RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 FAM153AQ9UHL3 310 aa22.54■■□□□ 1.2
FGFR1-223ENST00000496296 TRIM17Q9Y577 477 aa22.54■■□□□ 1.2
FGFR1-223ENST00000496296 CDY2AQ9Y6F7 541 aa22.54■■□□□ 1.2
FGFR1-223ENST00000496296 ESYT3A0FGR9 886 aa22.53■■□□□ 1.2
FGFR1-223ENST00000496296 FGGP02679 453 aa22.53■■□□□ 1.2
FGFR1-223ENST00000496296 CTNNA2P26232 953 aa22.53■■□□□ 1.2
FGFR1-223ENST00000496296 ITGA7Q13683 1181 aa22.53■■□□□ 1.2
FGFR1-223ENST00000496296 PTPROQ16827 1216 aa22.53■■□□□ 1.2
FGFR1-223ENST00000496296 CLEC16AQ2KHT3 1053 aa22.53■■□□□ 1.2
FGFR1-223ENST00000496296 ALG3Q92685 438 aa22.53■■□□□ 1.2
FGFR1-223ENST00000496296 GLT1D1Q96MS3 346 aa22.53■■□□□ 1.2
FGFR1-223ENST00000496296 ZSWIM1Q9BR11 485 aa22.53■■□□□ 1.2
FGFR1-223ENST00000496296 TSEN34Q9BSV6 310 aaKnown RBP22.53■■□□□ 1.2
FGFR1-223ENST00000496296 DDX47Q9H0S4 455 aaKnown RBP22.53■■□□□ 1.2
FGFR1-223ENST00000496296 PEX5P50542 639 aa22.52■■□□□ 1.2
FGFR1-223ENST00000496296 RIN2Q8WYP3 895 aaPredicted RBP22.52■■□□□ 1.2
FGFR1-223ENST00000496296 EIF2AQ9BY44 585 aaKnown RBP22.52■■□□□ 1.2
FGFR1-223ENST00000496296 NIF3L1Q9GZT8 377 aa22.52■■□□□ 1.2
FGFR1-223ENST00000496296 SNTG2Q9NY99 539 aa22.52■■□□□ 1.2
FGFR1-223ENST00000496296 NOD1Q9Y239 953 aa22.52■■□□□ 1.2
FGFR1-223ENST00000496296 DERAQ9Y315 318 aa22.52■■□□□ 1.2
FGFR1-223ENST00000496296 ERICH4A6NGS2 130 aa22.51■■□□□ 1.19
FGFR1-223ENST00000496296 LMAN1P49257 510 aa22.51■■□□□ 1.19
FGFR1-223ENST00000496296 PIK3R5Q8WYR1 880 aa22.51■■□□□ 1.19
FGFR1-223ENST00000496296 AVENQ9NQS1 362 aaPredicted RBP22.51■■□□□ 1.19
FGFR1-223ENST00000496296 PCDHB4Q9Y5E5 795 aa22.51■■□□□ 1.19
FGFR1-223ENST00000496296 PCDHB2Q9Y5E7 798 aa22.51■■□□□ 1.19
FGFR1-223ENST00000496296 MEFVO15553 781 aaPredicted RBP22.51■■□□□ 1.19
FGFR1-223ENST00000496296 TNS4Q8IZW8 715 aa22.51■■□□□ 1.19
FGFR1-223ENST00000496296 C1orf127Q8N9H9 656 aa22.51■■□□□ 1.19
FGFR1-223ENST00000496296 KIF12Q96FN5 646 aa22.51■■□□□ 1.19
FGFR1-223ENST00000496296 ZIM3Q96PE6 472 aa22.51■■□□□ 1.19
FGFR1-223ENST00000496296 FAM114A2Q9NRY5 505 aa22.51■■□□□ 1.19
FGFR1-223ENST00000496296 ITGA11Q9UKX5 1188 aa22.51■■□□□ 1.19
FGFR1-223ENST00000496296 CNTN6Q9UQ52 1028 aa22.51■■□□□ 1.19
FGFR1-223ENST00000496296 PTCH2Q9Y6C5 1203 aa22.51■■□□□ 1.19
FGFR1-223ENST00000496296 ANK1P16157 1881 aa22.51■■□□□ 1.19
FGFR1-223ENST00000496296 GRIN2DO15399 1336 aa22.5■■□□□ 1.19
FGFR1-223ENST00000496296 CENPFP49454 3210 aa22.5■■□□□ 1.19
FGFR1-223ENST00000496296 GOLGA6L10A0A0M3HER8 536 aa22.5■■□□□ 1.19
FGFR1-223ENST00000496296 FAM187AA6NFU0 413 aa22.5■■□□□ 1.19
FGFR1-223ENST00000496296 ITGB3P05106 788 aa22.5■■□□□ 1.19
FGFR1-223ENST00000496296 UNGP13051 313 aaPredicted RBP22.5■■□□□ 1.19
FGFR1-223ENST00000496296 ATICP31939 592 aa22.5■■□□□ 1.19
FGFR1-223ENST00000496296 YWHAEP62258 255 aaKnown RBP22.5■■□□□ 1.19
FGFR1-223ENST00000496296 DHX34Q14147 1143 aaKnown RBP22.5■■□□□ 1.19
FGFR1-223ENST00000496296 TRADDQ15628 312 aa22.5■■□□□ 1.19
FGFR1-223ENST00000496296 CFAP58Q5T655 872 aa22.5■■□□□ 1.19
FGFR1-223ENST00000496296 FAM228AQ86W67 206 aa22.5■■□□□ 1.19
FGFR1-223ENST00000496296 ARRDC4Q8NCT1 418 aa22.5■■□□□ 1.19
FGFR1-223ENST00000496296 ZNF564Q8TBZ8 553 aaPredicted RBP22.5■■□□□ 1.19
FGFR1-223ENST00000496296 FAXDC2Q96IV6 333 aa22.5■■□□□ 1.19
FGFR1-223ENST00000496296 SHOX2O60902 331 aaPredicted RBP22.49■■□□□ 1.19
FGFR1-223ENST00000496296 ACO1P21399 889 aaKnown RBP22.49■■□□□ 1.19
FGFR1-223ENST00000496296 COMTP21964 271 aa22.49■■□□□ 1.19
FGFR1-223ENST00000496296 CTNNA1P35221 906 aaKnown RBP22.49■■□□□ 1.19
FGFR1-223ENST00000496296 ACTN2P35609 894 aa22.49■■□□□ 1.19
FGFR1-223ENST00000496296 THPOP40225 353 aa22.49■■□□□ 1.19
FGFR1-223ENST00000496296 PTK7Q13308 1070 aa22.49■■□□□ 1.19
FGFR1-223ENST00000496296 ZNF667Q5HYK9 610 aa22.49■■□□□ 1.19
FGFR1-223ENST00000496296 LHX8Q68G74 356 aa22.49■■□□□ 1.19
FGFR1-223ENST00000496296 TMEM270Q6UE05 265 aa22.49■■□□□ 1.19
FGFR1-223ENST00000496296 LRIG3Q6UXM1 1119 aa22.49■■□□□ 1.19
FGFR1-223ENST00000496296 FAM76AQ8TAV0 307 aa22.49■■□□□ 1.19
FGFR1-223ENST00000496296 ZNF653Q96CK0 615 aa22.49■■□□□ 1.19
FGFR1-223ENST00000496296 SNX27Q96L92 541 aa22.49■■□□□ 1.19
FGFR1-223ENST00000496296 NUP85Q9BW27 656 aa22.49■■□□□ 1.19
FGFR1-223ENST00000496296 SENP6Q9GZR1 1112 aaPredicted RBP22.49■■□□□ 1.19
FGFR1-223ENST00000496296 XYLT2Q9H1B5 865 aa22.49■■□□□ 1.19
FGFR1-223ENST00000496296 ACP6Q9NPH0 428 aa22.49■■□□□ 1.19
FGFR1-223ENST00000496296 UMODL1Q5DID0 1318 aa22.49■■□□□ 1.19
FGFR1-223ENST00000496296 GOLGA6CA6NDK9 693 aa22.49■■□□□ 1.19
FGFR1-223ENST00000496296 CTSHP09668 335 aa22.49■■□□□ 1.19
FGFR1-223ENST00000496296 GOLGA6DP0CG33 693 aa22.49■■□□□ 1.19
FGFR1-223ENST00000496296 MYBL1P10243 752 aa22.49■■□□□ 1.19
FGFR1-223ENST00000496296 TWF2Q6IBS0 349 aaKnown RBP22.49■■□□□ 1.19
FGFR1-223ENST00000496296 LRRC45Q96CN5 670 aa22.49■■□□□ 1.19
FGFR1-223ENST00000496296 TRIM11Q96F44 468 aa22.49■■□□□ 1.19
FGFR1-223ENST00000496296 RUFY1Q96T51 708 aa22.49■■□□□ 1.19
FGFR1-223ENST00000496296 RAB17Q9H0T7 212 aa22.49■■□□□ 1.19
FGFR1-223ENST00000496296 NXF3Q9H4D5 531 aaKnown RBP22.49■■□□□ 1.19
FGFR1-223ENST00000496296 DPP3Q9NY33 737 aa22.49■■□□□ 1.19
FGFR1-223ENST00000496296 GOLGA6AQ9NYA3 693 aa22.49■■□□□ 1.19
FGFR1-223ENST00000496296 AMACRQ9UHK6 382 aa22.49■■□□□ 1.19
FGFR1-223ENST00000496296 SIX4Q9UIU6 781 aa22.49■■□□□ 1.19
FGFR1-223ENST00000496296 PCDHA3Q9Y5H8 950 aa22.49■■□□□ 1.19
FGFR1-223ENST00000496296 P4HA1P13674 534 aa22.48■■□□□ 1.19
FGFR1-223ENST00000496296 DRG2P55039 364 aaKnown RBP22.48■■□□□ 1.19
FGFR1-223ENST00000496296 RBP5P82980 135 aa22.48■■□□□ 1.19
FGFR1-223ENST00000496296 EMC10Q5UCC4 262 aa22.48■■□□□ 1.19
FGFR1-223ENST00000496296 TSPAN18Q96SJ8 248 aa22.48■■□□□ 1.19
FGFR1-223ENST00000496296 CHST12Q9NRB3 414 aa22.48■■□□□ 1.19
FGFR1-223ENST00000496296 GPR182O15218 404 aa22.47■■□□□ 1.19
FGFR1-223ENST00000496296 CHRNA1P02708 482 aa22.47■■□□□ 1.19
FGFR1-223ENST00000496296 CYP1A1P04798 512 aaPredicted RBP22.47■■□□□ 1.19
FGFR1-223ENST00000496296 SPDYCQ5MJ68 293 aa22.47■■□□□ 1.19
FGFR1-223ENST00000496296 SCARA3Q6AZY7 606 aa22.47■■□□□ 1.19
FGFR1-223ENST00000496296 TRIM72Q6ZMU5 477 aa22.47■■□□□ 1.19
FGFR1-223ENST00000496296 RBBP8NLQ8NC74 664 aaPredicted RBP22.47■■□□□ 1.19
FGFR1-223ENST00000496296 KRT35Q92764 455 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms