RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 SIX4Q9UIU6 781 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 FBXL5Q9UKA1 691 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 MAFFQ9ULX9 164 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 BARX2Q9UMQ3 279 aaPredicted RBP8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 POLIQ9UNA4 740 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 PTPRJQ12913 1337 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 A8MXQ7 604 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 SPTLC1O15269 473 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 LINC01565O15544 149 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 TGM5O43548 720 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 LILRB3O75022 631 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 OAZ2O95190 189 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 STAU1O95793 577 aaKnown RBP8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 CST3P01034 146 aaPredicted RBP8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 C4BPAP04003 597 aaKnown RBP8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 CYP11A1P05108 521 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 SPATA31D3P0C874 917 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 PRKCSHP14314 528 aaPredicted RBP8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 EPCAMP16422 314 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 GNL1P36915 607 aaPredicted RBP8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 MTHFRP42898 656 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 ALDH1A3P47895 512 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 CLDN10P78369 228 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 TYRO3Q06418 890 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 RAB33AQ14088 237 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 NFE2Q16621 373 aaPredicted RBP8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 UVSSAQ2YD98 709 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 SLC39A12Q504Y0 691 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 ATAT1Q5SQI0 421 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 RARS2Q5T160 578 aaKnown RBP8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 WSCD1Q658N2 575 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 CD300LGQ6UXG3 332 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 C4orf50Q6ZRC1 276 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 RBM43Q6ZSC3 357 aaKnown RBP8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 SPATA31D4Q6ZUB0 917 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 RTL10Q7L3V2 364 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 ZC3H3Q8IXZ2 948 aaKnown RBP8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 PDCL2Q8N4E4 241 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 TTC39CQ8N584 583 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 ZNF461Q8TAF7 563 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 FAM200AQ8TCP9 573 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 C2orf15Q8WU43 125 aaKnown RBP8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 DUSP9Q99956 384 aaKnown RBP8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 CLSTN3Q9BQT9 956 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 APOL5Q9BWW9 433 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 CYP4F11Q9HBI6 524 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 RAB20Q9NX57 234 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 ATP8B3O60423 1300 aa8.71□□□□□ -1.02
TM4SF1-204ENST00000493348 TSC2P49815 1807 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 CCDC195A0A1B0GUA6 201 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 SYCE3A1L190 88 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 P4HA2O15460 535 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 CAVIN2O95810 425 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 EFEMP2O95967 443 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 C8AP07357 584 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 PDGFRBP09619 1106 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 FAM163BP0C2L3 166 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 FMO5P49326 533 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 TUFMP49411 452 aaKnown RBP8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 NOP14P78316 857 aaKnown RBP8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 ROR1Q01973 937 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 MYL5Q02045 173 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 PPP3CAQ08209 521 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 ADCY1Q08828 1119 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 KCNH2Q12809 1159 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 GPR17Q13304 367 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 SMAD4Q13485 552 aaKnown RBP8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 VEPH1Q14D04 833 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 CTC1Q2NKJ3 1217 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 LEXMQ3ZCV2 418 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 ANO6Q4KMQ2 910 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 IQCEQ6IPM2 695 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 PTCRAQ6ISU1 281 aaPredicted RBP8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 SLC8B1Q6J4K2 584 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 TMC5Q6UXY8 1006 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 CYP26C1Q6V0L0 522 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 TMEM184AQ6ZMB5 413 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 SPATA2LQ8IUW3 424 aaPredicted RBP8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 TMEM130Q8N3G9 435 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 SLC7A14Q8TBB6 771 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 ENOX1Q8TC92 643 aaKnown RBP8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 SPPL2BQ8TCT7 592 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 PLEKHO2Q8TD55 490 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 ZNF516Q92618 1163 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 FAM84AQ96KN4 292 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 TNIP3Q96KP6 325 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 FAM81BQ96LP2 452 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 NECTIN4Q96NY8 510 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 NT5C1BQ96P26 610 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 SEPT5Q99719 369 aaPredicted RBP8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 SYT15Q9BQS2 421 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 ACBD6Q9BR61 282 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 DNAJC25Q9H1X3 360 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 ZDHHC7Q9NXF8 308 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 AFF4Q9UHB7 1163 aaKnown RBP8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 FBXW11Q9UKB1 542 aa8.7□□□□□ -1.02
TM4SF1-204ENST00000493348 CDH9Q9ULB4 789 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms