RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 PPP4R4Q6NUP7 873 aa5.11□□□□□ -1.59
TTC3-220ENST00000487711 SUPT20HQ8NEM7 779 aa5.11□□□□□ -1.59
TTC3-220ENST00000487711 TTC8Q8TAM2 541 aa5.11□□□□□ -1.59
TTC3-220ENST00000487711 NT5C1BQ96P26 610 aa5.11□□□□□ -1.59
TTC3-220ENST00000487711 SORCS2Q96PQ0 1159 aa5.11□□□□□ -1.59
TTC3-220ENST00000487711 TMEM60Q9H2L4 133 aa5.11□□□□□ -1.59
TTC3-220ENST00000487711 MRPS18AQ9NVS2 196 aaKnown RBP5.11□□□□□ -1.59
TTC3-220ENST00000487711 PIH1D1Q9NWS0 290 aaKnown RBP5.11□□□□□ -1.59
TTC3-220ENST00000487711 DDX20Q9UHI6 824 aaKnown RBP5.11□□□□□ -1.59
TTC3-220ENST00000487711 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.11□□□□□ -1.59
TTC3-220ENST00000487711 CAPN8A6NHC0 703 aa5.1□□□□□ -1.59
TTC3-220ENST00000487711 MARCH6O60337 910 aa5.1□□□□□ -1.59
TTC3-220ENST00000487711 RAMP2O60895 175 aa5.1□□□□□ -1.59
TTC3-220ENST00000487711 HKR1P10072 659 aa5.1□□□□□ -1.59
TTC3-220ENST00000487711 CHRM3P20309 590 aa5.1□□□□□ -1.59
TTC3-220ENST00000487711 INHBCP55103 352 aa5.1□□□□□ -1.59
TTC3-220ENST00000487711 TGFB2P61812 414 aa5.1□□□□□ -1.59
TTC3-220ENST00000487711 GPSM2P81274 684 aa5.1□□□□□ -1.59
TTC3-220ENST00000487711 SCAPQ12770 1279 aa5.1□□□□□ -1.59
TTC3-220ENST00000487711 Q6YL49 198 aa5.1□□□□□ -1.59
TTC3-220ENST00000487711 MRGPRGQ86SM5 289 aa5.1□□□□□ -1.59
TTC3-220ENST00000487711 ADGRG5Q8IZF4 528 aa5.1□□□□□ -1.59
TTC3-220ENST00000487711 SLC44A3Q8N4M1 653 aa5.1□□□□□ -1.59
TTC3-220ENST00000487711 PSD4Q8NDX1 1056 aa5.1□□□□□ -1.59
TTC3-220ENST00000487711 BEND2Q8NDZ0 799 aa5.1□□□□□ -1.59
TTC3-220ENST00000487711 FAM46DQ8NEK8 389 aa5.1□□□□□ -1.59
TTC3-220ENST00000487711 SNX19Q92543 992 aa5.1□□□□□ -1.59
TTC3-220ENST00000487711 CAVIN3Q969G5 261 aa5.1□□□□□ -1.59
TTC3-220ENST00000487711 FUBP1Q96AE4 644 aaKnown RBP5.1□□□□□ -1.59
TTC3-220ENST00000487711 LRIG1Q96JA1 1093 aa5.1□□□□□ -1.59
TTC3-220ENST00000487711 Q96MF0 132 aa5.1□□□□□ -1.59
TTC3-220ENST00000487711 ZMAT3Q9HA38 289 aaKnown RBP5.1□□□□□ -1.59
TTC3-220ENST00000487711 INTS13Q9NVM9 706 aa5.1□□□□□ -1.59
TTC3-220ENST00000487711 ETAA1Q9NY74 926 aa5.1□□□□□ -1.59
TTC3-220ENST00000487711 CHPF2Q9P2E5 772 aa5.1□□□□□ -1.59
TTC3-220ENST00000487711 DMTF1Q9Y222 760 aa5.1□□□□□ -1.59
TTC3-220ENST00000487711 FRMPD2Q68DX3 1309 aaPredicted RBP5.09□□□□□ -1.59
TTC3-220ENST00000487711 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.09□□□□□ -1.59
TTC3-220ENST00000487711 GRID2IPA4D2P6 1211 aa5.09□□□□□ -1.59
TTC3-220ENST00000487711 CFAP69A5D8W1 941 aa5.09□□□□□ -1.59
TTC3-220ENST00000487711 FOXN1O15353 648 aa5.09□□□□□ -1.59
TTC3-220ENST00000487711 PHGDHO43175 533 aaKnown RBP5.09□□□□□ -1.59
TTC3-220ENST00000487711 UNC5CO95185 931 aa5.09□□□□□ -1.59
TTC3-220ENST00000487711 GRPP07492 148 aa5.09□□□□□ -1.59
TTC3-220ENST00000487711 KITP10721 976 aa5.09□□□□□ -1.59
TTC3-220ENST00000487711 PIM1P11309 404 aaPredicted RBP5.09□□□□□ -1.59
TTC3-220ENST00000487711 KRT4P19013 534 aa5.09□□□□□ -1.59
TTC3-220ENST00000487711 DPTQ07507 201 aa5.09□□□□□ -1.59
TTC3-220ENST00000487711 HLXQ14774 488 aaPredicted RBP5.09□□□□□ -1.59
TTC3-220ENST00000487711 GRM3Q14832 879 aa5.09□□□□□ -1.59
TTC3-220ENST00000487711 HECTD2Q5U5R9 776 aa5.09□□□□□ -1.59
TTC3-220ENST00000487711 FAM160B1Q5W0V3 765 aa5.09□□□□□ -1.59
TTC3-220ENST00000487711 TAF2Q6P1X5 1199 aa5.09□□□□□ -1.59
TTC3-220ENST00000487711 Q6ZPA2 131 aa5.09□□□□□ -1.59
TTC3-220ENST00000487711 MAEAQ7L5Y9 396 aa5.09□□□□□ -1.59
TTC3-220ENST00000487711 COL23A1Q86Y22 540 aaPredicted RBP5.09□□□□□ -1.59
TTC3-220ENST00000487711 LDLRAD3Q86YD5 345 aa5.09□□□□□ -1.59
TTC3-220ENST00000487711 POC1BQ8TC44 478 aa5.09□□□□□ -1.59
TTC3-220ENST00000487711 SSH3Q8TE77 659 aa5.09□□□□□ -1.59
TTC3-220ENST00000487711 FBXO41Q8TF61 875 aa5.09□□□□□ -1.59
TTC3-220ENST00000487711 MRGPRX1Q96LB2 322 aa5.09□□□□□ -1.59
TTC3-220ENST00000487711 P2RX7Q99572 595 aaKnown RBP5.09□□□□□ -1.59
TTC3-220ENST00000487711 MRIQ9BWK5 157 aa5.09□□□□□ -1.59
TTC3-220ENST00000487711 PRDM11Q9NQV5 511 aa5.09□□□□□ -1.59
TTC3-220ENST00000487711 OBP2AQ9NY56 170 aa5.09□□□□□ -1.59
TTC3-220ENST00000487711 RAD54BQ9Y620 910 aa5.09□□□□□ -1.59
TTC3-220ENST00000487711 COL4A3Q01955 1670 aa5.08□□□□□ -1.6
TTC3-220ENST00000487711 A6NNZ2 444 aa5.08□□□□□ -1.6
TTC3-220ENST00000487711 E7ENX8 843 aa5.08□□□□□ -1.6
TTC3-220ENST00000487711 F5H697 171 aa5.08□□□□□ -1.6
TTC3-220ENST00000487711 DNAJB5O75953 348 aa5.08□□□□□ -1.6
TTC3-220ENST00000487711 GCP02774 474 aa5.08□□□□□ -1.6
TTC3-220ENST00000487711 NPR1P16066 1061 aa5.08□□□□□ -1.6
TTC3-220ENST00000487711 ITGALP20701 1170 aa5.08□□□□□ -1.6
TTC3-220ENST00000487711 GATA3P23771 443 aa5.08□□□□□ -1.6
TTC3-220ENST00000487711 NPTX2P47972 431 aa5.08□□□□□ -1.6
TTC3-220ENST00000487711 NDUFV1P49821 464 aa5.08□□□□□ -1.6
TTC3-220ENST00000487711 HMGA2P52926 109 aa5.08□□□□□ -1.6
TTC3-220ENST00000487711 TAP2Q03519 686 aa5.08□□□□□ -1.6
TTC3-220ENST00000487711 SF3B3Q15393 1217 aaKnown RBP5.08□□□□□ -1.6
TTC3-220ENST00000487711 CNN3Q15417 329 aaKnown RBP5.08□□□□□ -1.6
TTC3-220ENST00000487711 AMOTQ4VCS5 1084 aa5.08□□□□□ -1.6
TTC3-220ENST00000487711 CCDC149Q6ZUS6 474 aa5.08□□□□□ -1.6
TTC3-220ENST00000487711 MICALCLQ6ZW33 695 aa5.08□□□□□ -1.6
TTC3-220ENST00000487711 PPP1R32Q7Z5V6 425 aa5.08□□□□□ -1.6
TTC3-220ENST00000487711 KIAA0319LQ8IZA0 1049 aa5.08□□□□□ -1.6
TTC3-220ENST00000487711 SLC30A5Q8TAD4 765 aa5.08□□□□□ -1.6
TTC3-220ENST00000487711 COQ10AQ96MF6 247 aa5.08□□□□□ -1.6
TTC3-220ENST00000487711 AIFM2Q9BRQ8 373 aa5.08□□□□□ -1.6
TTC3-220ENST00000487711 SMOC2Q9H3U7 446 aa5.08□□□□□ -1.6
TTC3-220ENST00000487711 SYBUQ9NX95 663 aa5.08□□□□□ -1.6
TTC3-220ENST00000487711 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.08□□□□□ -1.6
TTC3-220ENST00000487711 L1RE1Q9UN81 338 aa5.08□□□□□ -1.6
TTC3-220ENST00000487711 MED16Q9Y2X0 877 aa5.08□□□□□ -1.6
TTC3-220ENST00000487711 PLEKHM1Q9Y4G2 1056 aa5.08□□□□□ -1.6
TTC3-220ENST00000487711 MAST3O60307 1309 aa5.07□□□□□ -1.6
TTC3-220ENST00000487711 SPATA31A3Q5VYP0 1347 aa5.07□□□□□ -1.6
TTC3-220ENST00000487711 WDR33Q9C0J8 1336 aaKnown RBP5.07□□□□□ -1.6
TTC3-220ENST00000487711 A0A087X1B8 175 aa5.07□□□□□ -1.6
TTC3-220ENST00000487711 A0A0B4J269 797 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms