RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 FGF19O95750 216 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 ITGB3P05106 788 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 POLR2BP30876 1174 aaKnown RBP8.91□□□□□ -0.98
LSM2-213ENST00000491421 ME1P48163 572 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 CDR1P51861 262 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 UBXN2BQ14CS0 331 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 VEPH1Q14D04 833 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 TEAD2Q15562 447 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 MGAT5BQ3V5L5 792 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 TPRG1Q6ZUI0 275 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 ITIH5Q86UX2 942 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 TMC8Q8IU68 726 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 GPD1LQ8N335 351 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 CSGALNACT2Q8N6G5 542 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 TTC9BQ8N6N2 239 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 C1orf127Q8N9H9 656 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 GLIS3Q8NEA6 775 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 SHKBP1Q8TBC3 707 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 ZSCAN18Q8TBC5 510 aaPredicted RBP8.91□□□□□ -0.98
LSM2-213ENST00000491421 HPS3Q969F9 1004 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 PSMG2Q969U7 264 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 ZSWIM3Q96MP5 696 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 SEPT5Q99719 369 aaPredicted RBP8.91□□□□□ -0.98
LSM2-213ENST00000491421 DDX23Q9BUQ8 820 aaKnown RBP8.91□□□□□ -0.98
LSM2-213ENST00000491421 TRMT61BQ9BVS5 477 aaKnown RBP8.91□□□□□ -0.98
LSM2-213ENST00000491421 GPR88Q9GZN0 384 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 ZCWPW1Q9H0M4 648 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 DNAJC25Q9H1X3 360 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 BRD9Q9H8M2 597 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 MAGEF1Q9HAY2 307 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 PDE11AQ9HCR9 933 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 DLGAP2Q9P1A6 1054 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 HSFX1Q9UBD0 423 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 ITGA11Q9UKX5 1188 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 AGAP1Q9UPQ3 857 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 ASB3Q9Y575 518 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 DOCK8Q8NF50 2099 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 CITO14578 2027 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 MYH11P35749 1972 aa8.91□□□□□ -0.98
LSM2-213ENST00000491421 TRIP11Q15643 1979 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 FAM170BA6NMN3 283 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 KIAA0391O15091 583 aaKnown RBP8.9□□□□□ -0.98
LSM2-213ENST00000491421 EIF3DO15371 548 aaKnown RBP eCLIP8.9□□□□□ -0.98
LSM2-213ENST00000491421 POLR2DO15514 142 aaKnown RBP8.9□□□□□ -0.98
LSM2-213ENST00000491421 HUS1O60921 280 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 LRRN2O75325 713 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 KRT19P08727 400 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 TMEM191BP0C7N4 346 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 PSMC3P17980 439 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 CD72P21854 359 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 VIPR2P41587 438 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 TUFMP49411 452 aaKnown RBP8.9□□□□□ -0.98
LSM2-213ENST00000491421 TSPY1Q01534 308 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 SMARCB1Q12824 385 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 BFSP1Q12934 665 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 PKP1Q13835 747 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 FAM26FQ5R3K3 315 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 ATL3Q6DD88 541 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 CNNM4Q6P4Q7 775 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 VITQ6UXI7 678 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 DNAJB7Q7Z6W7 309 aaPredicted RBP8.9□□□□□ -0.98
LSM2-213ENST00000491421 C1orf210Q8IVY1 113 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 DCP1BQ8IZD4 617 aaKnown RBP8.9□□□□□ -0.98
LSM2-213ENST00000491421 LRRC52Q8N7C0 313 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 FAM200AQ8TCP9 573 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 C2orf15Q8WU43 125 aaKnown RBP8.9□□□□□ -0.98
LSM2-213ENST00000491421 DEPDC1BQ8WUY9 529 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 DNASE1L2Q92874 299 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 NKD2Q969F2 451 aaPredicted RBP8.9□□□□□ -0.98
LSM2-213ENST00000491421 BORCS6Q96GS4 357 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 FAM84AQ96KN4 292 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 LPIN3Q9BQK8 851 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 LRRC3Q9BY71 257 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 BCO2Q9BYV7 579 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 OSBPL6Q9BZF3 934 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 MTMR12Q9C0I1 747 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 TRPV4Q9HBA0 871 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 ZNF334Q9HCZ1 680 aaPredicted RBP8.9□□□□□ -0.98
LSM2-213ENST00000491421 LTB4R2Q9NPC1 389 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 HEBP1Q9NRV9 189 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 ABI2Q9NYB9 513 aaPredicted RBP8.9□□□□□ -0.98
LSM2-213ENST00000491421 FAM13BQ9NYF5 915 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 CFAP45Q9UL16 551 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 PCDHA7Q9UN72 937 aa8.9□□□□□ -0.98
LSM2-213ENST00000491421 R3HCC1Q9Y3T6 440 aaKnown RBP8.9□□□□□ -0.98
LSM2-213ENST00000491421 MTF2Q9Y483 593 aaPredicted RBP8.9□□□□□ -0.98
LSM2-213ENST00000491421 VPS13AQ96RL7 3174 aa8.89□□□□□ -0.99
LSM2-213ENST00000491421 PDCD11Q14690 1871 aaKnown RBP8.89□□□□□ -0.99
LSM2-213ENST00000491421 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.89□□□□□ -0.99
LSM2-213ENST00000491421 PRR23AA6NEV1 266 aa8.89□□□□□ -0.99
LSM2-213ENST00000491421 ZNF233A6NK53 670 aa8.89□□□□□ -0.99
LSM2-213ENST00000491421 TNNC2P02585 160 aa8.89□□□□□ -0.99
LSM2-213ENST00000491421 GLULP15104 373 aa8.89□□□□□ -0.99
LSM2-213ENST00000491421 ATF6P18850 670 aa8.89□□□□□ -0.99
LSM2-213ENST00000491421 GABRR2P28476 465 aa8.89□□□□□ -0.99
LSM2-213ENST00000491421 GDI1P31150 447 aa8.89□□□□□ -0.99
LSM2-213ENST00000491421 HOXD13P35453 343 aa8.89□□□□□ -0.99
LSM2-213ENST00000491421 RBP5P82980 135 aa8.89□□□□□ -0.99
LSM2-213ENST00000491421 DNM1Q05193 864 aaKnown RBP8.89□□□□□ -0.99
LSM2-213ENST00000491421 SURF1Q15526 300 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms