RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 TMPRSS9Q7Z410 1059 aa7.25□□□□□ -1.25
SF3B1-212ENST00000496458 PCSK9Q8NBP7 692 aaKnown RBP7.25□□□□□ -1.25
SF3B1-212ENST00000496458 PSD4Q8NDX1 1056 aa7.25□□□□□ -1.25
SF3B1-212ENST00000496458 POC1BQ8TC44 478 aa7.25□□□□□ -1.25
SF3B1-212ENST00000496458 ACTRT2Q8TDY3 377 aa7.25□□□□□ -1.25
SF3B1-212ENST00000496458 LPIN2Q92539 896 aa7.25□□□□□ -1.25
SF3B1-212ENST00000496458 SLC9A6Q92581 669 aa7.25□□□□□ -1.25
SF3B1-212ENST00000496458 MTFMTQ96DP5 389 aaKnown RBP7.25□□□□□ -1.25
SF3B1-212ENST00000496458 CAMKK2Q96RR4 588 aa7.25□□□□□ -1.25
SF3B1-212ENST00000496458 RIOX1Q9H6W3 641 aa7.25□□□□□ -1.25
SF3B1-212ENST00000496458 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.25□□□□□ -1.25
SF3B1-212ENST00000496458 YY2O15391 372 aa7.24□□□□□ -1.25
SF3B1-212ENST00000496458 RFPL1O75677 317 aa7.24□□□□□ -1.25
SF3B1-212ENST00000496458 SRGNP10124 158 aa7.24□□□□□ -1.25
SF3B1-212ENST00000496458 PPP3CBP16298 524 aa7.24□□□□□ -1.25
SF3B1-212ENST00000496458 IL12RB1P42701 662 aa7.24□□□□□ -1.25
SF3B1-212ENST00000496458 NPTX2P47972 431 aa7.24□□□□□ -1.25
SF3B1-212ENST00000496458 NANOS3P60323 173 aaKnown RBP7.24□□□□□ -1.25
SF3B1-212ENST00000496458 HLXQ14774 488 aaPredicted RBP7.24□□□□□ -1.25
SF3B1-212ENST00000496458 ZNF169Q14929 603 aaPredicted RBP7.24□□□□□ -1.25
SF3B1-212ENST00000496458 TAF2Q6P1X5 1199 aa7.24□□□□□ -1.25
SF3B1-212ENST00000496458 VWA1Q6PCB0 445 aa7.24□□□□□ -1.25
SF3B1-212ENST00000496458 TSHZ1Q6ZSZ6 1077 aa7.24□□□□□ -1.25
SF3B1-212ENST00000496458 DNAJC10Q8IXB1 793 aa7.24□□□□□ -1.25
SF3B1-212ENST00000496458 CELF5Q8N6W0 485 aaKnown RBP7.24□□□□□ -1.25
SF3B1-212ENST00000496458 TOR1AIP2Q8NFQ8 470 aa7.24□□□□□ -1.25
SF3B1-212ENST00000496458 PLBD2Q8NHP8 589 aa7.24□□□□□ -1.25
SF3B1-212ENST00000496458 KLHDC4Q8TBB5 520 aa7.24□□□□□ -1.25
SF3B1-212ENST00000496458 SIK2Q9H0K1 926 aa7.24□□□□□ -1.25
SF3B1-212ENST00000496458 SMOC2Q9H3U7 446 aa7.24□□□□□ -1.25
SF3B1-212ENST00000496458 PCDHA6Q9UN73 950 aa7.24□□□□□ -1.25
SF3B1-212ENST00000496458 ZAR1LA6NP61 321 aa7.23□□□□□ -1.25
SF3B1-212ENST00000496458 HDCP19113 662 aa7.23□□□□□ -1.25
SF3B1-212ENST00000496458 CLK3P49761 638 aaKnown RBP7.23□□□□□ -1.25
SF3B1-212ENST00000496458 PRR16Q569H4 304 aa7.23□□□□□ -1.25
SF3B1-212ENST00000496458 EPM2AIP1Q7L775 607 aaPredicted RBP7.23□□□□□ -1.25
SF3B1-212ENST00000496458 USP37Q86T82 979 aa7.23□□□□□ -1.25
SF3B1-212ENST00000496458 DENND1CQ8IV53 801 aa7.23□□□□□ -1.25
SF3B1-212ENST00000496458 FAM9AQ8IZU1 332 aaPredicted RBP7.23□□□□□ -1.25
SF3B1-212ENST00000496458 MYCBPAPQ8TBZ2 947 aa7.23□□□□□ -1.25
SF3B1-212ENST00000496458 FBXL20Q96IG2 436 aa7.23□□□□□ -1.25
SF3B1-212ENST00000496458 SARS2Q9NP81 518 aaKnown RBP7.23□□□□□ -1.25
SF3B1-212ENST00000496458 ANLNQ9NQW6 1124 aa7.23□□□□□ -1.25
SF3B1-212ENST00000496458 NOB1Q9ULX3 412 aaKnown RBP7.23□□□□□ -1.25
SF3B1-212ENST00000496458 A0A0B4J269 797 aa7.22□□□□□ -1.25
SF3B1-212ENST00000496458 F5H697 171 aa7.22□□□□□ -1.25
SF3B1-212ENST00000496458 OVOL3O00110 214 aa7.22□□□□□ -1.25
SF3B1-212ENST00000496458 FOLR3P41439 243 aa7.22□□□□□ -1.25
SF3B1-212ENST00000496458 NDUFV1P49821 464 aa7.22□□□□□ -1.25
SF3B1-212ENST00000496458 SOX8P57073 446 aa7.22□□□□□ -1.25
SF3B1-212ENST00000496458 SIM1P81133 766 aaPredicted RBP7.22□□□□□ -1.25
SF3B1-212ENST00000496458 TUBB3Q13509 450 aa7.22□□□□□ -1.25
SF3B1-212ENST00000496458 KHDC1LQ5JSQ8 128 aa7.22□□□□□ -1.25
SF3B1-212ENST00000496458 STRIP1Q5VSL9 837 aa7.22□□□□□ -1.25
SF3B1-212ENST00000496458 B3GNT9Q6UX72 402 aa7.22□□□□□ -1.25
SF3B1-212ENST00000496458 PPP1R32Q7Z5V6 425 aa7.22□□□□□ -1.25
SF3B1-212ENST00000496458 B3GALNT2Q8NCR0 500 aa7.22□□□□□ -1.25
SF3B1-212ENST00000496458 SIMC1Q8NDZ2 872 aa7.22□□□□□ -1.25
SF3B1-212ENST00000496458 FAM46DQ8NEK8 389 aa7.22□□□□□ -1.25
SF3B1-212ENST00000496458 PPP1R35Q8TAP8 253 aa7.22□□□□□ -1.25
SF3B1-212ENST00000496458 SLC35G2Q8TBE7 412 aa7.22□□□□□ -1.25
SF3B1-212ENST00000496458 DDX17Q92841 729 aaKnown RBP7.22□□□□□ -1.25
SF3B1-212ENST00000496458 TAAR9Q96RI9 348 aa7.22□□□□□ -1.25
SF3B1-212ENST00000496458 CRAMP1Q96RY5 1269 aa7.22□□□□□ -1.25
SF3B1-212ENST00000496458 ACO2Q99798 780 aaKnown RBP7.22□□□□□ -1.25
SF3B1-212ENST00000496458 RSAD1Q9HA92 442 aa7.22□□□□□ -1.25
SF3B1-212ENST00000496458 FOXJ2Q9P0K8 574 aa7.22□□□□□ -1.25
SF3B1-212ENST00000496458 STAP2Q9UGK3 403 aa7.22□□□□□ -1.25
SF3B1-212ENST00000496458 CPA4Q9UI42 421 aa7.22□□□□□ -1.25
SF3B1-212ENST00000496458 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.21□□□□□ -1.26
SF3B1-212ENST00000496458 H3BML4 177 aa7.21□□□□□ -1.26
SF3B1-212ENST00000496458 MGST3O14880 152 aa7.21□□□□□ -1.26
SF3B1-212ENST00000496458 PROM1O43490 865 aa7.21□□□□□ -1.26
SF3B1-212ENST00000496458 SCGB1D2O95969 90 aa7.21□□□□□ -1.26
SF3B1-212ENST00000496458 MYBP10242 640 aa7.21□□□□□ -1.26
SF3B1-212ENST00000496458 HTR1BP28222 390 aa7.21□□□□□ -1.26
SF3B1-212ENST00000496458 KCNJ5P48544 419 aa7.21□□□□□ -1.26
SF3B1-212ENST00000496458 RAB1AP62820 205 aa7.21□□□□□ -1.26
SF3B1-212ENST00000496458 TCF15Q12870 199 aa7.21□□□□□ -1.26
SF3B1-212ENST00000496458 GTF2H3Q13889 308 aa7.21□□□□□ -1.26
SF3B1-212ENST00000496458 LRRC41Q15345 812 aa7.21□□□□□ -1.26
SF3B1-212ENST00000496458 JDP2Q8WYK2 163 aa7.21□□□□□ -1.26
SF3B1-212ENST00000496458 TFAP2BQ92481 460 aa7.21□□□□□ -1.26
SF3B1-212ENST00000496458 GABBR1Q9UBS5 961 aa7.21□□□□□ -1.26
SF3B1-212ENST00000496458 PPFIA2O75334 1257 aa7.2□□□□□ -1.26
SF3B1-212ENST00000496458 UBXN7O94888 489 aa7.2□□□□□ -1.26
SF3B1-212ENST00000496458 CHRM2P08172 466 aa7.2□□□□□ -1.26
SF3B1-212ENST00000496458 PIM1P11309 404 aaPredicted RBP7.2□□□□□ -1.26
SF3B1-212ENST00000496458 ITGALP20701 1170 aa7.2□□□□□ -1.26
SF3B1-212ENST00000496458 PTH2RP49190 550 aa7.2□□□□□ -1.26
SF3B1-212ENST00000496458 TOB1P50616 345 aaPredicted RBP7.2□□□□□ -1.26
SF3B1-212ENST00000496458 HNRNPMP52272 730 aaKnown RBP eCLIP7.2□□□□□ -1.26
SF3B1-212ENST00000496458 EMC10Q5UCC4 262 aa7.2□□□□□ -1.26
SF3B1-212ENST00000496458 ZBTB34Q8NCN2 500 aa7.2□□□□□ -1.26
SF3B1-212ENST00000496458 CAGE1Q8TC20 777 aa7.2□□□□□ -1.26
SF3B1-212ENST00000496458 PDLIM2Q96JY6 352 aa7.2□□□□□ -1.26
SF3B1-212ENST00000496458 PRDM13Q9H4Q3 707 aa7.2□□□□□ -1.26
SF3B1-212ENST00000496458 KIAA1586Q9HCI6 787 aa7.2□□□□□ -1.26
SF3B1-212ENST00000496458 ALG13Q9NP73 1137 aaKnown RBP7.2□□□□□ -1.26
SF3B1-212ENST00000496458 CNNM1Q9NRU3 951 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms