RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 KDF1Q8NAX2 398 aaPredicted RBP12.7□□□□□ -0.38
CDK9-205ENST00000498339 TTC16Q8NEE8 873 aa12.7□□□□□ -0.38
CDK9-205ENST00000498339 KIF12Q96FN5 646 aa12.7□□□□□ -0.38
CDK9-205ENST00000498339 ZC3H10Q96K80 434 aaKnown RBP12.7□□□□□ -0.38
CDK9-205ENST00000498339 DUSP15Q9H1R2 295 aaPredicted RBP12.7□□□□□ -0.38
CDK9-205ENST00000498339 EBF3Q9H4W6 596 aa12.7□□□□□ -0.38
CDK9-205ENST00000498339 TASP1Q9H6P5 420 aa12.7□□□□□ -0.38
CDK9-205ENST00000498339 POLR3BQ9NW08 1133 aaPredicted RBP12.7□□□□□ -0.38
CDK9-205ENST00000498339 LNP1A1A4G5 178 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 M0QZQ0 153 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 DCLK1O15075 740 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 HIP1RO75146 1068 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 OAZ2O95190 189 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 VNN2O95498 520 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 EGFP01133 1207 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 CXCL8P10145 99 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 CDC25CP30307 473 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 CDR1P51861 262 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 AMPD2Q01433 879 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 BFSP1Q12934 665 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 GPR17Q13304 367 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 RUNX3Q13761 415 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 UAP1L1Q3KQV9 507 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 TMEM196Q5HYL7 178 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 TRIM68Q6AZZ1 485 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 OVOS1Q6IE37 1185 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 CENPPQ6IPU0 288 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 KIAA1211LQ6NV74 962 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 ARMCX5Q6P1M9 558 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 TMEM130Q8N3G9 435 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 CAMKK1Q8N5S9 505 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 ATAD1Q8NBU5 361 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 RPLP0P6Q8NHW5 317 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 DRC1Q96MC2 740 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 LPIN3Q9BQK8 851 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 TMEM134Q9H6X4 195 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 PTPRHQ9HD43 1115 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 TMEM9BQ9NQ34 198 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 GKN1Q9NS71 199 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 DDX19AQ9NUU7 478 aaKnown RBP12.69□□□□□ -0.38
CDK9-205ENST00000498339 KIAA1024Q9UPX6 916 aa12.69□□□□□ -0.38
CDK9-205ENST00000498339 ABCA7Q8IZY2 2146 aa12.68□□□□□ -0.38
CDK9-205ENST00000498339 SRRM3A6NNA2 597 aaPredicted RBP12.68□□□□□ -0.38
CDK9-205ENST00000498339 KHNYNO15037 678 aaKnown RBP12.68□□□□□ -0.38
CDK9-205ENST00000498339 SLC16A4O15374 487 aa12.68□□□□□ -0.38
CDK9-205ENST00000498339 APBB3O95704 486 aa12.68□□□□□ -0.38
CDK9-205ENST00000498339 TOP3BO95985 862 aaKnown RBP12.68□□□□□ -0.38
CDK9-205ENST00000498339 ODC1P11926 461 aa12.68□□□□□ -0.38
CDK9-205ENST00000498339 PROZP22891 400 aa12.68□□□□□ -0.38
CDK9-205ENST00000498339 U2AF2P26368 475 aaKnown RBP eCLIP12.68□□□□□ -0.38
CDK9-205ENST00000498339 AVPR1AP37288 418 aa12.68□□□□□ -0.38
CDK9-205ENST00000498339 DGKEP52429 567 aa12.68□□□□□ -0.38
CDK9-205ENST00000498339 SAFBQ15424 915 aaKnown RBP eCLIP12.68□□□□□ -0.38
CDK9-205ENST00000498339 CC2D1AQ6P1N0 951 aaPredicted RBP12.68□□□□□ -0.38
CDK9-205ENST00000498339 NECAB1Q8N987 351 aa12.68□□□□□ -0.38
CDK9-205ENST00000498339 EXOC4Q96A65 974 aa12.68□□□□□ -0.38
CDK9-205ENST00000498339 ACDQ96AP0 544 aa12.68□□□□□ -0.38
CDK9-205ENST00000498339 ZBTB45Q96K62 511 aaPredicted RBP12.68□□□□□ -0.38
CDK9-205ENST00000498339 SCNM1Q9BWG6 230 aa12.68□□□□□ -0.38
CDK9-205ENST00000498339 LHX6Q9UPM6 363 aa12.68□□□□□ -0.38
CDK9-205ENST00000498339 INVSQ9Y283 1065 aa12.68□□□□□ -0.38
CDK9-205ENST00000498339 BCLAF3A2AJT9 711 aaKnown RBP12.67□□□□□ -0.38
CDK9-205ENST00000498339 MEFVO15553 781 aaPredicted RBP12.67□□□□□ -0.38
CDK9-205ENST00000498339 XPOTO43592 962 aaKnown RBP12.67□□□□□ -0.38
CDK9-205ENST00000498339 TOM1L1O75674 476 aa12.67□□□□□ -0.38
CDK9-205ENST00000498339 LARGE1O95461 756 aa12.67□□□□□ -0.38
CDK9-205ENST00000498339 FDPSP14324 419 aaKnown RBP12.67□□□□□ -0.38
CDK9-205ENST00000498339 DRD1P21728 446 aa12.67□□□□□ -0.38
CDK9-205ENST00000498339 MUTP22033 750 aa12.67□□□□□ -0.38
CDK9-205ENST00000498339 GUCY1B3Q02153 619 aa12.67□□□□□ -0.38
CDK9-205ENST00000498339 PPP2R3AQ06190 1150 aa12.67□□□□□ -0.38
CDK9-205ENST00000498339 MYBPC2Q14324 1141 aa12.67□□□□□ -0.38
CDK9-205ENST00000498339 ZNF174Q15697 407 aa12.67□□□□□ -0.38
CDK9-205ENST00000498339 ECM1Q16610 540 aa12.67□□□□□ -0.38
CDK9-205ENST00000498339 SLC10A6Q3KNW5 377 aa12.67□□□□□ -0.38
CDK9-205ENST00000498339 SLC39A12Q504Y0 691 aa12.67□□□□□ -0.38
CDK9-205ENST00000498339 TAS1R3Q7RTX0 852 aa12.67□□□□□ -0.38
CDK9-205ENST00000498339 CYP2U1Q7Z449 544 aa12.67□□□□□ -0.38
CDK9-205ENST00000498339 DEFB124Q8NES8 71 aa12.67□□□□□ -0.38
CDK9-205ENST00000498339 SNX29Q8TEQ0 813 aa12.67□□□□□ -0.38
CDK9-205ENST00000498339 GIPC2Q8TF65 315 aa12.67□□□□□ -0.38
CDK9-205ENST00000498339 BICD1Q96G01 975 aa12.67□□□□□ -0.38
CDK9-205ENST00000498339 TPSD1Q9BZJ3 242 aa12.67□□□□□ -0.38
CDK9-205ENST00000498339 HPS4Q9NQG7 708 aa12.67□□□□□ -0.38
CDK9-205ENST00000498339 ARHGAP28Q9P2N2 729 aa12.67□□□□□ -0.38
CDK9-205ENST00000498339 CIZ1Q9ULV3 898 aaPredicted RBP12.67□□□□□ -0.38
CDK9-205ENST00000498339 UBQLN1Q9UMX0 589 aaKnown RBP12.67□□□□□ -0.38
CDK9-205ENST00000498339 RBM19Q9Y4C8 960 aaKnown RBP12.67□□□□□ -0.38
CDK9-205ENST00000498339 IGF2RP11717 2491 aa12.67□□□□□ -0.38
CDK9-205ENST00000498339 HELZP42694 1942 aaKnown RBP12.66□□□□□ -0.38
CDK9-205ENST00000498339 ADAMTS9Q9P2N4 1935 aa12.66□□□□□ -0.38
CDK9-205ENST00000498339 ABLIM1O14639 778 aa12.66□□□□□ -0.38
CDK9-205ENST00000498339 TRDMT1O14717 391 aaKnown RBP12.66□□□□□ -0.38
CDK9-205ENST00000498339 CLDN3O15551 220 aa12.66□□□□□ -0.38
CDK9-205ENST00000498339 CEACAM1P13688 526 aa12.66□□□□□ -0.38
CDK9-205ENST00000498339 ARSAP15289 507 aa12.66□□□□□ -0.38
CDK9-205ENST00000498339 LRPAP1P30533 357 aa12.66□□□□□ -0.38
CDK9-205ENST00000498339 TUFMP49411 452 aaKnown RBP12.66□□□□□ -0.38
CDK9-205ENST00000498339 GUCY2FP51841 1108 aa12.66□□□□□ -0.38
CDK9-205ENST00000498339 RING1Q06587 406 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms