RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 ALDH1A3P47895 512 aa19.42■□□□□ 0.7
HMGN1-219ENST00000491183 ME1P48163 572 aa19.42■□□□□ 0.7
HMGN1-219ENST00000491183 EHHADHQ08426 723 aa19.42■□□□□ 0.7
HMGN1-219ENST00000491183 PLD1Q13393 1074 aa19.42■□□□□ 0.7
HMGN1-219ENST00000491183 SV2CQ496J9 727 aa19.42■□□□□ 0.7
HMGN1-219ENST00000491183 RESP18Q5W5W9 173 aa19.42■□□□□ 0.7
HMGN1-219ENST00000491183 METTL23Q86XA0 190 aa19.42■□□□□ 0.7
HMGN1-219ENST00000491183 SHKBP1Q8TBC3 707 aa19.42■□□□□ 0.7
HMGN1-219ENST00000491183 NOC3LQ8WTT2 800 aaKnown RBP19.42■□□□□ 0.7
HMGN1-219ENST00000491183 CACTINQ8WUQ7 758 aaKnown RBP19.42■□□□□ 0.7
HMGN1-219ENST00000491183 ASB16Q96NS5 453 aa19.42■□□□□ 0.7
HMGN1-219ENST00000491183 DDX23Q9BUQ8 820 aaKnown RBP19.42■□□□□ 0.7
HMGN1-219ENST00000491183 FOXQ1Q9C009 403 aa19.42■□□□□ 0.7
HMGN1-219ENST00000491183 ASAH2Q9NR71 780 aa19.42■□□□□ 0.7
HMGN1-219ENST00000491183 SIT1Q9Y3P8 196 aa19.42■□□□□ 0.7
HMGN1-219ENST00000491183 TGFB1I1O43294 461 aa19.41■□□□□ 0.7
HMGN1-219ENST00000491183 LRRN2O75325 713 aa19.41■□□□□ 0.7
HMGN1-219ENST00000491183 RFX1P22670 979 aa19.41■□□□□ 0.7
HMGN1-219ENST00000491183 EPHB3P54753 998 aa19.41■□□□□ 0.7
HMGN1-219ENST00000491183 PFKPQ01813 784 aa19.41■□□□□ 0.7
HMGN1-219ENST00000491183 TEAD2Q15562 447 aa19.41■□□□□ 0.7
HMGN1-219ENST00000491183 MLF2Q15773 248 aaPredicted RBP19.41■□□□□ 0.7
HMGN1-219ENST00000491183 SLC39A12Q504Y0 691 aa19.41■□□□□ 0.7
HMGN1-219ENST00000491183 FAM26FQ5R3K3 315 aa19.41■□□□□ 0.7
HMGN1-219ENST00000491183 STXBP4Q6ZWJ1 553 aa19.41■□□□□ 0.7
HMGN1-219ENST00000491183 DNAJB7Q7Z6W7 309 aaPredicted RBP19.41■□□□□ 0.7
HMGN1-219ENST00000491183 THEM5Q8N1Q8 247 aa19.41■□□□□ 0.7
HMGN1-219ENST00000491183 SHDQ96IW2 340 aa19.41■□□□□ 0.7
HMGN1-219ENST00000491183 BLZF1Q9H2G9 400 aa19.41■□□□□ 0.7
HMGN1-219ENST00000491183 ZFP14Q9HCL3 533 aa19.41■□□□□ 0.7
HMGN1-219ENST00000491183 ZNF334Q9HCZ1 680 aaPredicted RBP19.41■□□□□ 0.7
HMGN1-219ENST00000491183 HSFX1Q9UBD0 423 aa19.41■□□□□ 0.7
HMGN1-219ENST00000491183 SIX4Q9UIU6 781 aa19.41■□□□□ 0.7
HMGN1-219ENST00000491183 CFAP45Q9UL16 551 aa19.41■□□□□ 0.7
HMGN1-219ENST00000491183 PROB1E7EW31 1015 aa19.4■□□□□ 0.7
HMGN1-219ENST00000491183 KIAA0391O15091 583 aaKnown RBP19.4■□□□□ 0.7
HMGN1-219ENST00000491183 EIF3DO15371 548 aaKnown RBP eCLIP19.4■□□□□ 0.7
HMGN1-219ENST00000491183 GLULP15104 373 aa19.4■□□□□ 0.7
HMGN1-219ENST00000491183 PNPLA4P41247 253 aa19.4■□□□□ 0.7
HMGN1-219ENST00000491183 PRKCQQ04759 706 aa19.4■□□□□ 0.7
HMGN1-219ENST00000491183 ANGPT1Q15389 498 aa19.4■□□□□ 0.7
HMGN1-219ENST00000491183 UNC13DQ70J99 1090 aa19.4■□□□□ 0.7
HMGN1-219ENST00000491183 CBWD2Q8IUF1 395 aa19.4■□□□□ 0.7
HMGN1-219ENST00000491183 CSGALNACT2Q8N6G5 542 aa19.4■□□□□ 0.7
HMGN1-219ENST00000491183 PJA1Q8NG27 643 aa19.4■□□□□ 0.7
HMGN1-219ENST00000491183 SMARCD2Q92925 531 aa19.4■□□□□ 0.7
HMGN1-219ENST00000491183 ZNF560Q96MR9 790 aa19.4■□□□□ 0.7
HMGN1-219ENST00000491183 MAGEF1Q9HAY2 307 aa19.4■□□□□ 0.7
HMGN1-219ENST00000491183 FAM13BQ9NYF5 915 aa19.4■□□□□ 0.7
HMGN1-219ENST00000491183 ZDHHC9Q9Y397 364 aa19.4■□□□□ 0.7
HMGN1-219ENST00000491183 MTF2Q9Y483 593 aaPredicted RBP19.4■□□□□ 0.7
HMGN1-219ENST00000491183 ASB3Q9Y575 518 aa19.4■□□□□ 0.7
HMGN1-219ENST00000491183 PTPRJQ12913 1337 aa19.4■□□□□ 0.7
HMGN1-219ENST00000491183 A0A1W2PRU2 124 aa19.39■□□□□ 0.69
HMGN1-219ENST00000491183 KANSL1LA0AUZ9 987 aa19.39■□□□□ 0.69
HMGN1-219ENST00000491183 ZNF233A6NK53 670 aa19.39■□□□□ 0.69
HMGN1-219ENST00000491183 CD72P21854 359 aa19.39■□□□□ 0.69
HMGN1-219ENST00000491183 NBL1P41271 181 aa19.39■□□□□ 0.69
HMGN1-219ENST00000491183 VIPR2P41587 438 aa19.39■□□□□ 0.69
HMGN1-219ENST00000491183 CUL4BQ13620 913 aa19.39■□□□□ 0.69
HMGN1-219ENST00000491183 GRM2Q14416 872 aa19.39■□□□□ 0.69
HMGN1-219ENST00000491183 LMBRD2Q68DH5 695 aaPredicted RBP19.39■□□□□ 0.69
HMGN1-219ENST00000491183 VITQ6UXI7 678 aa19.39■□□□□ 0.69
HMGN1-219ENST00000491183 GAREM2Q75VX8 874 aa19.39■□□□□ 0.69
HMGN1-219ENST00000491183 PDCL2Q8N4E4 241 aa19.39■□□□□ 0.69
HMGN1-219ENST00000491183 LRRC52Q8N7C0 313 aa19.39■□□□□ 0.69
HMGN1-219ENST00000491183 OR5B17Q8NGF7 314 aa19.39■□□□□ 0.69
HMGN1-219ENST00000491183 ZSCAN18Q8TBC5 510 aaPredicted RBP19.39■□□□□ 0.69
HMGN1-219ENST00000491183 SCFD1Q8WVM8 642 aa19.39■□□□□ 0.69
HMGN1-219ENST00000491183 PSMG2Q969U7 264 aa19.39■□□□□ 0.69
HMGN1-219ENST00000491183 CHAMP1Q96JM3 812 aa19.39■□□□□ 0.69
HMGN1-219ENST00000491183 LPIN3Q9BQK8 851 aa19.39■□□□□ 0.69
HMGN1-219ENST00000491183 MTMR12Q9C0I1 747 aa19.39■□□□□ 0.69
HMGN1-219ENST00000491183 TRPV4Q9HBA0 871 aa19.39■□□□□ 0.69
HMGN1-219ENST00000491183 TMLHEQ9NVH6 421 aa19.39■□□□□ 0.69
HMGN1-219ENST00000491183 INTS13Q9NVM9 706 aa19.39■□□□□ 0.69
HMGN1-219ENST00000491183 HSPBP1Q9NZL4 362 aa19.39■□□□□ 0.69
HMGN1-219ENST00000491183 ITGA11Q9UKX5 1188 aa19.39■□□□□ 0.69
HMGN1-219ENST00000491183 L1RE1Q9UN81 338 aa19.39■□□□□ 0.69
HMGN1-219ENST00000491183 NCANO14594 1321 aa19.39■□□□□ 0.69
HMGN1-219ENST00000491183 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.38■□□□□ 0.69
HMGN1-219ENST00000491183 SHISA7A6NL88 538 aa19.38■□□□□ 0.69
HMGN1-219ENST00000491183 ATF6P18850 670 aa19.38■□□□□ 0.69
HMGN1-219ENST00000491183 AFMP43652 599 aa19.38■□□□□ 0.69
HMGN1-219ENST00000491183 TUFMP49411 452 aaKnown RBP19.38■□□□□ 0.69
HMGN1-219ENST00000491183 RBP5P82980 135 aa19.38■□□□□ 0.69
HMGN1-219ENST00000491183 BFSP1Q12934 665 aa19.38■□□□□ 0.69
HMGN1-219ENST00000491183 MGAT5BQ3V5L5 792 aa19.38■□□□□ 0.69
HMGN1-219ENST00000491183 STXBP5Q5T5C0 1151 aa19.38■□□□□ 0.69
HMGN1-219ENST00000491183 NELFCDQ8IXH7 590 aa19.38■□□□□ 0.69
HMGN1-219ENST00000491183 GRAMD1CQ8IYS0 662 aa19.38■□□□□ 0.69
HMGN1-219ENST00000491183 SEPT5Q99719 369 aaPredicted RBP19.38■□□□□ 0.69
HMGN1-219ENST00000491183 MKNK1Q9BUB5 465 aa19.38■□□□□ 0.69
HMGN1-219ENST00000491183 TRMT61BQ9BVS5 477 aaKnown RBP19.38■□□□□ 0.69
HMGN1-219ENST00000491183 GPR88Q9GZN0 384 aa19.38■□□□□ 0.69
HMGN1-219ENST00000491183 AGPAT3Q9NRZ7 376 aa19.38■□□□□ 0.69
HMGN1-219ENST00000491183 GDAP2Q9NXN4 497 aa19.38■□□□□ 0.69
HMGN1-219ENST00000491183 SERTAD1Q9UHV2 236 aa19.38■□□□□ 0.69
HMGN1-219ENST00000491183 MIA3Q5JRA6 1907 aa19.37■□□□□ 0.69
HMGN1-219ENST00000491183 PVALEFA0A1B0GWK0 134 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms