RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 DENND4CQ5VZ89 1909 aa17.98■□□□□ 0.47
VIM-208ENST00000497849 CACNA1EQ15878 2313 aa17.97■□□□□ 0.47
VIM-208ENST00000497849 TAF4O00268 1085 aa17.97■□□□□ 0.47
VIM-208ENST00000497849 SOAT2O75908 522 aa17.97■□□□□ 0.47
VIM-208ENST00000497849 CTDNEP1O95476 244 aa17.97■□□□□ 0.47
VIM-208ENST00000497849 PROZP22891 400 aa17.97■□□□□ 0.47
VIM-208ENST00000497849 CYP4F8P98187 520 aa17.97■□□□□ 0.47
VIM-208ENST00000497849 TAS1R3Q7RTX0 852 aa17.97■□□□□ 0.47
VIM-208ENST00000497849 ATAD1Q8NBU5 361 aa17.97■□□□□ 0.47
VIM-208ENST00000497849 TARS2Q9BW92 718 aaKnown RBP17.97■□□□□ 0.47
VIM-208ENST00000497849 TMEM9BQ9NQ34 198 aa17.97■□□□□ 0.47
VIM-208ENST00000497849 PHLPP2Q6ZVD8 1323 aa17.97■□□□□ 0.47
VIM-208ENST00000497849 MTMR11A4FU01 709 aa17.96■□□□□ 0.47
VIM-208ENST00000497849 PATE3B3GLJ2 98 aa17.96■□□□□ 0.47
VIM-208ENST00000497849 MCF2P10911 925 aa17.96■□□□□ 0.47
VIM-208ENST00000497849 RPA1P27694 616 aa17.96■□□□□ 0.47
VIM-208ENST00000497849 RUNX3Q13761 415 aa17.96■□□□□ 0.47
VIM-208ENST00000497849 KARSQ15046 597 aaKnown RBP17.96■□□□□ 0.47
VIM-208ENST00000497849 PTPAQ15257 358 aa17.96■□□□□ 0.47
VIM-208ENST00000497849 SLC10A6Q3KNW5 377 aa17.96■□□□□ 0.47
VIM-208ENST00000497849 ARHGAP15Q53QZ3 475 aa17.96■□□□□ 0.47
VIM-208ENST00000497849 TRIM68Q6AZZ1 485 aa17.96■□□□□ 0.47
VIM-208ENST00000497849 KIAA1211LQ6NV74 962 aa17.96■□□□□ 0.47
VIM-208ENST00000497849 KIFAP3Q92845 792 aa17.96■□□□□ 0.47
VIM-208ENST00000497849 SLC46A2Q9BY10 475 aa17.96■□□□□ 0.47
VIM-208ENST00000497849 OXCT2Q9BYC2 517 aaPredicted RBP17.96■□□□□ 0.47
VIM-208ENST00000497849 EBF3Q9H4W6 596 aa17.96■□□□□ 0.47
VIM-208ENST00000497849 IL21Q9HBE4 155 aa17.96■□□□□ 0.47
VIM-208ENST00000497849 THG1LQ9NWX6 298 aaKnown RBP17.96■□□□□ 0.47
VIM-208ENST00000497849 EBF1Q9UH73 591 aa17.96■□□□□ 0.47
VIM-208ENST00000497849 ADAMTS20P59510 1910 aa17.96■□□□□ 0.47
VIM-208ENST00000497849 ZNF638Q14966 1978 aaKnown RBP17.95■□□□□ 0.46
VIM-208ENST00000497849 KHNYNO15037 678 aaKnown RBP17.95■□□□□ 0.46
VIM-208ENST00000497849 HYAL3O43820 417 aaPredicted RBP17.95■□□□□ 0.46
VIM-208ENST00000497849 FGF19O95750 216 aa17.95■□□□□ 0.46
VIM-208ENST00000497849 FDPSP14324 419 aaKnown RBP17.95■□□□□ 0.46
VIM-208ENST00000497849 AARSP49588 968 aaKnown RBP eCLIP17.95■□□□□ 0.46
VIM-208ENST00000497849 NAIF1Q69YI7 327 aaPredicted RBP17.95■□□□□ 0.46
VIM-208ENST00000497849 SYT13Q7L8C5 426 aa17.95■□□□□ 0.46
VIM-208ENST00000497849 DEFB124Q8NES8 71 aa17.95■□□□□ 0.46
VIM-208ENST00000497849 EZH1Q92800 747 aaPredicted RBP17.95■□□□□ 0.46
VIM-208ENST00000497849 MRPL4Q9BYD3 311 aaKnown RBP17.95■□□□□ 0.46
VIM-208ENST00000497849 NEUROG3Q9Y4Z2 214 aa17.95■□□□□ 0.46
VIM-208ENST00000497849 OR6C75A6NL08 312 aa17.94■□□□□ 0.46
VIM-208ENST00000497849 BTBD18B2RXH4 712 aa17.94■□□□□ 0.46
VIM-208ENST00000497849 LARGE1O95461 756 aa17.94■□□□□ 0.46
VIM-208ENST00000497849 APBB3O95704 486 aa17.94■□□□□ 0.46
VIM-208ENST00000497849 NPTX2P47972 431 aa17.94■□□□□ 0.46
VIM-208ENST00000497849 GALK1P51570 392 aa17.94■□□□□ 0.46
VIM-208ENST00000497849 ECM1Q16610 540 aa17.94■□□□□ 0.46
VIM-208ENST00000497849 SEZ6Q53EL9 994 aa17.94■□□□□ 0.46
VIM-208ENST00000497849 PMS2CLQ68D20 193 aa17.94■□□□□ 0.46
VIM-208ENST00000497849 RPLP0P6Q8NHW5 317 aa17.94■□□□□ 0.46
VIM-208ENST00000497849 ZBTB45Q96K62 511 aaPredicted RBP17.94■□□□□ 0.46
VIM-208ENST00000497849 LPIN3Q9BQK8 851 aa17.94■□□□□ 0.46
VIM-208ENST00000497849 TCHPQ9BT92 498 aa17.94■□□□□ 0.46
VIM-208ENST00000497849 TMEM134Q9H6X4 195 aa17.94■□□□□ 0.46
VIM-208ENST00000497849 ORC3Q9UBD5 711 aaPredicted RBP17.94■□□□□ 0.46
VIM-208ENST00000497849 KLK13Q9UKR3 277 aa17.94■□□□□ 0.46
VIM-208ENST00000497849 CCL26Q9Y258 94 aa17.94■□□□□ 0.46
VIM-208ENST00000497849 INVSQ9Y283 1065 aa17.94■□□□□ 0.46
VIM-208ENST00000497849 MSRB2Q9Y3D2 182 aa17.94■□□□□ 0.46
VIM-208ENST00000497849 ANK1P16157 1881 aa17.94■□□□□ 0.46
VIM-208ENST00000497849 IGSF10Q6WRI0 2623 aa17.94■□□□□ 0.46
VIM-208ENST00000497849 OBSL1O75147 1896 aa17.93■□□□□ 0.46
VIM-208ENST00000497849 CCDC169A6NNP5 214 aa17.93■□□□□ 0.46
VIM-208ENST00000497849 HARSP12081 509 aaKnown RBP17.93■□□□□ 0.46
VIM-208ENST00000497849 DRD1P21728 446 aa17.93■□□□□ 0.46
VIM-208ENST00000497849 U2AF2P26368 475 aaKnown RBP eCLIP17.93■□□□□ 0.46
VIM-208ENST00000497849 LRPAP1P30533 357 aa17.93■□□□□ 0.46
VIM-208ENST00000497849 GBP1P32455 592 aa17.93■□□□□ 0.46
VIM-208ENST00000497849 PEX3P56589 373 aa17.93■□□□□ 0.46
VIM-208ENST00000497849 IRX4P78413 519 aa17.93■□□□□ 0.46
VIM-208ENST00000497849 DMC1Q14565 340 aa17.93■□□□□ 0.46
VIM-208ENST00000497849 MPZL3Q6UWV2 235 aa17.93■□□□□ 0.46
VIM-208ENST00000497849 ITIH5Q86UX2 942 aa17.93■□□□□ 0.46
VIM-208ENST00000497849 CMTM8Q8IZV2 173 aa17.93■□□□□ 0.46
VIM-208ENST00000497849 RIN3Q8TB24 985 aa17.93■□□□□ 0.46
VIM-208ENST00000497849 TM6SF1Q9BZW5 370 aa17.93■□□□□ 0.46
VIM-208ENST00000497849 BHMT2Q9H2M3 363 aa17.93■□□□□ 0.46
VIM-208ENST00000497849 BRMS1Q9HCU9 246 aa17.93■□□□□ 0.46
VIM-208ENST00000497849 ARHGAP28Q9P2N2 729 aa17.93■□□□□ 0.46
VIM-208ENST00000497849 TSC2P49815 1807 aa17.93■□□□□ 0.46
VIM-208ENST00000497849 PTPRDP23468 1912 aa17.92■□□□□ 0.46
VIM-208ENST00000497849 PFKFB2O60825 505 aa17.92■□□□□ 0.46
VIM-208ENST00000497849 ARSAP15289 507 aa17.92■□□□□ 0.46
VIM-208ENST00000497849 ATF6P18850 670 aa17.92■□□□□ 0.46
VIM-208ENST00000497849 SPAG1Q07617 926 aa17.92■□□□□ 0.46
VIM-208ENST00000497849 MYBPC2Q14324 1141 aa17.92■□□□□ 0.46
VIM-208ENST00000497849 UAP1L1Q3KQV9 507 aa17.92■□□□□ 0.46
VIM-208ENST00000497849 USP37Q86T82 979 aa17.92■□□□□ 0.46
VIM-208ENST00000497849 DAW1Q8N136 415 aa17.92■□□□□ 0.46
VIM-208ENST00000497849 COL26A1Q96A83 441 aa17.92■□□□□ 0.46
VIM-208ENST00000497849 P2RY13Q9BPV8 354 aa17.92■□□□□ 0.46
VIM-208ENST00000497849 PDRG1Q9NUG6 133 aa17.92■□□□□ 0.46
VIM-208ENST00000497849 HSFX1Q9UBD0 423 aa17.92■□□□□ 0.46
VIM-208ENST00000497849 TBX20Q9UMR3 447 aa17.92■□□□□ 0.46
VIM-208ENST00000497849 CAPNS1P04632 268 aa17.91■□□□□ 0.46
VIM-208ENST00000497849 BCKDHBP21953 392 aa17.91■□□□□ 0.46
VIM-208ENST00000497849 CDC25CP30307 473 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms