RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 SHKBP1Q8TBC3 707 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 PRPF31Q8WWY3 499 aaKnown RBP7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 TMEM209Q96SK2 561 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 CSRNP2Q9H175 543 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 TCEAL9Q9UHQ7 104 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 BACE2Q9Y5Z0 518 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 NUP210Q8TEM1 1887 aaPredicted RBP7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 MYO16Q9Y6X6 1858 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 CREBBPQ92793 2442 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 ITPR2Q14571 2701 aa7.91□□□□□ -1.14
PDLIM1-203ENST00000490391 ITPR3Q14573 2671 aa7.9□□□□□ -1.14
PDLIM1-203ENST00000490391 AHCTF1Q8WYP5 2266 aa7.9□□□□□ -1.14
PDLIM1-203ENST00000490391 EDIL3O43854 480 aa7.9□□□□□ -1.14
PDLIM1-203ENST00000490391 ATG13O75143 517 aa7.9□□□□□ -1.14
PDLIM1-203ENST00000490391 SEC24AO95486 1093 aa7.9□□□□□ -1.14
PDLIM1-203ENST00000490391 ENGP17813 658 aa7.9□□□□□ -1.14
PDLIM1-203ENST00000490391 GBP1P32455 592 aa7.9□□□□□ -1.14
PDLIM1-203ENST00000490391 CIITAP33076 1130 aa7.9□□□□□ -1.14
PDLIM1-203ENST00000490391 RDXP35241 583 aaKnown RBP7.9□□□□□ -1.14
PDLIM1-203ENST00000490391 ADCY7P51828 1080 aa7.9□□□□□ -1.14
PDLIM1-203ENST00000490391 TNK2Q07912 1038 aa7.9□□□□□ -1.14
PDLIM1-203ENST00000490391 LAMTOR4Q0VGL1 99 aa7.9□□□□□ -1.14
PDLIM1-203ENST00000490391 ELAVL2Q12926 359 aaKnown RBP7.9□□□□□ -1.14
PDLIM1-203ENST00000490391 TEAD2Q15562 447 aa7.9□□□□□ -1.14
PDLIM1-203ENST00000490391 CYP4A22Q5TCH4 519 aa7.9□□□□□ -1.14
PDLIM1-203ENST00000490391 SLC8B1Q6J4K2 584 aa7.9□□□□□ -1.14
PDLIM1-203ENST00000490391 B3GNT9Q6UX72 402 aa7.9□□□□□ -1.14
PDLIM1-203ENST00000490391 CD300LGQ6UXG3 332 aa7.9□□□□□ -1.14
PDLIM1-203ENST00000490391 YAF2Q8IY57 180 aa7.9□□□□□ -1.14
PDLIM1-203ENST00000490391 FAM200AQ8TCP9 573 aa7.9□□□□□ -1.14
PDLIM1-203ENST00000490391 RILPL2Q969X0 211 aa7.9□□□□□ -1.14
PDLIM1-203ENST00000490391 CPB2Q96IY4 423 aa7.9□□□□□ -1.14
PDLIM1-203ENST00000490391 CXCL16Q9H2A7 254 aa7.9□□□□□ -1.14
PDLIM1-203ENST00000490391 UNC45AQ9H3U1 944 aa7.9□□□□□ -1.14
PDLIM1-203ENST00000490391 TMEM74BQ9NUR3 256 aa7.9□□□□□ -1.14
PDLIM1-203ENST00000490391 KLK14Q9P0G3 267 aa7.9□□□□□ -1.14
PDLIM1-203ENST00000490391 CEP72Q9P209 647 aa7.9□□□□□ -1.14
PDLIM1-203ENST00000490391 MBD1Q9UIS9 605 aaPredicted RBP7.9□□□□□ -1.14
PDLIM1-203ENST00000490391 INSL5Q9Y5Q6 135 aa7.9□□□□□ -1.14
PDLIM1-203ENST00000490391 CABIN1Q9Y6J0 2220 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 SMCO2A6NFE2 343 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 E7EWF7 191 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 TRDMT1O14717 391 aaKnown RBP7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 MSH4O15457 936 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 CHMP2AO43633 222 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 APBB3O95704 486 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 EGFP01133 1207 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 FTH1P19P0C7X4 201 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 SRGAP2CP0DJJ0 459 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 CD59P13987 128 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 ATF2P15336 505 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 MX2P20592 715 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 TKTP29401 623 aaKnown RBP7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 AXLP30530 894 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 SFNP31947 248 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 JAK3P52333 1124 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 PCBP1Q15365 356 aaKnown RBP eCLIP7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 ARHGAP29Q52LW3 1261 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 PRR16Q569H4 304 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 STXBP5Q5T5C0 1151 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 JAKMIP3Q5VZ66 844 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 PLA2G4FQ68DD2 849 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 SLC23A3Q6PIS1 610 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 PCSK4Q6UW60 755 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 SYT13Q7L8C5 426 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 RALYLQ86SE5 291 aaKnown RBP7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 C11orf74Q86VG3 221 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 RAB11FIP4Q86YS3 637 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 PNPLA1Q8N8W4 532 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 NCOA7Q8NI08 942 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 PIGKQ92643 395 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 EZH1Q92800 747 aaPredicted RBP7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 GJA10Q969M2 543 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 TMEM143Q96AN5 459 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 JPH2Q9BR39 696 aaPredicted RBP7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 LRRC3Q9BY71 257 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 CLMPQ9H6B4 373 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 DHX33Q9H6R0 707 aaKnown RBP7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 FBRSL1Q9HCM7 1045 aaKnown RBP7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 DIAPH3Q9NSV4 1193 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 INVSQ9Y283 1065 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 ARID2Q68CP9 1835 aa7.89□□□□□ -1.15
PDLIM1-203ENST00000490391 PLXND1Q9Y4D7 1925 aa7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 OTOL1A6NHN0 477 aaPredicted RBP7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 TMEM189-UBE2V1I3L0A0 370 aa7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 CCER2I3L3R5 266 aa7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 PRRG1O14668 218 aa7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 ERLIN2O94905 339 aa7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 PRKCBP05771 671 aa7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 MYL4P12829 197 aa7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 ARF4P18085 180 aaPredicted RBP7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 DHPSP49366 369 aaPredicted RBP7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 NPEPPSP55786 919 aa7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 PTENP60484 403 aa7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 ITPRIPL2Q3MIP1 535 aa7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 ANKRD45Q5TZF3 282 aa7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 PEAR1Q5VY43 1037 aaPredicted RBP7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 CDR2LQ86X02 465 aaPredicted RBP7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 TMC8Q8IU68 726 aa7.88□□□□□ -1.15
PDLIM1-203ENST00000490391 ARID3BQ8IVW6 561 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms