RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 LEMD2Q8NC56 503 aa15.42■□□□□ 0.06
VTI1A-209ENST00000496445 DHX58Q96C10 678 aa15.42■□□□□ 0.06
VTI1A-209ENST00000496445 PYM1Q9BRP8 204 aaKnown RBP15.42■□□□□ 0.06
VTI1A-209ENST00000496445 ZCWPW1Q9H0M4 648 aa15.42■□□□□ 0.06
VTI1A-209ENST00000496445 CUEDC2Q9H467 287 aa15.42■□□□□ 0.06
VTI1A-209ENST00000496445 PCIF1Q9H4Z3 704 aa15.42■□□□□ 0.06
VTI1A-209ENST00000496445 DSEQ9UL01 958 aa15.42■□□□□ 0.06
VTI1A-209ENST00000496445 SHISA7A6NL88 538 aa15.41■□□□□ 0.06
VTI1A-209ENST00000496445 EXTL3O43909 919 aa15.41■□□□□ 0.06
VTI1A-209ENST00000496445 GFRA3O60609 400 aa15.41■□□□□ 0.06
VTI1A-209ENST00000496445 LDHAP00338 332 aaKnown RBP15.41■□□□□ 0.06
VTI1A-209ENST00000496445 POLR2BP30876 1174 aaKnown RBP15.41■□□□□ 0.06
VTI1A-209ENST00000496445 CDR1P51861 262 aa15.41■□□□□ 0.06
VTI1A-209ENST00000496445 TFAMQ00059 246 aaKnown RBP15.41■□□□□ 0.06
VTI1A-209ENST00000496445 PFKPQ01813 784 aa15.41■□□□□ 0.06
VTI1A-209ENST00000496445 PRKCQQ04759 706 aa15.41■□□□□ 0.06
VTI1A-209ENST00000496445 GRM2Q14416 872 aa15.41■□□□□ 0.06
VTI1A-209ENST00000496445 SV2CQ496J9 727 aa15.41■□□□□ 0.06
VTI1A-209ENST00000496445 SLC39A12Q504Y0 691 aa15.41■□□□□ 0.06
VTI1A-209ENST00000496445 WSCD1Q658N2 575 aa15.41■□□□□ 0.06
VTI1A-209ENST00000496445 ARMCX5Q6P1M9 558 aa15.41■□□□□ 0.06
VTI1A-209ENST00000496445 CNNM4Q6P4Q7 775 aa15.41■□□□□ 0.06
VTI1A-209ENST00000496445 VITQ6UXI7 678 aa15.41■□□□□ 0.06
VTI1A-209ENST00000496445 FRMD5Q7Z6J6 570 aa15.41■□□□□ 0.06
VTI1A-209ENST00000496445 ZNF560Q96MR9 790 aa15.41■□□□□ 0.06
VTI1A-209ENST00000496445 ZNF334Q9HCZ1 680 aaPredicted RBP15.41■□□□□ 0.06
VTI1A-209ENST00000496445 SIT1Q9Y3P8 196 aa15.41■□□□□ 0.06
VTI1A-209ENST00000496445 MTF2Q9Y483 593 aaPredicted RBP15.41■□□□□ 0.06
VTI1A-209ENST00000496445 CACNA1IQ9P0X4 2223 aa15.41■□□□□ 0.06
VTI1A-209ENST00000496445 PTPRJQ12913 1337 aa15.41■□□□□ 0.06
VTI1A-209ENST00000496445 A0A1W2PRU2 124 aa15.4■□□□□ 0.06
VTI1A-209ENST00000496445 KANSL1LA0AUZ9 987 aa15.4■□□□□ 0.06
VTI1A-209ENST00000496445 PRR23AA6NEV1 266 aa15.4■□□□□ 0.06
VTI1A-209ENST00000496445 KPNA7A9QM74 516 aa15.4■□□□□ 0.06
VTI1A-209ENST00000496445 ITGB3P05106 788 aa15.4■□□□□ 0.06
VTI1A-209ENST00000496445 CASP1P29466 404 aa15.4■□□□□ 0.06
VTI1A-209ENST00000496445 EPHB3P54753 998 aa15.4■□□□□ 0.06
VTI1A-209ENST00000496445 ASIC1P78348 528 aa15.4■□□□□ 0.06
VTI1A-209ENST00000496445 STXBP5Q5T5C0 1151 aa15.4■□□□□ 0.06
VTI1A-209ENST00000496445 EPM2AIP1Q7L775 607 aaPredicted RBP15.4■□□□□ 0.06
VTI1A-209ENST00000496445 ASCL5Q7RTU5 278 aa15.4■□□□□ 0.06
VTI1A-209ENST00000496445 LRRTM3Q86VH5 581 aa15.4■□□□□ 0.06
VTI1A-209ENST00000496445 GPD1LQ8N335 351 aa15.4■□□□□ 0.06
VTI1A-209ENST00000496445 ZSCAN18Q8TBC5 510 aaPredicted RBP15.4■□□□□ 0.06
VTI1A-209ENST00000496445 SMARCD2Q92925 531 aa15.4■□□□□ 0.06
VTI1A-209ENST00000496445 PSMG2Q969U7 264 aa15.4■□□□□ 0.06
VTI1A-209ENST00000496445 SHDQ96IW2 340 aa15.4■□□□□ 0.06
VTI1A-209ENST00000496445 LPIN3Q9BQK8 851 aa15.4■□□□□ 0.06
VTI1A-209ENST00000496445 MKNK1Q9BUB5 465 aa15.4■□□□□ 0.06
VTI1A-209ENST00000496445 MTMR12Q9C0I1 747 aa15.4■□□□□ 0.06
VTI1A-209ENST00000496445 TMEM206Q9H813 350 aa15.4■□□□□ 0.06
VTI1A-209ENST00000496445 TRPV4Q9HBA0 871 aa15.4■□□□□ 0.06
VTI1A-209ENST00000496445 ZFP14Q9HCL3 533 aa15.4■□□□□ 0.06
VTI1A-209ENST00000496445 PDE11AQ9HCR9 933 aa15.4■□□□□ 0.06
VTI1A-209ENST00000496445 HSFX1Q9UBD0 423 aa15.4■□□□□ 0.06
VTI1A-209ENST00000496445 SIX4Q9UIU6 781 aa15.4■□□□□ 0.06
VTI1A-209ENST00000496445 PCDHA7Q9UN72 937 aa15.4■□□□□ 0.06
VTI1A-209ENST00000496445 DCHS1Q96JQ0 3298 aa15.39■□□□□ 0.05
VTI1A-209ENST00000496445 ATF6P18850 670 aa15.39■□□□□ 0.05
VTI1A-209ENST00000496445 CD72P21854 359 aa15.39■□□□□ 0.05
VTI1A-209ENST00000496445 VIPR2P41587 438 aa15.39■□□□□ 0.05
VTI1A-209ENST00000496445 ALDH1A3P47895 512 aa15.39■□□□□ 0.05
VTI1A-209ENST00000496445 EHHADHQ08426 723 aa15.39■□□□□ 0.05
VTI1A-209ENST00000496445 RESP18Q5W5W9 173 aa15.39■□□□□ 0.05
VTI1A-209ENST00000496445 LMBRD2Q68DH5 695 aaPredicted RBP15.39■□□□□ 0.05
VTI1A-209ENST00000496445 TPRG1Q6ZUI0 275 aa15.39■□□□□ 0.05
VTI1A-209ENST00000496445 GAREM2Q75VX8 874 aa15.39■□□□□ 0.05
VTI1A-209ENST00000496445 IQUBQ8NA54 791 aa15.39■□□□□ 0.05
VTI1A-209ENST00000496445 SPRYD3Q8NCJ5 442 aa15.39■□□□□ 0.05
VTI1A-209ENST00000496445 KCNG4Q8TDN1 519 aa15.39■□□□□ 0.05
VTI1A-209ENST00000496445 NOC3LQ8WTT2 800 aaKnown RBP15.39■□□□□ 0.05
VTI1A-209ENST00000496445 DNASE1L2Q92874 299 aa15.39■□□□□ 0.05
VTI1A-209ENST00000496445 RSPRY1Q96DX4 576 aa15.39■□□□□ 0.05
VTI1A-209ENST00000496445 SEPT5Q99719 369 aaPredicted RBP15.39■□□□□ 0.05
VTI1A-209ENST00000496445 C7orf25Q9BPX7 421 aa15.39■□□□□ 0.05
VTI1A-209ENST00000496445 LRRC27Q9C0I9 530 aa15.39■□□□□ 0.05
VTI1A-209ENST00000496445 LTB4R2Q9NPC1 389 aa15.39■□□□□ 0.05
VTI1A-209ENST00000496445 HEBP1Q9NRV9 189 aa15.39■□□□□ 0.05
VTI1A-209ENST00000496445 TMLHEQ9NVH6 421 aa15.39■□□□□ 0.05
VTI1A-209ENST00000496445 L1RE1Q9UN81 338 aa15.39■□□□□ 0.05
VTI1A-209ENST00000496445 AGAP1Q9UPQ3 857 aa15.39■□□□□ 0.05
VTI1A-209ENST00000496445 RIF1Q5UIP0 2472 aaKnown RBP15.39■□□□□ 0.05
VTI1A-209ENST00000496445 PTPRDP23468 1912 aa15.39■□□□□ 0.05
VTI1A-209ENST00000496445 DMXL1Q9Y485 3027 aa15.38■□□□□ 0.05
VTI1A-209ENST00000496445 EIF3DO15371 548 aaKnown RBP eCLIP15.38■□□□□ 0.05
VTI1A-209ENST00000496445 POLR2DO15514 142 aaKnown RBP15.38■□□□□ 0.05
VTI1A-209ENST00000496445 HSP90AA1P07900 732 aaKnown RBP15.38■□□□□ 0.05
VTI1A-209ENST00000496445 TARSP26639 723 aaKnown RBP15.38■□□□□ 0.05
VTI1A-209ENST00000496445 PNPLA4P41247 253 aa15.38■□□□□ 0.05
VTI1A-209ENST00000496445 DNM1Q05193 864 aaKnown RBP15.38■□□□□ 0.05
VTI1A-209ENST00000496445 UBXN2BQ14CS0 331 aa15.38■□□□□ 0.05
VTI1A-209ENST00000496445 FAM26FQ5R3K3 315 aa15.38■□□□□ 0.05
VTI1A-209ENST00000496445 DNAJB7Q7Z6W7 309 aaPredicted RBP15.38■□□□□ 0.05
VTI1A-209ENST00000496445 METTL23Q86XA0 190 aa15.38■□□□□ 0.05
VTI1A-209ENST00000496445 CBWD2Q8IUF1 395 aa15.38■□□□□ 0.05
VTI1A-209ENST00000496445 PDCL2Q8N4E4 241 aa15.38■□□□□ 0.05
VTI1A-209ENST00000496445 LRRC52Q8N7C0 313 aa15.38■□□□□ 0.05
VTI1A-209ENST00000496445 MAGEF1Q9HAY2 307 aa15.38■□□□□ 0.05
VTI1A-209ENST00000496445 HSPBP1Q9NZL4 362 aa15.38■□□□□ 0.05
VTI1A-209ENST00000496445 ITGA11Q9UKX5 1188 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms