RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 BPIFB4P59827 614 aa15.17■□□□□ 0.02
VPS26A-209ENST00000497564 ERVK-21P61565 698 aa15.17■□□□□ 0.02
VPS26A-209ENST00000497564 KRT83P78385 493 aa15.17■□□□□ 0.02
VPS26A-209ENST00000497564 SOX4Q06945 474 aaPredicted RBP15.17■□□□□ 0.02
VPS26A-209ENST00000497564 GRIK3Q13003 919 aa15.17■□□□□ 0.02
VPS26A-209ENST00000497564 BMS1Q14692 1282 aaKnown RBP15.17■□□□□ 0.02
VPS26A-209ENST00000497564 SLC18A3Q16572 532 aa15.17■□□□□ 0.02
VPS26A-209ENST00000497564 ZNF662Q6ZS27 426 aa15.17■□□□□ 0.02
VPS26A-209ENST00000497564 VPS36Q86VN1 386 aa15.17■□□□□ 0.02
VPS26A-209ENST00000497564 MICALL1Q8N3F8 863 aa15.17■□□□□ 0.02
VPS26A-209ENST00000497564 TTC39CQ8N584 583 aa15.17■□□□□ 0.02
VPS26A-209ENST00000497564 OLIG1Q8TAK6 271 aa15.17■□□□□ 0.02
VPS26A-209ENST00000497564 ZNF560Q96MR9 790 aa15.17■□□□□ 0.02
VPS26A-209ENST00000497564 TGS1Q96RS0 853 aaKnown RBP15.17■□□□□ 0.02
VPS26A-209ENST00000497564 DEF6Q9H4E7 631 aa15.17■□□□□ 0.02
VPS26A-209ENST00000497564 RNF216Q9NWF9 866 aaPredicted RBP15.17■□□□□ 0.02
VPS26A-209ENST00000497564 TMEM161AQ9NX61 479 aa15.17■□□□□ 0.02
VPS26A-209ENST00000497564 MIOSQ9NXC5 875 aa15.17■□□□□ 0.02
VPS26A-209ENST00000497564 NENFQ9UMX5 172 aa15.17■□□□□ 0.02
VPS26A-209ENST00000497564 REXO2Q9Y3B8 237 aaKnown RBP15.17■□□□□ 0.02
VPS26A-209ENST00000497564 MTCH2Q9Y6C9 303 aa15.17■□□□□ 0.02
VPS26A-209ENST00000497564 BRWD1Q9NSI6 2320 aa15.17■□□□□ 0.02
VPS26A-209ENST00000497564 MUC3AQ02505 3323 aa15.17■□□□□ 0.02
VPS26A-209ENST00000497564 OFD1O75665 1012 aa15.16■□□□□ 0.02
VPS26A-209ENST00000497564 IPO7O95373 1038 aaKnown RBP15.16■□□□□ 0.02
VPS26A-209ENST00000497564 LINC00271P0C7V0 271 aa15.16■□□□□ 0.02
VPS26A-209ENST00000497564 RPL9P32969 192 aaKnown RBP15.16■□□□□ 0.02
VPS26A-209ENST00000497564 WDR72Q3MJ13 1102 aa15.16■□□□□ 0.02
VPS26A-209ENST00000497564 ZNF677Q86XU0 584 aa15.16■□□□□ 0.02
VPS26A-209ENST00000497564 REXO1L1PQ8IX06 675 aa15.16■□□□□ 0.02
VPS26A-209ENST00000497564 TMEM130Q8N3G9 435 aa15.16■□□□□ 0.02
VPS26A-209ENST00000497564 EPS8L1Q8TE68 723 aa15.16■□□□□ 0.02
VPS26A-209ENST00000497564 RSPH1Q8WYR4 309 aa15.16■□□□□ 0.02
VPS26A-209ENST00000497564 DESI2Q9BSY9 194 aa15.16■□□□□ 0.02
VPS26A-209ENST00000497564 GDAP2Q9NXN4 497 aa15.16■□□□□ 0.02
VPS26A-209ENST00000497564 NOCTQ9UK39 431 aaKnown RBP15.16■□□□□ 0.02
VPS26A-209ENST00000497564 POLIQ9UNA4 740 aa15.16■□□□□ 0.02
VPS26A-209ENST00000497564 PCDHB4Q9Y5E5 795 aa15.16■□□□□ 0.02
VPS26A-209ENST00000497564 PPEF2O14830 753 aa15.15■□□□□ 0.02
VPS26A-209ENST00000497564 ZNF263O14978 683 aa15.15■□□□□ 0.02
VPS26A-209ENST00000497564 CYP26A1O43174 497 aa15.15■□□□□ 0.02
VPS26A-209ENST00000497564 DGKIO75912 1065 aa15.15■□□□□ 0.02
VPS26A-209ENST00000497564 KRT5P13647 590 aa15.15■□□□□ 0.02
VPS26A-209ENST00000497564 PAX3P23760 479 aa15.15■□□□□ 0.02
VPS26A-209ENST00000497564 USP8P40818 1118 aa15.15■□□□□ 0.02
VPS26A-209ENST00000497564 TAF6P49848 677 aa15.15■□□□□ 0.02
VPS26A-209ENST00000497564 SCNN1GP51170 649 aa15.15■□□□□ 0.02
VPS26A-209ENST00000497564 TNNC1P63316 161 aa15.15■□□□□ 0.02
VPS26A-209ENST00000497564 INCA1Q0VD86 236 aa15.15■□□□□ 0.02
VPS26A-209ENST00000497564 SPA17Q15506 151 aa15.15■□□□□ 0.02
VPS26A-209ENST00000497564 SV2CQ496J9 727 aa15.15■□□□□ 0.02
VPS26A-209ENST00000497564 C10orf76Q5T2E6 689 aa15.15■□□□□ 0.02
VPS26A-209ENST00000497564 GLB1LQ6UWU2 654 aa15.15■□□□□ 0.02
VPS26A-209ENST00000497564 LIMS2Q7Z4I7 341 aa15.15■□□□□ 0.02
VPS26A-209ENST00000497564 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.15■□□□□ 0.02
VPS26A-209ENST00000497564 ACRBPQ8NEB7 543 aa15.15■□□□□ 0.02
VPS26A-209ENST00000497564 SLC30A5Q8TAD4 765 aa15.15■□□□□ 0.02
VPS26A-209ENST00000497564 ZNF689Q96CS4 500 aaPredicted RBP15.15■□□□□ 0.02
VPS26A-209ENST00000497564 PPP1R13BQ96KQ4 1090 aa15.15■□□□□ 0.02
VPS26A-209ENST00000497564 AGPAT1Q99943 283 aa15.15■□□□□ 0.02
VPS26A-209ENST00000497564 CISHQ9NSE2 258 aa15.15■□□□□ 0.02
VPS26A-209ENST00000497564 RNF19AQ9NV58 838 aa15.15■□□□□ 0.02
VPS26A-209ENST00000497564 NXF1Q9UBU9 619 aaKnown RBP15.15■□□□□ 0.02
VPS26A-209ENST00000497564 NLRC5Q86WI3 1866 aa15.14■□□□□ 0.01
VPS26A-209ENST00000497564 A0A087X0T9 212 aa15.14■□□□□ 0.01
VPS26A-209ENST00000497564 USP27XA6NNY8 438 aa15.14■□□□□ 0.01
VPS26A-209ENST00000497564 CLSTN1O94985 981 aa15.14■□□□□ 0.01
VPS26A-209ENST00000497564 FAM163BP0C2L3 166 aa15.14■□□□□ 0.01
VPS26A-209ENST00000497564 FAM228BP0C875 321 aa15.14■□□□□ 0.01
VPS26A-209ENST00000497564 CYP11B1P15538 503 aa15.14■□□□□ 0.01
VPS26A-209ENST00000497564 PDE6CP51160 858 aa15.14■□□□□ 0.01
VPS26A-209ENST00000497564 AFF1P51825 1210 aaKnown RBP15.14■□□□□ 0.01
VPS26A-209ENST00000497564 CDR2Q01850 454 aa15.14■□□□□ 0.01
VPS26A-209ENST00000497564 PAN2Q504Q3 1202 aaKnown RBP15.14■□□□□ 0.01
VPS26A-209ENST00000497564 CLLU1OSQ5K130 101 aa15.14■□□□□ 0.01
VPS26A-209ENST00000497564 TMEM270Q6UE05 265 aa15.14■□□□□ 0.01
VPS26A-209ENST00000497564 NOP9Q86U38 636 aaKnown RBP15.14■□□□□ 0.01
VPS26A-209ENST00000497564 SLC47A2Q86VL8 602 aa15.14■□□□□ 0.01
VPS26A-209ENST00000497564 NPAS4Q8IUM7 802 aa15.14■□□□□ 0.01
VPS26A-209ENST00000497564 GPIHBP1Q8IV16 184 aa15.14■□□□□ 0.01
VPS26A-209ENST00000497564 C17orf53Q8N3J3 647 aaPredicted RBP15.14■□□□□ 0.01
VPS26A-209ENST00000497564 TXLNBQ8N3L3 684 aa15.14■□□□□ 0.01
VPS26A-209ENST00000497564 RBBP8NLQ8NC74 664 aaPredicted RBP15.14■□□□□ 0.01
VPS26A-209ENST00000497564 RNF169Q8NCN4 708 aa15.14■□□□□ 0.01
VPS26A-209ENST00000497564 DDX1Q92499 740 aaKnown RBP15.14■□□□□ 0.01
VPS26A-209ENST00000497564 UROC1Q96N76 676 aa15.14■□□□□ 0.01
VPS26A-209ENST00000497564 SDCBP2Q9H190 292 aa15.14■□□□□ 0.01
VPS26A-209ENST00000497564 GOLGA2P5Q9HBQ8 144 aa15.14■□□□□ 0.01
VPS26A-209ENST00000497564 LUC7LQ9NQ29 371 aaKnown RBP15.14■□□□□ 0.01
VPS26A-209ENST00000497564 KANSL3Q9P2N6 904 aa15.14■□□□□ 0.01
VPS26A-209ENST00000497564 HCSTQ9UBK5 93 aa15.14■□□□□ 0.01
VPS26A-209ENST00000497564 ADAMTS1Q9UHI8 967 aa15.14■□□□□ 0.01
VPS26A-209ENST00000497564 KIAA1671Q9BY89 1806 aa15.14■□□□□ 0.01
VPS26A-209ENST00000497564 VWA8A3KMH1 1905 aa15.13■□□□□ 0.01
VPS26A-209ENST00000497564 PTPRDP23468 1912 aa15.13■□□□□ 0.01
VPS26A-209ENST00000497564 DDX3XO00571 662 aaKnown RBP eCLIP15.13■□□□□ 0.013e-13■■□□□ 14
VPS26A-209ENST00000497564 PJA2O43164 708 aa15.13■□□□□ 0.01
VPS26A-209ENST00000497564 HOXA2O43364 376 aa15.13■□□□□ 0.01
VPS26A-209ENST00000497564 CILPO75339 1184 aa15.13■□□□□ 0.01
VPS26A-209ENST00000497564 WEE2P0C1S8 567 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms