RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 WEE2P0C1S8 567 aa12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 IGFBP4P22692 258 aa12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 WARSP23381 471 aaKnown RBP12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 LMO2P25791 158 aa12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 CA8P35219 290 aa12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 TPM4P67936 248 aa12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 YWHAHQ04917 246 aaPredicted RBP12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 PTPN21Q16825 1174 aa12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 EXOC3L4Q17RC7 722 aa12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 CCDC142Q17RM4 750 aa12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 CTXN3Q4LDR2 81 aa12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 TCEAL5Q5H9L2 206 aa12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 WDR44Q5JSH3 913 aa12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 PDE12Q6L8Q7 609 aaKnown RBP12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 PHLDB3Q6NSJ2 640 aa12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 TRIM65Q6PJ69 517 aa12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 ANKS3Q6ZW76 656 aa12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 DPH6Q7L8W6 267 aa12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 TMEM86AQ8N2M4 240 aa12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 UBR7Q8N806 425 aa12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 ANKRD20A12PQ8NF67 263 aa12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 IMPG2Q9BZV3 1241 aa12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 LMCD1Q9NZU5 365 aa12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 FNIP2Q9P278 1114 aa12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 HMGXB4Q9UGU5 601 aa12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 AJAP1Q9UKB5 411 aaPredicted RBP12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 DSEQ9UL01 958 aa12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 SIK3Q9Y2K2 1263 aa12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 BACE2Q9Y5Z0 518 aa12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 ATG2AQ2TAZ0 1938 aa12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 MYO9BQ13459 2157 aa12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 TSC2P49815 1807 aa12.97□□□□□ -0.33
RHBDF1-211ENST00000493647 A0A1B0GTH6 734 aa12.96□□□□□ -0.33
RHBDF1-211ENST00000493647 H7C4K7 107 aa12.96□□□□□ -0.33
RHBDF1-211ENST00000493647 PER2O15055 1255 aa12.96□□□□□ -0.33
RHBDF1-211ENST00000493647 AP5Z1O43299 807 aa12.96□□□□□ -0.33
RHBDF1-211ENST00000493647 CLASP2O75122 1294 aaKnown RBP12.96□□□□□ -0.33
RHBDF1-211ENST00000493647 OR4Q2P0C623 313 aa12.96□□□□□ -0.33
RHBDF1-211ENST00000493647 ACAT1P24752 427 aaKnown RBP12.96□□□□□ -0.33
RHBDF1-211ENST00000493647 GTF2F1P35269 517 aaKnown RBP eCLIP12.96□□□□□ -0.33
RHBDF1-211ENST00000493647 HYAL1Q12794 435 aa12.96□□□□□ -0.33
RHBDF1-211ENST00000493647 CETN1Q12798 172 aa12.96□□□□□ -0.33
RHBDF1-211ENST00000493647 CUL2Q13617 745 aa12.96□□□□□ -0.33
RHBDF1-211ENST00000493647 ZNF280DQ6N043 979 aa12.96□□□□□ -0.33
RHBDF1-211ENST00000493647 RBM23Q86U06 439 aaKnown RBP12.96□□□□□ -0.33
RHBDF1-211ENST00000493647 METTL23Q86XA0 190 aa12.96□□□□□ -0.33
RHBDF1-211ENST00000493647 GLYCTKQ8IVS8 523 aa12.96□□□□□ -0.33
RHBDF1-211ENST00000493647 CCDC150Q8NCX0 1101 aa12.96□□□□□ -0.33
RHBDF1-211ENST00000493647 WHAMMQ8TF30 809 aa12.96□□□□□ -0.33
RHBDF1-211ENST00000493647 KREMEN1Q96MU8 473 aa12.96□□□□□ -0.33
RHBDF1-211ENST00000493647 NT5C1BQ96P26 610 aa12.96□□□□□ -0.33
RHBDF1-211ENST00000493647 GAS2L1Q99501 681 aaPredicted RBP12.96□□□□□ -0.33
RHBDF1-211ENST00000493647 LPIN3Q9BQK8 851 aa12.96□□□□□ -0.33
RHBDF1-211ENST00000493647 LSM14BQ9BX40 385 aaKnown RBP12.96□□□□□ -0.33
RHBDF1-211ENST00000493647 NSUN3Q9H649 340 aaKnown RBP12.96□□□□□ -0.33
RHBDF1-211ENST00000493647 CDY1Q9Y6F8 540 aa12.96□□□□□ -0.33
RHBDF1-211ENST00000493647 PRRC2BQ5JSZ5 2229 aaKnown RBP12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 ARHGEF37A1IGU5 675 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 EPHB6O15197 1021 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 ATP2C2O75185 946 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 VNN2O95498 520 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 TPM2P07951 284 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 PDGFRBP09619 1106 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 FAM163BP0C2L3 166 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 P4HA1P13674 534 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 ACO1P21399 889 aaKnown RBP12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 OR1D2P34982 312 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 NRIP1P48552 1158 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 CDR1P51861 262 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 RBM10P98175 930 aaKnown RBP12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 UBXN1Q04323 297 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 ORC1Q13415 861 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 NR1I3Q14994 352 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 SYCP1Q15431 976 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 DUSP6Q16828 381 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 FKBP15Q5T1M5 1219 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 SLC8B1Q6J4K2 584 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 PDXDC1Q6P996 788 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 RRAGAQ7L523 313 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 LRRTM3Q86VH5 581 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 VN1R2Q8NFZ6 395 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 OR6B3Q8NGW1 331 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 SPATA18Q8TC71 538 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 SLC22A17Q8WUG5 538 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 FAXDC2Q96IV6 333 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 ERGIC2Q96RQ1 377 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 TWNKQ96RR1 684 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 PKMYT1Q99640 499 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 ZCWPW1Q9H0M4 648 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 GANQ9H2C0 597 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 DPEP3Q9H4B8 488 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 CYP3A43Q9HB55 503 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 TMLHEQ9NVH6 421 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 DDX43Q9NXZ2 648 aaKnown RBP12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 IFNKQ9P0W0 207 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 SSX2IPQ9Y2D8 614 aa12.95□□□□□ -0.34
RHBDF1-211ENST00000493647 TRANK1O15050 2925 aa12.94□□□□□ -0.34
RHBDF1-211ENST00000493647 WDR27A2RRH5 827 aa12.94□□□□□ -0.34
RHBDF1-211ENST00000493647 OR6C75A6NL08 312 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms