP2A4UGR9 3374 aa16.67■□□□□ 0.26
CPNE1-228ENST00000498814 SYCE3A1L190 88 aa16.67■□□□□ 0.26
CPNE1-228ENST00000498814 WDR27A2RRH5 827 aa16.67■□□□□ 0.26
CPNE1-228ENST00000498814 H3BQ06 376 aaPredicted RBP16.67■□□□□ 0.26
CPNE1-228ENST00000498814 P4HA2O15460 535 aa16.67■□□□□ 0.26
CPNE1-228ENST00000498814 P4HA1P13674 534 aa16.67■□□□□ 0.26
CPNE1-228ENST00000498814 CPB1P15086 417 aa16.67■□□□□ 0.26
CPNE1-228ENST00000498814 ATF2P15336 505 aa16.67■□□□□ 0.26
CPNE1-228ENST00000498814 ARPP19P56211 112 aa16.67■□□□□ 0.26
CPNE1-228ENST00000498814 MYL7Q01449 175 aa16.67■□□□□ 0.26
CPNE1-228ENST00000498814 KCNH2Q12809 1159 aa16.67■□□□□ 0.26
CPNE1-228ENST00000498814 GPR17Q13304 367 aa16.67■□□□□ 0.26
CPNE1-228ENST00000498814 AAK1Q2M2I8 961 aa16.67■□□□□ 0.26
CPNE1-228ENST00000498814 SYCE2Q6PIF2 218 aa16.67■□□□□ 0.26
CPNE1-228ENST00000498814 RTL10Q7L3V2 364 aa16.67■□□□□ 0.26
CPNE1-228ENST00000498814 OSTM1Q86WC4 334 aa16.67■□□□□ 0.26
CPNE1-228ENST00000498814 CCDC150Q8NCX0 1101 aa16.67■□□□□ 0.26
CPNE1-228ENST00000498814 KBTBD7Q8WVZ9 684 aa16.67■□□□□ 0.26
CPNE1-228ENST00000498814 ATXN2LQ8WWM7 1075 aaKnown RBP16.67■□□□□ 0.26
CPNE1-228ENST00000498814 SEMA4DQ92854 862 aa16.67■□□□□ 0.26
CPNE1-228ENST00000498814 FAXDC2Q96IV6 333 aa16.67■□□□□ 0.26
CPNE1-228ENST00000498814 ACBD6Q9BR61 282 aa16.67■□□□□ 0.26
CPNE1-228ENST00000498814 PI4K2AQ9BTU6 479 aa16.67■□□□□ 0.26
CPNE1-228ENST00000498814 NAT10Q9H0A0 1025 aaKnown RBP16.67■□□□□ 0.26
CPNE1-228ENST00000498814 ZCWPW1Q9H0M4 648 aa16.67■□□□□ 0.26
CPNE1-228ENST00000498814 DDX43Q9NXZ2 648 aaKnown RBP16.67■□□□□ 0.26
CPNE1-228ENST00000498814 AFF4Q9UHB7 1163 aaKnown RBP16.67■□□□□ 0.26
CPNE1-228ENST00000498814 CD207Q9UJ71 328 aa16.67■□□□□ 0.26
CPNE1-228ENST00000498814 POLIQ9UNA4 740 aa16.67■□□□□ 0.26
CPNE1-228ENST00000498814 NFE2L3Q9Y4A8 694 aa16.67■□□□□ 0.26
CPNE1-228ENST00000498814 SPTBN5Q9NRC6 3674 aaKnown RBP16.67■□□□□ 0.26
CPNE1-228ENST00000498814 CLSTN1O94985 981 aa16.66■□□□□ 0.26
CPNE1-228ENST00000498814 PAPLNO95428 1278 aa16.66■□□□□ 0.26
CPNE1-228ENST00000498814 AFPP02771 609 aaKnown RBP16.66■□□□□ 0.26
CPNE1-228ENST00000498814 PCSK1P29120 753 aa16.66■□□□□ 0.26
CPNE1-228ENST00000498814 NOP14P78316 857 aaKnown RBP16.66■□□□□ 0.26
CPNE1-228ENST00000498814 MYL5Q02045 173 aa16.66■□□□□ 0.26
CPNE1-228ENST00000498814 TFF2Q03403 129 aa16.66■□□□□ 0.26
CPNE1-228ENST00000498814 CETN1Q12798 172 aa16.66■□□□□ 0.26
CPNE1-228ENST00000498814 UVSSAQ2YD98 709 aa16.66■□□□□ 0.26
CPNE1-228ENST00000498814 ANO6Q4KMQ2 910 aa16.66■□□□□ 0.26
CPNE1-228ENST00000498814 SPOPLQ6IQ16 392 aa16.66■□□□□ 0.26
CPNE1-228ENST00000498814 SMRP1Q8NCR6 262 aa16.66■□□□□ 0.26
CPNE1-228ENST00000498814 CMASQ8NFW8 434 aaPredicted RBP16.66■□□□□ 0.26
CPNE1-228ENST00000498814 TMEM209Q96SK2 561 aa16.66■□□□□ 0.26
CPNE1-228ENST00000498814 BPIFA3Q9BQP9 254 aa16.66■□□□□ 0.26
CPNE1-228ENST00000498814 MRPL45Q9BRJ2 306 aaKnown RBP16.66■□□□□ 0.26
CPNE1-228ENST00000498814 S1PR5Q9H228 398 aa16.66■□□□□ 0.26
CPNE1-228ENST00000498814 SFXN1Q9H9B4 322 aa16.66■□□□□ 0.26
CPNE1-228ENST00000498814 SAMSN1Q9NSI8 373 aaKnown RBP16.66■□□□□ 0.26
CPNE1-228ENST00000498814 MAGEC2Q9UBF1 373 aaPredicted RBP16.66■□□□□ 0.26
CPNE1-228ENST00000498814 C2orf16Q68DN1 1984 aa16.66■□□□□ 0.26
CPNE1-228ENST00000498814 LRRN2O75325 713 aa16.65■□□□□ 0.26
CPNE1-228ENST00000498814 ZMYND10O75800 440 aa16.65■□□□□ 0.26
CPNE1-228ENST00000498814 OR4Q2P0C623 313 aa16.65■□□□□ 0.26
CPNE1-228ENST00000498814 EEF1GP26641 437 aaKnown RBP16.65■□□□□ 0.26
CPNE1-228ENST00000498814 GNL1P36915 607 aaPredicted RBP16.65■□□□□ 0.26
CPNE1-228ENST00000498814 ASPAP45381 313 aa16.65■□□□□ 0.26
CPNE1-228ENST00000498814 MTIF2P46199 727 aaKnown RBP16.65■□□□□ 0.26
CPNE1-228ENST00000498814 MRPS5P82675 430 aaKnown RBP16.65■□□□□ 0.26
CPNE1-228ENST00000498814 TSPY1Q01534 308 aa16.65■□□□□ 0.26
CPNE1-228ENST00000498814 ITIH3Q06033 890 aa16.65■□□□□ 0.26
CPNE1-228ENST00000498814 SMARCB1Q12824 385 aa16.65■□□□□ 0.26
CPNE1-228ENST00000498814 PUS10Q3MIT2 529 aaKnown RBP16.65■□□□□ 0.26
CPNE1-228ENST00000498814 ZSCAN23Q3MJ62 389 aa16.65■□□□□ 0.26
CPNE1-228ENST00000498814 WDR44Q5JSH3 913 aa16.65■□□□□ 0.26
CPNE1-228ENST00000498814 LIN9Q5TKA1 542 aa16.65■□□□□ 0.26
CPNE1-228ENST00000498814 CDKAL1Q5VV42 579 aa16.65■□□□□ 0.26
CPNE1-228ENST00000498814 RNF19BQ6ZMZ0 732 aa16.65■□□□□ 0.26
CPNE1-228ENST00000498814 CCDC149Q6ZUS6 474 aa16.65■□□□□ 0.26
CPNE1-228ENST00000498814 CREBRFQ8IUR6 639 aa16.65■□□□□ 0.26
CPNE1-228ENST00000498814 TCEAL8Q8IYN2 117 aa16.65■□□□□ 0.26
CPNE1-228ENST00000498814 DCP1BQ8IZD4 617 aaKnown RBP16.65■□□□□ 0.26
CPNE1-228ENST00000498814 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms