RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 MYL7Q01449 175 aa21.5■■□□□ 1.03
LMO4-204ENST00000495705 TFF2Q03403 129 aa21.5■■□□□ 1.03
LMO4-204ENST00000495705 SOWAHAQ2M3V2 549 aa21.5■■□□□ 1.03
LMO4-204ENST00000495705 LIN9Q5TKA1 542 aa21.5■■□□□ 1.03
LMO4-204ENST00000495705 LIMS2Q7Z4I7 341 aa21.5■■□□□ 1.03
LMO4-204ENST00000495705 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.5■■□□□ 1.03
LMO4-204ENST00000495705 SMRP1Q8NCR6 262 aa21.5■■□□□ 1.03
LMO4-204ENST00000495705 KREMEN2Q8NCW0 462 aa21.5■■□□□ 1.03
LMO4-204ENST00000495705 CCDC150Q8NCX0 1101 aa21.5■■□□□ 1.03
LMO4-204ENST00000495705 MMS19Q96T76 1030 aa21.5■■□□□ 1.03
LMO4-204ENST00000495705 MAFFQ9ULX9 164 aa21.5■■□□□ 1.03
LMO4-204ENST00000495705 WDR27A2RRH5 827 aa21.49■■□□□ 1.03
LMO4-204ENST00000495705 N4BP1O75113 896 aaKnown RBP21.49■■□□□ 1.03
LMO4-204ENST00000495705 ABLIM3O94929 683 aa21.49■■□□□ 1.03
LMO4-204ENST00000495705 ASS1P00966 412 aaKnown RBP21.49■■□□□ 1.03
LMO4-204ENST00000495705 LHX1P48742 406 aa21.49■■□□□ 1.03
LMO4-204ENST00000495705 RTL10Q7L3V2 364 aa21.49■■□□□ 1.03
LMO4-204ENST00000495705 FAM114A1Q8IWE2 563 aa21.49■■□□□ 1.03
LMO4-204ENST00000495705 TRIM59Q8IWR1 403 aa21.49■■□□□ 1.03
LMO4-204ENST00000495705 FBXL13Q8NEE6 735 aa21.49■■□□□ 1.03
LMO4-204ENST00000495705 TAS1R2Q8TE23 839 aa21.49■■□□□ 1.03
LMO4-204ENST00000495705 CNOT6LQ96LI5 555 aaKnown RBP21.49■■□□□ 1.03
LMO4-204ENST00000495705 THAP9Q9H5L6 903 aa21.49■■□□□ 1.03
LMO4-204ENST00000495705 AFF4Q9UHB7 1163 aaKnown RBP21.49■■□□□ 1.03
LMO4-204ENST00000495705 FAM50BQ9Y247 325 aa21.49■■□□□ 1.03
LMO4-204ENST00000495705 TACC1O75410 805 aa21.48■■□□□ 1.03
LMO4-204ENST00000495705 SPATA31D3P0C874 917 aa21.48■■□□□ 1.03
LMO4-204ENST00000495705 ATF2P15336 505 aa21.48■■□□□ 1.03
LMO4-204ENST00000495705 ITIH3Q06033 890 aa21.48■■□□□ 1.03
LMO4-204ENST00000495705 TYRO3Q06418 890 aa21.48■■□□□ 1.03
LMO4-204ENST00000495705 GPR17Q13304 367 aa21.48■■□□□ 1.03
LMO4-204ENST00000495705 SMAD4Q13485 552 aaKnown RBP21.48■■□□□ 1.03
LMO4-204ENST00000495705 CLUL1Q15846 466 aa21.48■■□□□ 1.03
LMO4-204ENST00000495705 SYCE2Q6PIF2 218 aa21.48■■□□□ 1.03
LMO4-204ENST00000495705 SPATA31D4Q6ZUB0 917 aa21.48■■□□□ 1.03
LMO4-204ENST00000495705 CCDC149Q6ZUS6 474 aa21.48■■□□□ 1.03
LMO4-204ENST00000495705 CMASQ8NFW8 434 aaPredicted RBP21.48■■□□□ 1.03
LMO4-204ENST00000495705 OR10T2Q8NGX3 314 aa21.48■■□□□ 1.03
LMO4-204ENST00000495705 RTP3Q9BQQ7 232 aa21.48■■□□□ 1.03
LMO4-204ENST00000495705 ZDHHC7Q9NXF8 308 aa21.48■■□□□ 1.03
LMO4-204ENST00000495705 DDX43Q9NXZ2 648 aaKnown RBP21.48■■□□□ 1.03
LMO4-204ENST00000495705 NXF1Q9UBU9 619 aaKnown RBP21.48■■□□□ 1.03
LMO4-204ENST00000495705 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.48■■□□□ 1.03
LMO4-204ENST00000495705 SPTBN5Q9NRC6 3674 aaKnown RBP21.48■■□□□ 1.03
LMO4-204ENST00000495705 GABRDO14764 452 aa21.47■■□□□ 1.03
LMO4-204ENST00000495705 PMM2O15305 246 aa21.47■■□□□ 1.03
LMO4-204ENST00000495705 WARSP23381 471 aaKnown RBP21.47■■□□□ 1.03
LMO4-204ENST00000495705 PCSK1P29120 753 aa21.47■■□□□ 1.03
LMO4-204ENST00000495705 ELF1P32519 619 aa21.47■■□□□ 1.03
LMO4-204ENST00000495705 FMO5P49326 533 aa21.47■■□□□ 1.03
LMO4-204ENST00000495705 TSPY1Q01534 308 aa21.47■■□□□ 1.03
LMO4-204ENST00000495705 SMARCB1Q12824 385 aa21.47■■□□□ 1.03
LMO4-204ENST00000495705 UVSSAQ2YD98 709 aa21.47■■□□□ 1.03
LMO4-204ENST00000495705 CBWD6Q4V339 395 aa21.47■■□□□ 1.03
LMO4-204ENST00000495705 CBWD3Q5JTY5 395 aa21.47■■□□□ 1.03
LMO4-204ENST00000495705 CBWD5Q5RIA9 395 aa21.47■■□□□ 1.03
LMO4-204ENST00000495705 CES5AQ6NT32 575 aa21.47■■□□□ 1.03
LMO4-204ENST00000495705 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.47■■□□□ 1.03
LMO4-204ENST00000495705 ENOX1Q8TC92 643 aaKnown RBP21.47■■□□□ 1.03
LMO4-204ENST00000495705 KBTBD7Q8WVZ9 684 aa21.47■■□□□ 1.03
LMO4-204ENST00000495705 ASB2Q96Q27 587 aa21.47■■□□□ 1.03
LMO4-204ENST00000495705 ACBD6Q9BR61 282 aa21.47■■□□□ 1.03
LMO4-204ENST00000495705 ZCWPW1Q9H0M4 648 aa21.47■■□□□ 1.03
LMO4-204ENST00000495705 RAB20Q9NX57 234 aa21.47■■□□□ 1.03
LMO4-204ENST00000495705 COQ4Q9Y3A0 265 aa21.47■■□□□ 1.03
LMO4-204ENST00000495705 P4HA2O15460 535 aa21.46■■□□□ 1.03
LMO4-204ENST00000495705 MBTPS2O43462 519 aa21.46■■□□□ 1.03
LMO4-204ENST00000495705 ZMYND10O75800 440 aa21.46■■□□□ 1.03
LMO4-204ENST00000495705 C8AP07357 584 aa21.46■■□□□ 1.03
LMO4-204ENST00000495705 HOXA9P31269 272 aa21.46■■□□□ 1.03
LMO4-204ENST00000495705 NOP14P78316 857 aaKnown RBP21.46■■□□□ 1.03
LMO4-204ENST00000495705 CETN1Q12798 172 aa21.46■■□□□ 1.03
LMO4-204ENST00000495705 RARS2Q5T160 578 aaKnown RBP21.46■■□□□ 1.03
LMO4-204ENST00000495705 PTCRAQ6ISU1 281 aaPredicted RBP21.46■■□□□ 1.03
LMO4-204ENST00000495705 CYP26C1Q6V0L0 522 aa21.46■■□□□ 1.03
LMO4-204ENST00000495705 C11orf57Q6ZUT1 292 aaPredicted RBP21.46■■□□□ 1.03
LMO4-204ENST00000495705 DCP1BQ8IZD4 617 aaKnown RBP21.46■■□□□ 1.03
LMO4-204ENST00000495705 FAXDC2Q96IV6 333 aa21.46■■□□□ 1.03
LMO4-204ENST00000495705 S1PR5Q9H228 398 aa21.46■■□□□ 1.03
LMO4-204ENST00000495705 ADAM7Q9H2U9 754 aa21.46■■□□□ 1.03
LMO4-204ENST00000495705 MAGEC2Q9UBF1 373 aaPredicted RBP21.46■■□□□ 1.03
LMO4-204ENST00000495705 XIRP2A4UGR9 3374 aa21.45■■□□□ 1.02
LMO4-204ENST00000495705 PAPLNO95428 1278 aa21.45■■□□□ 1.02
LMO4-204ENST00000495705 AFPP02771 609 aaKnown RBP21.45■■□□□ 1.02
LMO4-204ENST00000495705 HNRNPA1P09651 372 aaKnown RBP eCLIP21.45■■□□□ 1.02
LMO4-204ENST00000495705 OR4Q2P0C623 313 aa21.45■■□□□ 1.02
LMO4-204ENST00000495705 ADCY1Q08828 1119 aa21.45■■□□□ 1.02
LMO4-204ENST00000495705 KCNH2Q12809 1159 aa21.45■■□□□ 1.02
LMO4-204ENST00000495705 WDR44Q5JSH3 913 aa21.45■■□□□ 1.02
LMO4-204ENST00000495705 RNF19BQ6ZMZ0 732 aa21.45■■□□□ 1.02
LMO4-204ENST00000495705 OSTM1Q86WC4 334 aa21.45■■□□□ 1.02
LMO4-204ENST00000495705 IRF2BP1Q8IU81 584 aa21.45■■□□□ 1.02
LMO4-204ENST00000495705 TCEAL8Q8IYN2 117 aa21.45■■□□□ 1.02
LMO4-204ENST00000495705 SLC7A14Q8TBB6 771 aa21.45■■□□□ 1.02
LMO4-204ENST00000495705 C2orf15Q8WU43 125 aaKnown RBP21.45■■□□□ 1.02
LMO4-204ENST00000495705 TMEM209Q96SK2 561 aa21.45■■□□□ 1.02
LMO4-204ENST00000495705 RHOBTB2Q9BYZ6 727 aa21.45■■□□□ 1.02
LMO4-204ENST00000495705 NIF3L1Q9GZT8 377 aa21.45■■□□□ 1.02
LMO4-204ENST00000495705 NAT10Q9H0A0 1025 aaKnown RBP21.45■■□□□ 1.02
LMO4-204ENST00000495705 DNAJC25Q9H1X3 360 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms