RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 CCDC65Q8IXS2 484 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 SYCE1Q8N0S2 351 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 ELOA3Q8NG57 546 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 ETNPPLQ8TBG4 499 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 NUDT8Q8WV74 236 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 EYA3Q99504 573 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 CXorf56Q9H5V9 222 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 JMJD4Q9H9V9 463 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 JPH1Q9HDC5 661 aaPredicted RBP4.21□□□□□ -1.74
CLTC-209ENST00000498711 DONSONQ9NYP3 566 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 TJP2Q9UDY2 1190 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 UBE4BO95155 1302 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 GCOM1H8Y6P7 765 aaPredicted RBP4.21□□□□□ -1.74
CLTC-209ENST00000498711 PGRMC1O00264 195 aaKnown RBP4.21□□□□□ -1.74
CLTC-209ENST00000498711 EIF3DO15371 548 aaKnown RBP eCLIP4.21□□□□□ -1.74
CLTC-209ENST00000498711 AFPP02771 609 aaKnown RBP4.21□□□□□ -1.74
CLTC-209ENST00000498711 TP53P04637 393 aaPredicted RBP4.21□□□□□ -1.74
CLTC-209ENST00000498711 CYP3A4P08684 503 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 PLA2G4BP0C869 781 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 MYZAPP0CAP1 466 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 SPATA31C1P0DKV0 1188 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 PABPC1P11940 636 aaKnown RBP4.21□□□□□ -1.74
CLTC-209ENST00000498711 UCHL3P15374 230 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 MX2P20592 715 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 MUTP22033 750 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 ALAS2P22557 587 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 CTNNA2P26232 953 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 CCNG1P51959 295 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 SEC24CP53992 1094 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 KLHL30Q0D2K2 578 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 MYBPC2Q14324 1141 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 KIAA0753Q2KHM9 967 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 CEP85LQ5SZL2 805 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 CRELD2Q6UXH1 353 aaPredicted RBP4.21□□□□□ -1.74
CLTC-209ENST00000498711 CACNA2D4Q7Z3S7 1137 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 STRA8Q7Z7C7 330 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 CROCCP2Q86T23 111 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 MRPL41Q8IXM3 137 aaKnown RBP4.21□□□□□ -1.74
CLTC-209ENST00000498711 ANKRD13CQ8N6S4 541 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 SMC1BQ8NDV3 1235 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 LNX1Q8TBB1 728 aaPredicted RBP4.21□□□□□ -1.74
CLTC-209ENST00000498711 SLCO2A1Q92959 643 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 CEP95Q96GE4 821 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 RUFY1Q96T51 708 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 SPOCK3Q9BQ16 436 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 POLR3CQ9BUI4 534 aaPredicted RBP4.21□□□□□ -1.74
CLTC-209ENST00000498711 WDR18Q9BV38 432 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 DHX36Q9H2U1 1008 aaKnown RBP4.21□□□□□ -1.74
CLTC-209ENST00000498711 PCYOX1Q9UHG3 505 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 AJAP1Q9UKB5 411 aaPredicted RBP4.21□□□□□ -1.74
CLTC-209ENST00000498711 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.21□□□□□ -1.74
CLTC-209ENST00000498711 SIPA1L1O43166 1804 aa4.21□□□□□ -1.74
CLTC-209ENST00000498711 RBBP6Q7Z6E9 1792 aaKnown RBP4.21□□□□□ -1.74
CLTC-209ENST00000498711 CCT8L1PA6NM43 557 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 TRAF5O00463 557 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 PRODHO43272 600 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 RTN2O75298 545 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 CLEC3AO75596 197 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 TCEA3O75764 348 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 KIAA0754O94854 1291 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 UBOX5O94941 541 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 NPTXRO95502 500 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 GGPS1O95749 300 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 FERP16591 822 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 GBP1P32455 592 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 NEK2P51955 445 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 MRPS25P82663 173 aaKnown RBP4.2□□□□□ -1.74
CLTC-209ENST00000498711 STRN3Q13033 797 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 ADAM9Q13443 819 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 GRAPQ13588 217 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 DHX34Q14147 1143 aaKnown RBP4.2□□□□□ -1.74
CLTC-209ENST00000498711 KIF22Q14807 665 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 DHCR24Q15392 516 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 KNOP1Q1ED39 458 aaKnown RBP4.2□□□□□ -1.74
CLTC-209ENST00000498711 NBPF9Q3BBW0 867 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 ZBTB37Q5TC79 503 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 DCAF12L1Q5VU92 463 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 MFSD5Q6N075 450 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 NSMFQ6X4W1 530 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 SV2AQ7L0J3 742 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 DYMQ7RTS9 669 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 MAATS1Q7Z4T9 603 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 MAB21L3Q8N8X9 362 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 C12orf50Q8NA57 414 aaPredicted RBP4.2□□□□□ -1.74
CLTC-209ENST00000498711 KLHL23Q8NBE8 558 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 SLC44A5Q8NCS7 719 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 CCDC26Q8TAB7 109 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 GRAPLQ8TC17 118 aaPredicted RBP4.2□□□□□ -1.74
CLTC-209ENST00000498711 TGFBRAP1Q8WUH2 860 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 RBM17Q96I25 401 aaKnown RBP4.2□□□□□ -1.74
CLTC-209ENST00000498711 XPO6Q96QU8 1125 aaKnown RBP4.2□□□□□ -1.74
CLTC-209ENST00000498711 FIZ1Q96SL8 496 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 CARD9Q9H257 536 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 EBF2Q9HAK2 575 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 APEX2Q9UBZ4 518 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 DDX25Q9UHL0 483 aaKnown RBP4.2□□□□□ -1.74
CLTC-209ENST00000498711 HDAC9Q9UKV0 1011 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 NOC2LQ9Y3T9 749 aaKnown RBP4.2□□□□□ -1.74
CLTC-209ENST00000498711 PAPPA2Q9BXP8 1791 aa4.2□□□□□ -1.74
CLTC-209ENST00000498711 ASTN1O14525 1302 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms