RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 GDE1Q9NZC3 331 aa13.71□□□□□ -0.21
SEC61A1-206ENST00000491668 EXOC7Q9UPT5 735 aa13.71□□□□□ -0.21
SEC61A1-206ENST00000491668 SLC27A5Q9Y2P5 690 aa13.71□□□□□ -0.21
SEC61A1-206ENST00000491668 YIPF1Q9Y548 306 aa13.71□□□□□ -0.21
SEC61A1-206ENST00000491668 ZNF292O60281 2723 aa13.7□□□□□ -0.22
SEC61A1-206ENST00000491668 MTMR11A4FU01 709 aa13.7□□□□□ -0.22
SEC61A1-206ENST00000491668 CYB561D2O14569 222 aa13.7□□□□□ -0.22
SEC61A1-206ENST00000491668 ACTN4O43707 911 aaKnown RBP13.7□□□□□ -0.22
SEC61A1-206ENST00000491668 SOAT2O75908 522 aa13.7□□□□□ -0.22
SEC61A1-206ENST00000491668 IL18RAPO95256 599 aa13.7□□□□□ -0.22
SEC61A1-206ENST00000491668 MBD3O95983 291 aa13.7□□□□□ -0.22
SEC61A1-206ENST00000491668 ODC1P11926 461 aa13.7□□□□□ -0.22
SEC61A1-206ENST00000491668 GJA1P17302 382 aa13.7□□□□□ -0.22
SEC61A1-206ENST00000491668 MYBPC2Q14324 1141 aa13.7□□□□□ -0.22
SEC61A1-206ENST00000491668 FAM78AQ5JUQ0 283 aa13.7□□□□□ -0.22
SEC61A1-206ENST00000491668 WSCD1Q658N2 575 aa13.7□□□□□ -0.22
SEC61A1-206ENST00000491668 TANGO2Q6ICL3 276 aa13.7□□□□□ -0.22
SEC61A1-206ENST00000491668 MTSS1LQ765P7 747 aa13.7□□□□□ -0.22
SEC61A1-206ENST00000491668 LRRTM3Q86VH5 581 aa13.7□□□□□ -0.22
SEC61A1-206ENST00000491668 TMC8Q8IU68 726 aa13.7□□□□□ -0.22
SEC61A1-206ENST00000491668 CCDC65Q8IXS2 484 aa13.7□□□□□ -0.22
SEC61A1-206ENST00000491668 SYCP3Q8IZU3 236 aa13.7□□□□□ -0.22
SEC61A1-206ENST00000491668 C1orf127Q8N9H9 656 aa13.7□□□□□ -0.22
SEC61A1-206ENST00000491668 C7orf25Q9BPX7 421 aa13.7□□□□□ -0.22
SEC61A1-206ENST00000491668 OXCT2Q9BYC2 517 aaPredicted RBP13.7□□□□□ -0.22
SEC61A1-206ENST00000491668 ZCWPW1Q9H0M4 648 aa13.7□□□□□ -0.22
SEC61A1-206ENST00000491668 TBC1D17Q9HA65 648 aa13.7□□□□□ -0.22
SEC61A1-206ENST00000491668 PDE11AQ9HCR9 933 aa13.7□□□□□ -0.22
SEC61A1-206ENST00000491668 ARHGEF3Q9NR81 526 aa13.7□□□□□ -0.22
SEC61A1-206ENST00000491668 SIX4Q9UIU6 781 aa13.7□□□□□ -0.22
SEC61A1-206ENST00000491668 NCANO14594 1321 aa13.69□□□□□ -0.22
SEC61A1-206ENST00000491668 SHISA7A6NL88 538 aa13.69□□□□□ -0.22
SEC61A1-206ENST00000491668 TGFB1I1O43294 461 aa13.69□□□□□ -0.22
SEC61A1-206ENST00000491668 EXTL3O43909 919 aa13.69□□□□□ -0.22
SEC61A1-206ENST00000491668 ECI2O75521 394 aa13.69□□□□□ -0.22
SEC61A1-206ENST00000491668 MICAL2O94851 1124 aa13.69□□□□□ -0.22
SEC61A1-206ENST00000491668 PAX3P23760 479 aa13.69□□□□□ -0.22
SEC61A1-206ENST00000491668 TAF6P49848 677 aa13.69□□□□□ -0.22
SEC61A1-206ENST00000491668 ASIC1P78348 528 aa13.69□□□□□ -0.22
SEC61A1-206ENST00000491668 TFAMQ00059 246 aaKnown RBP13.69□□□□□ -0.22
SEC61A1-206ENST00000491668 SNW1Q13573 536 aaKnown RBP13.69□□□□□ -0.22
SEC61A1-206ENST00000491668 CBWD2Q8IUF1 395 aa13.69□□□□□ -0.22
SEC61A1-206ENST00000491668 GRAMD1CQ8IYS0 662 aa13.69□□□□□ -0.22
SEC61A1-206ENST00000491668 ENGASEQ8NFI3 743 aa13.69□□□□□ -0.22
SEC61A1-206ENST00000491668 SHKBP1Q8TBC3 707 aa13.69□□□□□ -0.22
SEC61A1-206ENST00000491668 ZNF507Q8TCN5 953 aa13.69□□□□□ -0.22
SEC61A1-206ENST00000491668 CCDC47Q96A33 483 aaKnown RBP13.69□□□□□ -0.22
SEC61A1-206ENST00000491668 PAGE5Q96GU1 130 aa13.69□□□□□ -0.22
SEC61A1-206ENST00000491668 TIGD1Q96MW7 591 aa13.69□□□□□ -0.22
SEC61A1-206ENST00000491668 BLZF1Q9H2G9 400 aa13.69□□□□□ -0.22
SEC61A1-206ENST00000491668 TMEM206Q9H813 350 aa13.69□□□□□ -0.22
SEC61A1-206ENST00000491668 RBAKQ9NYW8 714 aaPredicted RBP13.69□□□□□ -0.22
SEC61A1-206ENST00000491668 DLGAP2Q9P1A6 1054 aa13.69□□□□□ -0.22
SEC61A1-206ENST00000491668 RIF1Q5UIP0 2472 aaKnown RBP13.69□□□□□ -0.22
SEC61A1-206ENST00000491668 KPNA7A9QM74 516 aa13.68□□□□□ -0.22
SEC61A1-206ENST00000491668 ITGB3P05106 788 aa13.68□□□□□ -0.22
SEC61A1-206ENST00000491668 MYL4P12829 197 aa13.68□□□□□ -0.22
SEC61A1-206ENST00000491668 GLULP15104 373 aa13.68□□□□□ -0.22
SEC61A1-206ENST00000491668 POLR2BP30876 1174 aaKnown RBP13.68□□□□□ -0.22
SEC61A1-206ENST00000491668 STARD6P59095 220 aa13.68□□□□□ -0.22
SEC61A1-206ENST00000491668 CUL4BQ13620 913 aa13.68□□□□□ -0.22
SEC61A1-206ENST00000491668 PHLDB3Q6NSJ2 640 aa13.68□□□□□ -0.22
SEC61A1-206ENST00000491668 PDZD4Q76G19 769 aaPredicted RBP13.68□□□□□ -0.22
SEC61A1-206ENST00000491668 NT5DC4Q86YG4 428 aa13.68□□□□□ -0.22
SEC61A1-206ENST00000491668 CCDC105Q8IYK2 499 aa13.68□□□□□ -0.22
SEC61A1-206ENST00000491668 DTWD2Q8NBA8 298 aa13.68□□□□□ -0.22
SEC61A1-206ENST00000491668 OR5B17Q8NGF7 314 aa13.68□□□□□ -0.22
SEC61A1-206ENST00000491668 SCFD1Q8WVM8 642 aa13.68□□□□□ -0.22
SEC61A1-206ENST00000491668 RSPRY1Q96DX4 576 aa13.68□□□□□ -0.22
SEC61A1-206ENST00000491668 ZNF512Q96ME7 567 aaPredicted RBP13.68□□□□□ -0.22
SEC61A1-206ENST00000491668 DDX23Q9BUQ8 820 aaKnown RBP13.68□□□□□ -0.22
SEC61A1-206ENST00000491668 FOXQ1Q9C009 403 aa13.68□□□□□ -0.22
SEC61A1-206ENST00000491668 GZF1Q9H116 711 aaPredicted RBP13.68□□□□□ -0.22
SEC61A1-206ENST00000491668 ZNF334Q9HCZ1 680 aaPredicted RBP13.68□□□□□ -0.22
SEC61A1-206ENST00000491668 ZNF197O14709 1029 aa13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 EIF3DO15371 548 aaKnown RBP eCLIP13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 LRRN2O75325 713 aa13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 LDHAP00338 332 aaKnown RBP13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 MYL1P05976 194 aa13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 ATF6P18850 670 aa13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 TEAD2Q15562 447 aa13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 SLC39A12Q504Y0 691 aa13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 FAM26FQ5R3K3 315 aa13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 STXBP5Q5T5C0 1151 aa13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 CYP4A22Q5TCH4 519 aa13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 LMBRD2Q68DH5 695 aaPredicted RBP13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 ARMCX5Q6P1M9 558 aa13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 UNC13DQ70J99 1090 aa13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 GAREM2Q75VX8 874 aa13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 GPD1LQ8N335 351 aa13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 PDCL2Q8N4E4 241 aa13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 ATOH1Q92858 354 aaPredicted RBP13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 ELSPBP1Q96BH3 223 aa13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 ASB16Q96NS5 453 aa13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 MKNK1Q9BUB5 465 aa13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 MTMR12Q9C0I1 747 aa13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 AGPAT3Q9NRZ7 376 aa13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 TMLHEQ9NVH6 421 aa13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 HSPBP1Q9NZL4 362 aa13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 DSEQ9UL01 958 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms