RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 INCA1Q0VD86 236 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 PAK2Q13177 524 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 NNTQ13423 1086 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 CLUL1Q15846 466 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 CYP1B1Q16678 543 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 UBXN11Q5T124 520 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 DAB2IPQ5VWQ8 1189 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 NOTUMQ6P988 496 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 ADAT2Q7Z6V5 191 aaKnown RBP11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 SLC13A5Q86YT5 568 aaPredicted RBP11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 CD302Q8IX05 232 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 EIF1ADQ8N9N8 165 aaKnown RBP11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 TSEN2Q8NCE0 465 aaKnown RBP11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 TMEM35BQ8NCS4 154 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 CELF4Q9BZC1 486 aaKnown RBP11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 ZNF518BQ9C0D4 1074 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 NXF3Q9H4D5 531 aaKnown RBP11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 PLEKHA5Q9HAU0 1116 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 SNTG2Q9NY99 539 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 GABRQQ9UN88 632 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 AGAP1Q9UPQ3 857 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 DERAQ9Y315 318 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 SCINQ9Y6U3 715 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 THSD7BQ9C0I4 1608 aa11.29□□□□□ -0.6
PRPF4B-209ENST00000494674 TMEM191CA6NGB0 347 aa11.28□□□□□ -0.6
PRPF4B-209ENST00000494674 AGPSO00116 658 aa11.28□□□□□ -0.6
PRPF4B-209ENST00000494674 MYO1FO00160 1098 aa11.28□□□□□ -0.6
PRPF4B-209ENST00000494674 PPEF2O14830 753 aa11.28□□□□□ -0.6
PRPF4B-209ENST00000494674 PHF2O75151 1096 aa11.28□□□□□ -0.6
PRPF4B-209ENST00000494674 CALB1P05937 261 aa11.28□□□□□ -0.6
PRPF4B-209ENST00000494674 MAN1A1P33908 653 aa11.28□□□□□ -0.6
PRPF4B-209ENST00000494674 PTGIRP43119 386 aa11.28□□□□□ -0.6
PRPF4B-209ENST00000494674 GJA9P57773 515 aa11.28□□□□□ -0.6
PRPF4B-209ENST00000494674 TAS2R40P59535 323 aa11.28□□□□□ -0.6
PRPF4B-209ENST00000494674 RPL7AP62424 266 aaKnown RBP11.28□□□□□ -0.6
PRPF4B-209ENST00000494674 RBP5P82980 135 aa11.28□□□□□ -0.6
PRPF4B-209ENST00000494674 PTPN11Q06124 597 aaPredicted RBP11.28□□□□□ -0.6
PRPF4B-209ENST00000494674 ORC1Q13415 861 aa11.28□□□□□ -0.6
PRPF4B-209ENST00000494674 PTPN20Q4JDL3 420 aa11.28□□□□□ -0.6
PRPF4B-209ENST00000494674 TTC27Q6P3X3 843 aa11.28□□□□□ -0.6
PRPF4B-209ENST00000494674 KIF12Q96FN5 646 aa11.28□□□□□ -0.6
PRPF4B-209ENST00000494674 HHIPL1Q96JK4 782 aa11.28□□□□□ -0.6
PRPF4B-209ENST00000494674 HERPUD2Q9BSE4 406 aa11.28□□□□□ -0.6
PRPF4B-209ENST00000494674 KATNAL1Q9BW62 490 aa11.28□□□□□ -0.6
PRPF4B-209ENST00000494674 UPF3AQ9H1J1 476 aaKnown RBP11.28□□□□□ -0.6
PRPF4B-209ENST00000494674 NEUROG2Q9H2A3 272 aa11.28□□□□□ -0.6
PRPF4B-209ENST00000494674 LHX5Q9H2C1 402 aa11.28□□□□□ -0.6
PRPF4B-209ENST00000494674 MRPL47Q9HD33 250 aaKnown RBP11.28□□□□□ -0.6
PRPF4B-209ENST00000494674 PARVAQ9NVD7 372 aa11.28□□□□□ -0.6
PRPF4B-209ENST00000494674 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.28□□□□□ -0.6
PRPF4B-209ENST00000494674 CNTN3Q9P232 1028 aa11.28□□□□□ -0.6
PRPF4B-209ENST00000494674 TUBGCP4Q9UGJ1 667 aa11.28□□□□□ -0.6
PRPF4B-209ENST00000494674 HES2Q9Y543 173 aa11.28□□□□□ -0.6
PRPF4B-209ENST00000494674 CEP350Q5VT06 3117 aa11.27□□□□□ -0.6
PRPF4B-209ENST00000494674 C17orf102A2RUQ5 167 aa11.27□□□□□ -0.61
PRPF4B-209ENST00000494674 RECQL4O94761 1208 aa11.27□□□□□ -0.61
PRPF4B-209ENST00000494674 AXLP30530 894 aa11.27□□□□□ -0.61
PRPF4B-209ENST00000494674 NKX3-2P78367 333 aa11.27□□□□□ -0.61
PRPF4B-209ENST00000494674 LACTBP83111 547 aaPredicted RBP11.27□□□□□ -0.61
PRPF4B-209ENST00000494674 OGDHQ02218 1023 aa11.27□□□□□ -0.61
PRPF4B-209ENST00000494674 CUL1Q13616 776 aa11.27□□□□□ -0.61
PRPF4B-209ENST00000494674 PPP2R5EQ16537 467 aa11.27□□□□□ -0.61
PRPF4B-209ENST00000494674 SEL1L2Q5TEA6 688 aa11.27□□□□□ -0.61
PRPF4B-209ENST00000494674 DDX42Q86XP3 938 aaKnown RBP eCLIP11.27□□□□□ -0.61
PRPF4B-209ENST00000494674 MREGQ8N565 214 aa11.27□□□□□ -0.61
PRPF4B-209ENST00000494674 C12orf50Q8NA57 414 aaPredicted RBP11.27□□□□□ -0.61
PRPF4B-209ENST00000494674 FEZF2Q8TBJ5 459 aa11.27□□□□□ -0.61
PRPF4B-209ENST00000494674 IFT81Q8WYA0 676 aa11.27□□□□□ -0.61
PRPF4B-209ENST00000494674 ZBTB9Q96C00 473 aa11.27□□□□□ -0.61
PRPF4B-209ENST00000494674 TRIM51Q9BSJ1 452 aa11.27□□□□□ -0.61
PRPF4B-209ENST00000494674 FAM124BQ9H5Z6 455 aaPredicted RBP11.27□□□□□ -0.61
PRPF4B-209ENST00000494674 TJP2Q9UDY2 1190 aa11.27□□□□□ -0.61
PRPF4B-209ENST00000494674 NME7Q9Y5B8 376 aa11.27□□□□□ -0.61
PRPF4B-209ENST00000494674 GOLGA6L10A0A0M3HER8 536 aa11.26□□□□□ -0.61
PRPF4B-209ENST00000494674 FSCN2O14926 492 aa11.26□□□□□ -0.61
PRPF4B-209ENST00000494674 TLR3O15455 904 aaKnown RBP11.26□□□□□ -0.61
PRPF4B-209ENST00000494674 PSTPIP1O43586 416 aa11.26□□□□□ -0.61
PRPF4B-209ENST00000494674 SYF2O95926 243 aaKnown RBP11.26□□□□□ -0.61
PRPF4B-209ENST00000494674 RARAP10276 462 aa11.26□□□□□ -0.61
PRPF4B-209ENST00000494674 CD19P15391 556 aa11.26□□□□□ -0.61
PRPF4B-209ENST00000494674 CYP3A5P20815 502 aa11.26□□□□□ -0.61
PRPF4B-209ENST00000494674 PSMC4P43686 418 aa11.26□□□□□ -0.61
PRPF4B-209ENST00000494674 CRYBB1P53674 252 aaPredicted RBP11.26□□□□□ -0.61
PRPF4B-209ENST00000494674 FCGRTP55899 365 aa11.26□□□□□ -0.61
PRPF4B-209ENST00000494674 GSCP56915 257 aaPredicted RBP11.26□□□□□ -0.61
PRPF4B-209ENST00000494674 GABPB1Q06547 395 aaPredicted RBP11.26□□□□□ -0.61
PRPF4B-209ENST00000494674 TRIM32Q13049 653 aa11.26□□□□□ -0.61
PRPF4B-209ENST00000494674 XKR4Q5GH76 650 aa11.26□□□□□ -0.61
PRPF4B-209ENST00000494674 CYP4A22Q5TCH4 519 aa11.26□□□□□ -0.61
PRPF4B-209ENST00000494674 MAATS1Q7Z4T9 603 aa11.26□□□□□ -0.61
PRPF4B-209ENST00000494674 APBB1IPQ7Z5R6 666 aaPredicted RBP11.26□□□□□ -0.61
PRPF4B-209ENST00000494674 C3orf20Q8ND61 904 aa11.26□□□□□ -0.61
PRPF4B-209ENST00000494674 CCDC26Q8TAB7 109 aa11.26□□□□□ -0.61
PRPF4B-209ENST00000494674 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.26□□□□□ -0.61
PRPF4B-209ENST00000494674 C18orf25Q96B23 403 aaPredicted RBP11.26□□□□□ -0.61
PRPF4B-209ENST00000494674 C18orf8Q96DM3 657 aa11.26□□□□□ -0.61
PRPF4B-209ENST00000494674 TMEM176AQ96HP8 235 aa11.26□□□□□ -0.61
PRPF4B-209ENST00000494674 PCYOX1Q9UHG3 505 aa11.26□□□□□ -0.61
PRPF4B-209ENST00000494674 ABT1Q9ULW3 272 aaKnown RBP11.26□□□□□ -0.61
PRPF4B-209ENST00000494674 BARX2Q9UMQ3 279 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms