RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 SNX17Q15036 470 aa6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 NECTIN1Q15223 517 aa6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 TERF2Q15554 542 aa6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 SF1Q15637 639 aaKnown RBP6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 ASPRV1Q53RT3 343 aa6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 TMEM177Q53S58 311 aa6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 DGKKQ5KSL6 1271 aa6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 ATAT1Q5SQI0 421 aa6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 INTS11Q5TA45 600 aaKnown RBP6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 MFSD14CQ5VZR4 134 aa6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 SNRNP48Q6IEG0 339 aaKnown RBP6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 STOX1Q6ZVD7 989 aa6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 OTOP3Q7RTS5 596 aa6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 MB21D2Q8IYB1 491 aaPredicted RBP6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 C7orf61Q8IZ16 206 aa6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 EFHBQ8N7U6 833 aa6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 TRPV1Q8NER1 839 aa6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 TET1Q8NFU7 2136 aa6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 CYB5D2Q8WUJ1 264 aa6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 HPS3Q969F9 1004 aa6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 ACO2Q99798 780 aaKnown RBP6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 CELF4Q9BZC1 486 aaKnown RBP6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 TMEM60Q9H2L4 133 aa6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 ACAD9Q9H845 621 aa6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 LRRC4CQ9HCJ2 640 aa6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 PRDM5Q9NQX1 630 aaPredicted RBP6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 ZSWIM5Q9P217 1185 aa6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 CEP131Q9UPN4 1083 aa6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 RIPK3Q9Y572 518 aa6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 PCDHA8Q9Y5H6 950 aa6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 TAF6LQ9Y6J9 622 aa6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 GBF1Q92538 1859 aa6.6□□□□□ -1.35
TMEM39A-212ENST00000497993 ASTN1O14525 1302 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 LOXHD1Q8IVV2 1947 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 K7ENM7 598 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 DNM1LO00429 736 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 ZBED4O75132 1171 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 ZNF865P0CJ78 1059 aaPredicted RBP6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 EDNRBP24530 442 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 SMARCA1P28370 1054 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 ETV3P41162 512 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 ECI1P42126 302 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 RCAN1P53805 252 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 SCAND1P57086 179 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 ANTXR2P58335 489 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 GPR85P60893 370 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 HAND2P61296 217 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 SEMA5AQ13591 1074 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 LLGL1Q15334 1064 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 MSMPQ1L6U9 139 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 TUBB8Q3ZCM7 444 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 BROXQ5VW32 411 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 FAAH2Q6GMR7 532 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 PDXDC1Q6P996 788 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 RSPO2Q6UXX9 243 aaPredicted RBP6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 C22orf34Q6ZV56 151 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 RASGRP2Q7LDG7 609 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 PTRH1Q86Y79 214 aaKnown RBP6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 FBXL16Q8N461 479 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 DIS3LQ8TF46 1054 aaKnown RBP6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 C1orf159Q96HA4 380 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 HEXIM2Q96MH2 286 aaKnown RBP6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 DEFB118Q96PH6 123 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 SERINC2Q96SA4 455 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 TBCBQ99426 244 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 MMP19Q99542 508 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 DPH2Q9BQC3 489 aaPredicted RBP6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 HTATIP2Q9BUP3 242 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 UPF3AQ9H1J1 476 aaKnown RBP6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 GP6Q9HCN6 339 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 A1CFQ9NQ94 594 aaKnown RBP6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 RRN3Q9NYV6 651 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 RTEL1Q9NZ71 1219 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 TPCN1Q9ULQ1 816 aa6.59□□□□□ -1.35
TMEM39A-212ENST00000497993 FRMPD4Q14CM0 1322 aa6.58□□□□□ -1.36
TMEM39A-212ENST00000497993 A0A1W2PPC1 479 aa6.58□□□□□ -1.36
TMEM39A-212ENST00000497993 A0A1W2PRQ8 180 aa6.58□□□□□ -1.36
TMEM39A-212ENST00000497993 BICDL2A1A5D9 508 aa6.58□□□□□ -1.36
TMEM39A-212ENST00000497993 PTPDC1A2A3K4 754 aa6.58□□□□□ -1.36
TMEM39A-212ENST00000497993 GOLGA8AA7E2F4 631 aa6.58□□□□□ -1.36
TMEM39A-212ENST00000497993 GOLGA8BA8MQT2 603 aa6.58□□□□□ -1.36
TMEM39A-212ENST00000497993 E7EWF7 191 aa6.58□□□□□ -1.36
TMEM39A-212ENST00000497993 SNAI1O95863 264 aaPredicted RBP6.58□□□□□ -1.36
TMEM39A-212ENST00000497993 CCND3P30281 292 aaPredicted RBP6.58□□□□□ -1.36
TMEM39A-212ENST00000497993 SSTR4P31391 388 aa6.58□□□□□ -1.36
TMEM39A-212ENST00000497993 LIFRP42702 1097 aa6.58□□□□□ -1.36
TMEM39A-212ENST00000497993 ADKP55263 362 aaKnown RBP6.58□□□□□ -1.36
TMEM39A-212ENST00000497993 OXCT1P55809 520 aa6.58□□□□□ -1.36
TMEM39A-212ENST00000497993 RNF4P78317 190 aa6.58□□□□□ -1.36
TMEM39A-212ENST00000497993 TROAPQ12815 778 aa6.58□□□□□ -1.36
TMEM39A-212ENST00000497993 AUHQ13825 339 aaKnown RBP6.58□□□□□ -1.36
TMEM39A-212ENST00000497993 ARHGAP44Q17R89 818 aa6.58□□□□□ -1.36
TMEM39A-212ENST00000497993 CLEC16AQ2KHT3 1053 aa6.58□□□□□ -1.36
TMEM39A-212ENST00000497993 SLC35G1Q2M3R5 365 aa6.58□□□□□ -1.36
TMEM39A-212ENST00000497993 FAM47CQ5HY64 1035 aa6.58□□□□□ -1.36
TMEM39A-212ENST00000497993 SFRP5Q5T4F7 317 aa6.58□□□□□ -1.36
TMEM39A-212ENST00000497993 ARTNQ5T4W7 220 aa6.58□□□□□ -1.36
TMEM39A-212ENST00000497993 LILRA6Q6PI73 481 aa6.58□□□□□ -1.36
TMEM39A-212ENST00000497993 C1orf122Q6ZSJ8 110 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms