RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 NPC1O15118 1278 aa7.29□□□□□ -1.24
SMC2-205ENST00000493955 B4GALT3O60512 393 aa7.29□□□□□ -1.24
SMC2-205ENST00000493955 VEGFAP15692 232 aaPredicted RBP7.29□□□□□ -1.24
SMC2-205ENST00000493955 IL1R2P27930 398 aa7.29□□□□□ -1.24
SMC2-205ENST00000493955 LINC00310P59036 64 aa7.29□□□□□ -1.24
SMC2-205ENST00000493955 AMOTQ4VCS5 1084 aa7.29□□□□□ -1.24
SMC2-205ENST00000493955 FKBP15Q5T1M5 1219 aa7.29□□□□□ -1.24
SMC2-205ENST00000493955 ZFYVE27Q5T4F4 411 aa7.29□□□□□ -1.24
SMC2-205ENST00000493955 FAM83AQ86UY5 434 aa7.29□□□□□ -1.24
SMC2-205ENST00000493955 FITM2Q8N6M3 262 aa7.29□□□□□ -1.24
SMC2-205ENST00000493955 VGLL2Q8N8G2 317 aa7.29□□□□□ -1.24
SMC2-205ENST00000493955 TP53I13Q8NBR0 393 aaPredicted RBP7.29□□□□□ -1.24
SMC2-205ENST00000493955 DNERQ8NFT8 737 aa7.29□□□□□ -1.24
SMC2-205ENST00000493955 TBC1D20Q96BZ9 403 aa7.29□□□□□ -1.24
SMC2-205ENST00000493955 KLHL32Q96NJ5 620 aa7.29□□□□□ -1.24
SMC2-205ENST00000493955 GDF15Q99988 308 aa7.29□□□□□ -1.24
SMC2-205ENST00000493955 PAGR1Q9BTK6 254 aa7.29□□□□□ -1.24
SMC2-205ENST00000493955 SPATA5L1Q9BVQ7 753 aa7.29□□□□□ -1.24
SMC2-205ENST00000493955 MS4A7Q9GZW8 240 aaPredicted RBP7.29□□□□□ -1.24
SMC2-205ENST00000493955 MAGEH1Q9H213 219 aa7.29□□□□□ -1.24
SMC2-205ENST00000493955 TBC1D23Q9NUY8 699 aa7.29□□□□□ -1.24
SMC2-205ENST00000493955 DACT1Q9NYF0 836 aa7.29□□□□□ -1.24
SMC2-205ENST00000493955 C9orf78Q9NZ63 289 aaPredicted RBP7.29□□□□□ -1.24
SMC2-205ENST00000493955 XPR1Q9UBH6 696 aa7.29□□□□□ -1.24
SMC2-205ENST00000493955 ZNF69Q9UC07 566 aa7.29□□□□□ -1.24
SMC2-205ENST00000493955 MID2Q9UJV3 735 aa7.29□□□□□ -1.24
SMC2-205ENST00000493955 HDAC9Q9UKV0 1011 aa7.29□□□□□ -1.24
SMC2-205ENST00000493955 PRR5-ARHGAP8B1AHC4 643 aa7.28□□□□□ -1.24
SMC2-205ENST00000493955 M0R3H8 397 aa7.28□□□□□ -1.24
SMC2-205ENST00000493955 ACKR2O00590 384 aa7.28□□□□□ -1.24
SMC2-205ENST00000493955 CDC14BO60729 498 aa7.28□□□□□ -1.24
SMC2-205ENST00000493955 NDST3O95803 873 aa7.28□□□□□ -1.24
SMC2-205ENST00000493955 CR2P20023 1033 aa7.28□□□□□ -1.24
SMC2-205ENST00000493955 FOXO1Q12778 655 aa7.28□□□□□ -1.24
SMC2-205ENST00000493955 PRKG1Q13976 671 aa7.28□□□□□ -1.24
SMC2-205ENST00000493955 SPARCL1Q14515 664 aa7.28□□□□□ -1.24
SMC2-205ENST00000493955 FAM160B1Q5W0V3 765 aa7.28□□□□□ -1.24
SMC2-205ENST00000493955 MFSD5Q6N075 450 aa7.28□□□□□ -1.24
SMC2-205ENST00000493955 BORAQ6PGQ7 559 aa7.28□□□□□ -1.24
SMC2-205ENST00000493955 GPRIN1Q7Z2K8 1008 aa7.28□□□□□ -1.24
SMC2-205ENST00000493955 ANKRD18AQ8IVF6 992 aa7.28□□□□□ -1.24
SMC2-205ENST00000493955 RNF169Q8NCN4 708 aa7.28□□□□□ -1.24
SMC2-205ENST00000493955 CCDC150Q8NCX0 1101 aa7.28□□□□□ -1.24
SMC2-205ENST00000493955 SLC17A8Q8NDX2 589 aa7.28□□□□□ -1.24
SMC2-205ENST00000493955 TBC1D15Q8TC07 691 aa7.28□□□□□ -1.24
SMC2-205ENST00000493955 CNPPD1Q9BV87 410 aa7.28□□□□□ -1.24
SMC2-205ENST00000493955 IMPG2Q9BZV3 1241 aa7.28□□□□□ -1.24
SMC2-205ENST00000493955 NELFAQ9H3P2 528 aa7.28□□□□□ -1.24
SMC2-205ENST00000493955 NECTIN3Q9NQS3 549 aa7.28□□□□□ -1.24
SMC2-205ENST00000493955 E9PLN8 166 aa7.27□□□□□ -1.24
SMC2-205ENST00000493955 INMTO95050 263 aa7.27□□□□□ -1.24
SMC2-205ENST00000493955 ITGB1P05556 798 aa7.27□□□□□ -1.24
SMC2-205ENST00000493955 C1QTNF9P0C862 333 aa7.27□□□□□ -1.24
SMC2-205ENST00000493955 DHRS4L1P0CG22 281 aa7.27□□□□□ -1.24
SMC2-205ENST00000493955 GNAT2P19087 354 aa7.27□□□□□ -1.24
SMC2-205ENST00000493955 SLC6A2P23975 617 aa7.27□□□□□ -1.24
SMC2-205ENST00000493955 WNT3P56703 355 aa7.27□□□□□ -1.24
SMC2-205ENST00000493955 TCF15Q12870 199 aa7.27□□□□□ -1.24
SMC2-205ENST00000493955 RAB30Q15771 203 aa7.27□□□□□ -1.24
SMC2-205ENST00000493955 EFCAB12Q6NXP0 572 aa7.27□□□□□ -1.24
SMC2-205ENST00000493955 PPP1R32Q7Z5V6 425 aa7.27□□□□□ -1.24
SMC2-205ENST00000493955 PLEKHH3Q7Z736 793 aa7.27□□□□□ -1.24
SMC2-205ENST00000493955 TMEM151BQ8IW70 566 aa7.27□□□□□ -1.24
SMC2-205ENST00000493955 FAM46DQ8NEK8 389 aa7.27□□□□□ -1.24
SMC2-205ENST00000493955 VKORC1Q9BQB6 163 aa7.27□□□□□ -1.24
SMC2-205ENST00000493955 USP40Q9NVE5 1235 aa7.27□□□□□ -1.24
SMC2-205ENST00000493955 PGAP2Q9UHJ9 254 aa7.27□□□□□ -1.24
SMC2-205ENST00000493955 CLCA2Q9UQC9 943 aa7.27□□□□□ -1.24
SMC2-205ENST00000493955 FARP2O94887 1054 aaPredicted RBP7.27□□□□□ -1.25
SMC2-205ENST00000493955 KIF20AO95235 890 aa7.27□□□□□ -1.25
SMC2-205ENST00000493955 A1BGP04217 495 aa7.27□□□□□ -1.25
SMC2-205ENST00000493955 XRCC6P12956 609 aaKnown RBP eCLIP7.27□□□□□ -1.25
SMC2-205ENST00000493955 ACVR2AP27037 513 aa7.27□□□□□ -1.25
SMC2-205ENST00000493955 GABRB3P28472 473 aa7.27□□□□□ -1.25
SMC2-205ENST00000493955 SERPINF1P36955 418 aa7.27□□□□□ -1.25
SMC2-205ENST00000493955 VIPR2P41587 438 aa7.27□□□□□ -1.25
SMC2-205ENST00000493955 MAPK9P45984 424 aa7.27□□□□□ -1.25
SMC2-205ENST00000493955 COPAP53621 1224 aa7.27□□□□□ -1.25
SMC2-205ENST00000493955 ITGA8P53708 1063 aa7.27□□□□□ -1.25
SMC2-205ENST00000493955 PTTG1IPP53801 180 aa7.27□□□□□ -1.25
SMC2-205ENST00000493955 SLURP1P55000 103 aa7.27□□□□□ -1.25
SMC2-205ENST00000493955 KCNA10Q16322 511 aa7.27□□□□□ -1.25
SMC2-205ENST00000493955 MMS22LQ6ZRQ5 1243 aa7.27□□□□□ -1.25
SMC2-205ENST00000493955 KRT28Q7Z3Y7 464 aa7.27□□□□□ -1.25
SMC2-205ENST00000493955 TEX19Q8NA77 164 aa7.27□□□□□ -1.25
SMC2-205ENST00000493955 GLIS1Q8NBF1 620 aa7.27□□□□□ -1.25
SMC2-205ENST00000493955 PDPRQ8NCN5 879 aa7.27□□□□□ -1.25
SMC2-205ENST00000493955 FAM71BQ8TC56 605 aa7.27□□□□□ -1.25
SMC2-205ENST00000493955 IPO4Q8TEX9 1081 aaKnown RBP7.27□□□□□ -1.25
SMC2-205ENST00000493955 ZNF384Q8TF68 577 aa7.27□□□□□ -1.25
SMC2-205ENST00000493955 RAPGEF4Q8WZA2 1011 aa7.27□□□□□ -1.25
SMC2-205ENST00000493955 LMF1Q96S06 567 aa7.27□□□□□ -1.25
SMC2-205ENST00000493955 CPPED1Q9BRF8 314 aaPredicted RBP7.27□□□□□ -1.25
SMC2-205ENST00000493955 SEC61A2Q9H9S3 476 aa7.27□□□□□ -1.25
SMC2-205ENST00000493955 SPON1Q9HCB6 807 aa7.27□□□□□ -1.25
SMC2-205ENST00000493955 HEYLQ9NQ87 328 aaPredicted RBP7.27□□□□□ -1.25
SMC2-205ENST00000493955 RGL1Q9NZL6 768 aa7.27□□□□□ -1.25
SMC2-205ENST00000493955 A0A087WZ62 844 aa7.26□□□□□ -1.25
SMC2-205ENST00000493955 AQP12BA6NM10 295 aa7.26□□□□□ -1.25
SMC2-205ENST00000493955 TSPAN15O95858 294 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms