RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 KCTD10Q9H3F6 313 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 SERHL2Q9H4I8 314 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 IFT22Q9H7X7 185 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 EMC7Q9NPA0 242 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 DDX19AQ9NUU7 478 aaKnown RBP2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 GPRC5DQ9NZD1 345 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 HMG20BQ9P0W2 317 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 TRPS1Q9UHF7 1281 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 EVLQ9UI08 416 aaPredicted RBP2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 PRDM4Q9UKN5 801 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 EXOC6BQ9Y2D4 811 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 LRRFIP2Q9Y608 721 aaKnown RBP2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 MORC2Q9Y6X9 1032 aaPredicted RBP2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 NEXMIFQ5QGS0 1516 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 DLC1Q96QB1 1528 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 SPATA31A6Q5VVP1 1343 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 CCDC171Q6TFL3 1326 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 USP42Q9H9J4 1324 aaKnown RBP2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 GLI2P10070 1586 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 CDC42BPGQ6DT37 1551 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 ARHGEF10O15013 1369 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 CAMSAP1Q5T5Y3 1602 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 MROH1Q8NDA8 1641 aa2.35□□□□□ -2.03
SNRNP40-207ENST00000491106 MROH2AA6NES4 1674 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 CRB1P82279 1406 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 RIMS2Q9UQ26 1411 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 TULP4Q9NRJ4 1543 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 PI4KAP2A4QPH2 592 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 SMTNL1A8MU46 457 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 ZNF185O15231 689 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 ATP8B1O43520 1251 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 ULK1O75385 1050 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 DDX58O95786 925 aaKnown RBP2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 FOSP01100 380 aaPredicted RBP2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 POMCP01189 267 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 GASTP01350 101 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 PFKMP08237 780 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 TPM1P09493 284 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 HKR1P10072 659 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 TNNT1P13805 278 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 ATP5JP18859 108 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 EIF2S2P20042 333 aaKnown RBP2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 CTSSP25774 331 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 GJB2P29033 226 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 ECHS1P30084 290 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 KCNJ4P48050 445 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 CHN2P52757 468 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 PTTG1IPP53801 180 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 CLRN1P58418 232 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 EIF4A1P60842 406 aaKnown RBP2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 ADAM8P78325 824 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 FAM189BP81408 668 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 TAP1Q03518 808 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 DMTNQ08495 405 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 PTPN14Q15678 1187 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 ME3Q16798 604 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 KRT24Q2M2I5 525 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 PDCD4Q53EL6 469 aaKnown RBP2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 CCDC178Q5BJE1 867 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 DALRD3Q5D0E6 543 aaKnown RBP2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 MUM1L1Q5H9M0 696 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 GPR158Q5T848 1215 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 ADALQ6DHV7 355 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 GIMAP6Q6P9H5 292 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 BLOC1S2Q6QNY1 142 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 OLFML1Q6UWY5 402 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 LRRC55Q6ZSA7 311 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 RBM43Q6ZSC3 357 aaKnown RBP2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 CCDC186Q7Z3E2 898 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 ARHGEF25Q86VW2 580 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 LRRC8AQ8IWT6 810 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 AMOTL1Q8IY63 956 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 FBXL16Q8N461 479 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 PI4KAP1Q8N8J0 262 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 KCNH5Q8NCM2 988 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 REPS2Q8NFH8 660 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 LINS1Q8NG48 757 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 OR52N2Q8NGI0 321 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 ATL2Q8NHH9 583 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 CCHCR1Q8TD31 782 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 ZNF480Q8WV37 535 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 ANKRD7Q92527 254 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 FATE1Q969F0 183 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 PTCD3Q96EY7 689 aaKnown RBP2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 MYEOVQ96EZ4 313 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 ZNF274Q96GC6 653 aaPredicted RBP2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 RAX2Q96IS3 184 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 ZNF396Q96N95 335 aaPredicted RBP2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 ZNF830Q96NB3 372 aaPredicted RBP2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 NEK1Q96PY6 1258 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 PDCD2LQ9BRP1 358 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 SPATA5L1Q9BVQ7 753 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 ACE2Q9BYF1 805 aaPredicted RBP2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 ALOXE3Q9BYJ1 711 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 TRIM5Q9C035 493 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 NUP62CLQ9H1M0 184 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 TNMDQ9H2S6 317 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 LDAHQ9H6V9 325 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms