RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 STXBP5LQ9Y2K9 1186 aa6.06□□□□□ -1.44
VPS8-224ENST00000488255 NEU2Q9Y3R4 380 aa6.06□□□□□ -1.44
VPS8-224ENST00000488255 CHRM2P08172 466 aa6.05□□□□□ -1.44
VPS8-224ENST00000488255 LPOP22079 712 aaPredicted RBP6.05□□□□□ -1.44
VPS8-224ENST00000488255 NPTX2P47972 431 aa6.05□□□□□ -1.44
VPS8-224ENST00000488255 NANOS3P60323 173 aaKnown RBP6.05□□□□□ -1.44
VPS8-224ENST00000488255 POU6F2P78424 691 aaPredicted RBP6.05□□□□□ -1.44
VPS8-224ENST00000488255 LRRC41Q15345 812 aa6.05□□□□□ -1.44
VPS8-224ENST00000488255 KHDC1LQ5JSQ8 128 aa6.05□□□□□ -1.44
VPS8-224ENST00000488255 TAF2Q6P1X5 1199 aa6.05□□□□□ -1.44
VPS8-224ENST00000488255 LNX2Q8N448 690 aa6.05□□□□□ -1.44
VPS8-224ENST00000488255 B3GALNT2Q8NCR0 500 aa6.05□□□□□ -1.44
VPS8-224ENST00000488255 PSD4Q8NDX1 1056 aa6.05□□□□□ -1.44
VPS8-224ENST00000488255 PPP1R35Q8TAP8 253 aa6.05□□□□□ -1.44
VPS8-224ENST00000488255 KLHDC4Q8TBB5 520 aa6.05□□□□□ -1.44
VPS8-224ENST00000488255 BRIX1Q8TDN6 353 aaKnown RBP6.05□□□□□ -1.44
VPS8-224ENST00000488255 TFAP2BQ92481 460 aa6.05□□□□□ -1.44
VPS8-224ENST00000488255 C1GALT1C1Q96EU7 318 aa6.05□□□□□ -1.44
VPS8-224ENST00000488255 FAM167AQ96KS9 214 aa6.05□□□□□ -1.44
VPS8-224ENST00000488255 CRAMP1Q96RY5 1269 aa6.05□□□□□ -1.44
VPS8-224ENST00000488255 CNPPD1Q9BV87 410 aa6.05□□□□□ -1.44
VPS8-224ENST00000488255 CDH19Q9H159 772 aa6.05□□□□□ -1.44
VPS8-224ENST00000488255 SLC12A5Q9H2X9 1139 aa6.05□□□□□ -1.44
VPS8-224ENST00000488255 SYNPO2LQ9H987 977 aa6.05□□□□□ -1.44
VPS8-224ENST00000488255 GPR35Q9HC97 309 aa6.05□□□□□ -1.44
VPS8-224ENST00000488255 KIAA1586Q9HCI6 787 aa6.05□□□□□ -1.44
VPS8-224ENST00000488255 NMRK2Q9NPI5 230 aa6.05□□□□□ -1.44
VPS8-224ENST00000488255 RLIMQ9NVW2 624 aa6.05□□□□□ -1.44
VPS8-224ENST00000488255 ZDHHC8Q9ULC8 765 aa6.05□□□□□ -1.44
VPS8-224ENST00000488255 G3BP2Q9UN86 482 aaKnown RBP6.05□□□□□ -1.44
VPS8-224ENST00000488255 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.05□□□□□ -1.44
VPS8-224ENST00000488255 ARHGEF17Q96PE2 2063 aaPredicted RBP6.04□□□□□ -1.44
VPS8-224ENST00000488255 ZAR1LA6NP61 321 aa6.04□□□□□ -1.44
VPS8-224ENST00000488255 PPP3CBP16298 524 aa6.04□□□□□ -1.44
VPS8-224ENST00000488255 TYRP1P17643 537 aa6.04□□□□□ -1.44
VPS8-224ENST00000488255 NDUFV1P49821 464 aa6.04□□□□□ -1.44
VPS8-224ENST00000488255 NKX6-1P78426 367 aaPredicted RBP6.04□□□□□ -1.44
VPS8-224ENST00000488255 STRIP1Q5VSL9 837 aa6.04□□□□□ -1.44
VPS8-224ENST00000488255 MICALCLQ6ZW33 695 aa6.04□□□□□ -1.44
VPS8-224ENST00000488255 FAM46DQ8NEK8 389 aa6.04□□□□□ -1.44
VPS8-224ENST00000488255 PLBD2Q8NHP8 589 aa6.04□□□□□ -1.44
VPS8-224ENST00000488255 MTFMTQ96DP5 389 aaKnown RBP6.04□□□□□ -1.44
VPS8-224ENST00000488255 RSAD1Q9HA92 442 aa6.04□□□□□ -1.44
VPS8-224ENST00000488255 SARS2Q9NP81 518 aaKnown RBP6.04□□□□□ -1.44
VPS8-224ENST00000488255 ANLNQ9NQW6 1124 aa6.04□□□□□ -1.44
VPS8-224ENST00000488255 ETAA1Q9NY74 926 aa6.04□□□□□ -1.44
VPS8-224ENST00000488255 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.03□□□□□ -1.44
VPS8-224ENST00000488255 A0A0B4J269 797 aa6.03□□□□□ -1.44
VPS8-224ENST00000488255 OVOL3O00110 214 aa6.03□□□□□ -1.44
VPS8-224ENST00000488255 PPFIA2O75334 1257 aa6.03□□□□□ -1.44
VPS8-224ENST00000488255 CHEK2O96017 543 aa6.03□□□□□ -1.44
VPS8-224ENST00000488255 HNRNPMP52272 730 aaKnown RBP eCLIP6.03□□□□□ -1.44
VPS8-224ENST00000488255 SOX8P57073 446 aa6.03□□□□□ -1.44
VPS8-224ENST00000488255 SIM1P81133 766 aaPredicted RBP6.03□□□□□ -1.44
VPS8-224ENST00000488255 PURAQ00577 322 aaKnown RBP6.03□□□□□ -1.44
VPS8-224ENST00000488255 TUBB3Q13509 450 aa6.03□□□□□ -1.44
VPS8-224ENST00000488255 ZNF169Q14929 603 aaPredicted RBP6.03□□□□□ -1.44
VPS8-224ENST00000488255 VWA1Q6PCB0 445 aa6.03□□□□□ -1.44
VPS8-224ENST00000488255 DENND1CQ8IV53 801 aa6.03□□□□□ -1.44
VPS8-224ENST00000488255 FAM9AQ8IZU1 332 aaPredicted RBP6.03□□□□□ -1.44
VPS8-224ENST00000488255 MYCBPAPQ8TBZ2 947 aa6.03□□□□□ -1.44
VPS8-224ENST00000488255 POC1BQ8TC44 478 aa6.03□□□□□ -1.44
VPS8-224ENST00000488255 JDP2Q8WYK2 163 aa6.03□□□□□ -1.44
VPS8-224ENST00000488255 ACO2Q99798 780 aaKnown RBP6.03□□□□□ -1.44
VPS8-224ENST00000488255 TPSD1Q9BZJ3 242 aa6.03□□□□□ -1.44
VPS8-224ENST00000488255 TTYH3Q9C0H2 523 aa6.03□□□□□ -1.44
VPS8-224ENST00000488255 SIK2Q9H0K1 926 aa6.03□□□□□ -1.44
VPS8-224ENST00000488255 TLK1Q9UKI8 766 aa6.03□□□□□ -1.44
VPS8-224ENST00000488255 RAD54BQ9Y620 910 aa6.03□□□□□ -1.44
VPS8-224ENST00000488255 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.03□□□□□ -1.44
VPS8-224ENST00000488255 MGST3O14880 152 aa6.02□□□□□ -1.45
VPS8-224ENST00000488255 SRGNP10124 158 aa6.02□□□□□ -1.45
VPS8-224ENST00000488255 HTR1BP28222 390 aa6.02□□□□□ -1.45
VPS8-224ENST00000488255 FOLR3P41439 243 aa6.02□□□□□ -1.45
VPS8-224ENST00000488255 CLK3P49761 638 aaKnown RBP6.02□□□□□ -1.45
VPS8-224ENST00000488255 HLXQ14774 488 aaPredicted RBP6.02□□□□□ -1.45
VPS8-224ENST00000488255 PPP2R5AQ15172 486 aa6.02□□□□□ -1.45
VPS8-224ENST00000488255 PRR16Q569H4 304 aa6.02□□□□□ -1.45
VPS8-224ENST00000488255 KAZNQ674X7 775 aa6.02□□□□□ -1.45
VPS8-224ENST00000488255 EPM2AIP1Q7L775 607 aaPredicted RBP6.02□□□□□ -1.45
VPS8-224ENST00000488255 DAAM2Q86T65 1068 aa6.02□□□□□ -1.45
VPS8-224ENST00000488255 CHPFQ8IZ52 775 aa6.02□□□□□ -1.45
VPS8-224ENST00000488255 ZBTB34Q8NCN2 500 aa6.02□□□□□ -1.45
VPS8-224ENST00000488255 SLC35G2Q8TBE7 412 aa6.02□□□□□ -1.45
VPS8-224ENST00000488255 CAGE1Q8TC20 777 aa6.02□□□□□ -1.45
VPS8-224ENST00000488255 AIFM3Q96NN9 605 aa6.02□□□□□ -1.45
VPS8-224ENST00000488255 NT5C1BQ96P26 610 aa6.02□□□□□ -1.45
VPS8-224ENST00000488255 IL17RBQ9NRM6 502 aa6.02□□□□□ -1.45
VPS8-224ENST00000488255 CNNM1Q9NRU3 951 aa6.02□□□□□ -1.45
VPS8-224ENST00000488255 E7ENX8 843 aa6.01□□□□□ -1.45
VPS8-224ENST00000488255 PRPF3O43395 683 aaKnown RBP6.01□□□□□ -1.45
VPS8-224ENST00000488255 UBXN7O94888 489 aa6.01□□□□□ -1.45
VPS8-224ENST00000488255 UNC5CO95185 931 aa6.01□□□□□ -1.45
VPS8-224ENST00000488255 SCGB1D2O95969 90 aa6.01□□□□□ -1.45
VPS8-224ENST00000488255 RHOP08100 348 aa6.01□□□□□ -1.45
VPS8-224ENST00000488255 HMGB1P09429 215 aaKnown RBP6.01□□□□□ -1.45
VPS8-224ENST00000488255 ITGALP20701 1170 aa6.01□□□□□ -1.45
VPS8-224ENST00000488255 RAB1AP62820 205 aa6.01□□□□□ -1.45
VPS8-224ENST00000488255 TAP2Q03519 686 aa6.01□□□□□ -1.45
VPS8-224ENST00000488255 BOP1Q14137 746 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms