RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 SMARCB1Q12824 385 aa13.54□□□□□ -0.24
SRRM1-216ENST00000489130 SLC39A12Q504Y0 691 aa13.54□□□□□ -0.24
SRRM1-216ENST00000489130 FAM78AQ5JUQ0 283 aa13.54□□□□□ -0.24
SRRM1-216ENST00000489130 FAM26FQ5R3K3 315 aa13.54□□□□□ -0.24
SRRM1-216ENST00000489130 WSCD1Q658N2 575 aa13.54□□□□□ -0.24
SRRM1-216ENST00000489130 UNC13DQ70J99 1090 aa13.54□□□□□ -0.24
SRRM1-216ENST00000489130 THEM5Q8N1Q8 247 aa13.54□□□□□ -0.24
SRRM1-216ENST00000489130 TTC9BQ8N6N2 239 aa13.54□□□□□ -0.24
SRRM1-216ENST00000489130 LRRC52Q8N7C0 313 aa13.54□□□□□ -0.24
SRRM1-216ENST00000489130 SPRYD3Q8NCJ5 442 aa13.54□□□□□ -0.24
SRRM1-216ENST00000489130 PJA1Q8NG27 643 aa13.54□□□□□ -0.24
SRRM1-216ENST00000489130 ZNF507Q8TCN5 953 aa13.54□□□□□ -0.24
SRRM1-216ENST00000489130 CACTINQ8WUQ7 758 aaKnown RBP13.54□□□□□ -0.24
SRRM1-216ENST00000489130 PSMG2Q969U7 264 aa13.54□□□□□ -0.24
SRRM1-216ENST00000489130 ZSWIM3Q96MP5 696 aa13.54□□□□□ -0.24
SRRM1-216ENST00000489130 PLA2G2FQ9BZM2 168 aa13.54□□□□□ -0.24
SRRM1-216ENST00000489130 FAM13BQ9NYF5 915 aa13.54□□□□□ -0.24
SRRM1-216ENST00000489130 DLGAP2Q9P1A6 1054 aa13.54□□□□□ -0.24
SRRM1-216ENST00000489130 RCOR1Q9UKL0 485 aa13.54□□□□□ -0.24
SRRM1-216ENST00000489130 ITGA11Q9UKX5 1188 aa13.54□□□□□ -0.24
SRRM1-216ENST00000489130 SLC27A5Q9Y2P5 690 aa13.54□□□□□ -0.24
SRRM1-216ENST00000489130 ASB3Q9Y575 518 aa13.54□□□□□ -0.24
SRRM1-216ENST00000489130 UBE4BO95155 1302 aa13.54□□□□□ -0.24
SRRM1-216ENST00000489130 SCN1AP35498 2009 aa13.54□□□□□ -0.24
SRRM1-216ENST00000489130 STK25O00506 426 aa13.53□□□□□ -0.24
SRRM1-216ENST00000489130 MYL4P12829 197 aa13.53□□□□□ -0.24
SRRM1-216ENST00000489130 GJA1P17302 382 aa13.53□□□□□ -0.24
SRRM1-216ENST00000489130 SNW1Q13573 536 aaKnown RBP13.53□□□□□ -0.24
SRRM1-216ENST00000489130 TEAD2Q15562 447 aa13.53□□□□□ -0.24
SRRM1-216ENST00000489130 MLF2Q15773 248 aaPredicted RBP13.53□□□□□ -0.24
SRRM1-216ENST00000489130 SLC44A4Q53GD3 710 aa13.53□□□□□ -0.24
SRRM1-216ENST00000489130 SHKBP1Q8TBC3 707 aa13.53□□□□□ -0.24
SRRM1-216ENST00000489130 C2orf15Q8WU43 125 aaKnown RBP13.53□□□□□ -0.24
SRRM1-216ENST00000489130 SMARCD2Q92925 531 aa13.53□□□□□ -0.24
SRRM1-216ENST00000489130 FOXQ1Q9C009 403 aa13.53□□□□□ -0.24
SRRM1-216ENST00000489130 MTMR12Q9C0I1 747 aa13.53□□□□□ -0.24
SRRM1-216ENST00000489130 GPR88Q9GZN0 384 aa13.53□□□□□ -0.24
SRRM1-216ENST00000489130 TRPV4Q9HBA0 871 aa13.53□□□□□ -0.24
SRRM1-216ENST00000489130 ZFP14Q9HCL3 533 aa13.53□□□□□ -0.24
SRRM1-216ENST00000489130 PDE11AQ9HCR9 933 aa13.53□□□□□ -0.24
SRRM1-216ENST00000489130 HSPBP1Q9NZL4 362 aa13.53□□□□□ -0.24
SRRM1-216ENST00000489130 SIX4Q9UIU6 781 aa13.53□□□□□ -0.24
SRRM1-216ENST00000489130 AGAP1Q9UPQ3 857 aa13.53□□□□□ -0.24
SRRM1-216ENST00000489130 SIT1Q9Y3P8 196 aa13.53□□□□□ -0.24
SRRM1-216ENST00000489130 CACNA1HO95180 2353 aa13.53□□□□□ -0.24
SRRM1-216ENST00000489130 PVALEFA0A1B0GWK0 134 aa13.52□□□□□ -0.25
SRRM1-216ENST00000489130 KANSL1LA0AUZ9 987 aa13.52□□□□□ -0.25
SRRM1-216ENST00000489130 ZNF233A6NK53 670 aa13.52□□□□□ -0.25
SRRM1-216ENST00000489130 PROB1E7EW31 1015 aa13.52□□□□□ -0.25
SRRM1-216ENST00000489130 TGFB1I1O43294 461 aa13.52□□□□□ -0.25
SRRM1-216ENST00000489130 SOAT2O75908 522 aa13.52□□□□□ -0.25
SRRM1-216ENST00000489130 CASP1P29466 404 aa13.52□□□□□ -0.25
SRRM1-216ENST00000489130 NBL1P41271 181 aa13.52□□□□□ -0.25
SRRM1-216ENST00000489130 TUFMP49411 452 aaKnown RBP13.52□□□□□ -0.25
SRRM1-216ENST00000489130 ANGPT1Q15389 498 aa13.52□□□□□ -0.25
SRRM1-216ENST00000489130 SURF1Q15526 300 aa13.52□□□□□ -0.25
SRRM1-216ENST00000489130 SCARA3Q6AZY7 606 aa13.52□□□□□ -0.25
SRRM1-216ENST00000489130 DNAJB7Q7Z6W7 309 aaPredicted RBP13.52□□□□□ -0.25
SRRM1-216ENST00000489130 ITIH5Q86UX2 942 aa13.52□□□□□ -0.25
SRRM1-216ENST00000489130 LRRTM3Q86VH5 581 aa13.52□□□□□ -0.25
SRRM1-216ENST00000489130 CBWD2Q8IUF1 395 aa13.52□□□□□ -0.25
SRRM1-216ENST00000489130 PDCL2Q8N4E4 241 aa13.52□□□□□ -0.25
SRRM1-216ENST00000489130 CSGALNACT2Q8N6G5 542 aa13.52□□□□□ -0.25
SRRM1-216ENST00000489130 ZSCAN18Q8TBC5 510 aaPredicted RBP13.52□□□□□ -0.25
SRRM1-216ENST00000489130 SPATA18Q8TC71 538 aa13.52□□□□□ -0.25
SRRM1-216ENST00000489130 SPPL2BQ8TCT7 592 aa13.52□□□□□ -0.25
SRRM1-216ENST00000489130 NOC3LQ8WTT2 800 aaKnown RBP13.52□□□□□ -0.25
SRRM1-216ENST00000489130 SCFD1Q8WVM8 642 aa13.52□□□□□ -0.25
SRRM1-216ENST00000489130 DNASE1L2Q92874 299 aa13.52□□□□□ -0.25
SRRM1-216ENST00000489130 FAM84AQ96KN4 292 aa13.52□□□□□ -0.25
SRRM1-216ENST00000489130 SEPT5Q99719 369 aaPredicted RBP13.52□□□□□ -0.25
SRRM1-216ENST00000489130 BLZF1Q9H2G9 400 aa13.52□□□□□ -0.25
SRRM1-216ENST00000489130 KIAA1586Q9HCI6 787 aa13.52□□□□□ -0.25
SRRM1-216ENST00000489130 AGPAT3Q9NRZ7 376 aa13.52□□□□□ -0.25
SRRM1-216ENST00000489130 INTS13Q9NVM9 706 aa13.52□□□□□ -0.25
SRRM1-216ENST00000489130 GDAP2Q9NXN4 497 aa13.52□□□□□ -0.25
SRRM1-216ENST00000489130 PTPRJQ12913 1337 aa13.52□□□□□ -0.25
SRRM1-216ENST00000489130 COL4A3Q01955 1670 aa13.51□□□□□ -0.25
SRRM1-216ENST00000489130 A0A1W2PRU2 124 aa13.51□□□□□ -0.25
SRRM1-216ENST00000489130 FGF19O95750 216 aa13.51□□□□□ -0.25
SRRM1-216ENST00000489130 DCNP07585 359 aaKnown RBP13.51□□□□□ -0.25
SRRM1-216ENST00000489130 TMEM191BP0C7N4 346 aa13.51□□□□□ -0.25
SRRM1-216ENST00000489130 GLULP15104 373 aa13.51□□□□□ -0.25
SRRM1-216ENST00000489130 ATF6P18850 670 aa13.51□□□□□ -0.25
SRRM1-216ENST00000489130 SNRPFP62306 86 aaKnown RBP13.51□□□□□ -0.25
SRRM1-216ENST00000489130 RBP5P82980 135 aa13.51□□□□□ -0.25
SRRM1-216ENST00000489130 CUL4BQ13620 913 aa13.51□□□□□ -0.25
SRRM1-216ENST00000489130 GRM2Q14416 872 aa13.51□□□□□ -0.25
SRRM1-216ENST00000489130 BMT2Q1RMZ1 405 aa13.51□□□□□ -0.25
SRRM1-216ENST00000489130 MGAT5BQ3V5L5 792 aa13.51□□□□□ -0.25
SRRM1-216ENST00000489130 VITQ6UXI7 678 aa13.51□□□□□ -0.25
SRRM1-216ENST00000489130 GAREM2Q75VX8 874 aa13.51□□□□□ -0.25
SRRM1-216ENST00000489130 WDR49Q8IV35 697 aa13.51□□□□□ -0.25
SRRM1-216ENST00000489130 DCP1BQ8IZD4 617 aaKnown RBP13.51□□□□□ -0.25
SRRM1-216ENST00000489130 TMEM86AQ8N2M4 240 aa13.51□□□□□ -0.25
SRRM1-216ENST00000489130 OR5B17Q8NGF7 314 aa13.51□□□□□ -0.25
SRRM1-216ENST00000489130 DEPDC1BQ8WUY9 529 aa13.51□□□□□ -0.25
SRRM1-216ENST00000489130 ANKRD36BP1Q96IX9 119 aa13.51□□□□□ -0.25
SRRM1-216ENST00000489130 MKNK1Q9BUB5 465 aa13.51□□□□□ -0.25
SRRM1-216ENST00000489130 TRMT61BQ9BVS5 477 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms