RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 LRRC8EQ6NSJ5 796 aa20.03■□□□□ 0.8
COL27A1-207ENST00000494090 COL23A1Q86Y22 540 aaPredicted RBP20.03■□□□□ 0.8
COL27A1-207ENST00000494090 TTC30BQ8N4P2 665 aa20.03■□□□□ 0.8
COL27A1-207ENST00000494090 GPRC5AQ8NFJ5 357 aa20.03■□□□□ 0.8
COL27A1-207ENST00000494090 RGS7P49802 495 aa20.03■□□□□ 0.8
COL27A1-207ENST00000494090 GJB7Q6PEY0 223 aa20.03■□□□□ 0.8
COL27A1-207ENST00000494090 MOXD1Q6UVY6 613 aa20.03■□□□□ 0.8
COL27A1-207ENST00000494090 C3orf62Q6ZUJ4 267 aa20.03■□□□□ 0.8
COL27A1-207ENST00000494090 CASKIN2Q8WXE0 1202 aa20.03■□□□□ 0.8
COL27A1-207ENST00000494090 ERP27Q96DN0 273 aa20.03■□□□□ 0.8
COL27A1-207ENST00000494090 RUBCNLQ9H714 662 aa20.03■□□□□ 0.8
COL27A1-207ENST00000494090 TRIM66O15016 1216 aa20.03■□□□□ 0.8
COL27A1-207ENST00000494090 CCND1P24385 295 aa20.03■□□□□ 0.8
COL27A1-207ENST00000494090 PON1P27169 355 aa20.03■□□□□ 0.8
COL27A1-207ENST00000494090 SEC24CP53992 1094 aa20.03■□□□□ 0.8
COL27A1-207ENST00000494090 LAMC2Q13753 1193 aa20.03■□□□□ 0.8
COL27A1-207ENST00000494090 EFHC1Q5JVL4 640 aa20.03■□□□□ 0.8
COL27A1-207ENST00000494090 TTI2Q6NXR4 508 aa20.03■□□□□ 0.8
COL27A1-207ENST00000494090 SLC13A5Q86YT5 568 aaPredicted RBP20.03■□□□□ 0.8
COL27A1-207ENST00000494090 AGR3Q8TD06 166 aa20.03■□□□□ 0.8
COL27A1-207ENST00000494090 SERPINB12Q96P63 405 aa20.03■□□□□ 0.8
COL27A1-207ENST00000494090 KCNH7Q9NS40 1196 aa20.03■□□□□ 0.8
COL27A1-207ENST00000494090 EEF2KO00418 725 aaKnown RBP20.02■□□□□ 0.8
COL27A1-207ENST00000494090 TLR2O60603 784 aa20.02■□□□□ 0.8
COL27A1-207ENST00000494090 ZSWIM1Q9BR11 485 aa20.02■□□□□ 0.8
COL27A1-207ENST00000494090 ADAM33Q9BZ11 813 aa20.02■□□□□ 0.8
COL27A1-207ENST00000494090 SNRPAP09012 282 aaKnown RBP20.02■□□□□ 0.8
COL27A1-207ENST00000494090 KCNJ1P48048 391 aa20.02■□□□□ 0.8
COL27A1-207ENST00000494090 KRT72Q14CN4 511 aa20.02■□□□□ 0.8
COL27A1-207ENST00000494090 ACAD10Q6JQN1 1059 aa20.02■□□□□ 0.8
COL27A1-207ENST00000494090 C3orf20Q8ND61 904 aa20.02■□□□□ 0.8
COL27A1-207ENST00000494090 CHMP2BQ9UQN3 213 aa20.02■□□□□ 0.8
COL27A1-207ENST00000494090 MSH4O15457 936 aa20.02■□□□□ 0.8
COL27A1-207ENST00000494090 RALBP11234 206 aa20.02■□□□□ 0.8
COL27A1-207ENST00000494090 ZNF157P51786 506 aaPredicted RBP20.02■□□□□ 0.8
COL27A1-207ENST00000494090 PRUNE1Q86TP1 453 aa20.02■□□□□ 0.8
COL27A1-207ENST00000494090 GPRASP2Q96D09 838 aa20.02■□□□□ 0.8
COL27A1-207ENST00000494090 RMDN2Q96LZ7 410 aa20.02■□□□□ 0.8
COL27A1-207ENST00000494090 NIF3L1Q9GZT8 377 aa20.02■□□□□ 0.8
COL27A1-207ENST00000494090 GOLPH3Q9H4A6 298 aa20.02■□□□□ 0.8
COL27A1-207ENST00000494090 TRPC7Q9HCX4 862 aa20.02■□□□□ 0.8
COL27A1-207ENST00000494090 ARHGEF38Q9NXL2 777 aa20.02■□□□□ 0.8
COL27A1-207ENST00000494090 NRXN1Q9ULB1 1477 aa20.02■□□□□ 0.8
COL27A1-207ENST00000494090 A0A087X0T9 212 aa20.02■□□□□ 0.79
COL27A1-207ENST00000494090 CFAP99D6REC4 459 aa20.02■□□□□ 0.79
COL27A1-207ENST00000494090 ANGPT2O15123 496 aa20.02■□□□□ 0.79
COL27A1-207ENST00000494090 FAM228BP0C875 321 aa20.02■□□□□ 0.79
COL27A1-207ENST00000494090 PLA2G4AP47712 749 aa20.02■□□□□ 0.79
COL27A1-207ENST00000494090 CCDC15Q0P6D6 951 aa20.02■□□□□ 0.79
COL27A1-207ENST00000494090 FLOT2Q14254 428 aa20.02■□□□□ 0.79
COL27A1-207ENST00000494090 THAP2Q9H0W7 228 aa20.02■□□□□ 0.79
COL27A1-207ENST00000494090 NDUFS3O75489 264 aa20.01■□□□□ 0.79
COL27A1-207ENST00000494090 DGKDQ16760 1214 aa20.01■□□□□ 0.79
COL27A1-207ENST00000494090 SYCP2LQ5T4T6 812 aa20.01■□□□□ 0.79
COL27A1-207ENST00000494090 DDX53Q86TM3 631 aaKnown RBP20.01■□□□□ 0.79
COL27A1-207ENST00000494090 AGBL3Q8NEM8 1001 aa20.01■□□□□ 0.79
COL27A1-207ENST00000494090 LBHD1Q9BQE6 289 aaPredicted RBP20.01■□□□□ 0.79
COL27A1-207ENST00000494090 FRMD8Q9BZ67 464 aaPredicted RBP20.01■□□□□ 0.79
COL27A1-207ENST00000494090 BATF3Q9NR55 127 aa20.01■□□□□ 0.79
COL27A1-207ENST00000494090 CDV3Q9UKY7 258 aaKnown RBP20.01■□□□□ 0.79
COL27A1-207ENST00000494090 KLHL2O95198 593 aa20.01■□□□□ 0.79
COL27A1-207ENST00000494090 ASMTLO95671 621 aa20.01■□□□□ 0.79
COL27A1-207ENST00000494090 WEE2P0C1S8 567 aa20.01■□□□□ 0.79
COL27A1-207ENST00000494090 CPT1AP50416 773 aa20.01■□□□□ 0.79
COL27A1-207ENST00000494090 CACNB2Q08289 660 aaPredicted RBP20.01■□□□□ 0.79
COL27A1-207ENST00000494090 ITPK1Q13572 414 aa20.01■□□□□ 0.79
COL27A1-207ENST00000494090 ANGEL2Q5VTE6 544 aaKnown RBP20.01■□□□□ 0.79
COL27A1-207ENST00000494090 CDKAL1Q5VV42 579 aa20.01■□□□□ 0.79
COL27A1-207ENST00000494090 SPATA18Q8TC71 538 aa20.01■□□□□ 0.79
COL27A1-207ENST00000494090 CNTNAP4Q9C0A0 1308 aa20.01■□□□□ 0.79
COL27A1-207ENST00000494090 CYP2C8P10632 490 aa20.01■□□□□ 0.79
COL27A1-207ENST00000494090 CYP2C9P11712 490 aa20.01■□□□□ 0.79
COL27A1-207ENST00000494090 KRT4P19013 534 aa20.01■□□□□ 0.79
COL27A1-207ENST00000494090 NPEPPSP55786 919 aa20.01■□□□□ 0.79
COL27A1-207ENST00000494090 INPP5AQ14642 412 aa20.01■□□□□ 0.79
COL27A1-207ENST00000494090 MAPRE1Q15691 268 aaKnown RBP20.01■□□□□ 0.79
COL27A1-207ENST00000494090 GRAMD4Q6IC98 578 aa20.01■□□□□ 0.79
COL27A1-207ENST00000494090 PPIL6Q8IXY8 311 aa20.01■□□□□ 0.79
COL27A1-207ENST00000494090 SPATA31A1Q5TZJ5 1347 aa20.01■□□□□ 0.79
COL27A1-207ENST00000494090 UBE2Q2LH0YL09 131 aa20.01■□□□□ 0.79
COL27A1-207ENST00000494090 MUTP22033 750 aa20.01■□□□□ 0.79
COL27A1-207ENST00000494090 TTC39BQ5VTQ0 682 aaPredicted RBP20.01■□□□□ 0.79
COL27A1-207ENST00000494090 GPAT2Q6NUI2 795 aa20.01■□□□□ 0.79
COL27A1-207ENST00000494090 TRIM65Q6PJ69 517 aa20.01■□□□□ 0.79
COL27A1-207ENST00000494090 STX19Q8N4C7 294 aa20.01■□□□□ 0.79
COL27A1-207ENST00000494090 SLC16A10Q8TF71 515 aa20.01■□□□□ 0.79
COL27A1-207ENST00000494090 CST8O60676 142 aa20■□□□□ 0.79
COL27A1-207ENST00000494090 FOXD4Q12950 439 aaPredicted RBP20■□□□□ 0.79
COL27A1-207ENST00000494090 MAPK7Q13164 816 aa20■□□□□ 0.79
COL27A1-207ENST00000494090 ARHGEF7Q14155 803 aa20■□□□□ 0.79
COL27A1-207ENST00000494090 SKIV2LQ15477 1246 aaKnown RBP20■□□□□ 0.79
COL27A1-207ENST00000494090 C16orf87Q6PH81 154 aa20■□□□□ 0.79
COL27A1-207ENST00000494090 ANKRD13AQ8IZ07 590 aa20■□□□□ 0.79
COL27A1-207ENST00000494090 DACH2Q96NX9 599 aa20■□□□□ 0.79
COL27A1-207ENST00000494090 GGA3Q9NZ52 723 aa20■□□□□ 0.79
COL27A1-207ENST00000494090 SLC4A7Q9Y6M7 1214 aa20■□□□□ 0.79
COL27A1-207ENST00000494090 RGS4P49798 205 aa20■□□□□ 0.79
COL27A1-207ENST00000494090 CORO7P57737 925 aa20■□□□□ 0.79
COL27A1-207ENST00000494090 NOTUMQ6P988 496 aa20■□□□□ 0.79
COL27A1-207ENST00000494090 ZNF512Q96ME7 567 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms