RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 NIF3L1Q9GZT8 377 aa14.26□□□□□ -0.13
COL4A6-207ENST00000487645 NSUN3Q9H649 340 aaKnown RBP14.26□□□□□ -0.13
COL4A6-207ENST00000487645 POLIQ9UNA4 740 aa14.26□□□□□ -0.13
COL4A6-207ENST00000487645 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.25□□□□□ -0.13
COL4A6-207ENST00000487645 FSD2A1L4K1 749 aa14.25□□□□□ -0.13
COL4A6-207ENST00000487645 LGALS16A8MUM7 142 aa14.25□□□□□ -0.13
COL4A6-207ENST00000487645 SERPINC1P01008 464 aa14.25□□□□□ -0.13
COL4A6-207ENST00000487645 CNPP09543 421 aaKnown RBP14.25□□□□□ -0.13
COL4A6-207ENST00000487645 IGFBP4P22692 258 aa14.25□□□□□ -0.13
COL4A6-207ENST00000487645 TBXAS1P24557 533 aaPredicted RBP14.25□□□□□ -0.13
COL4A6-207ENST00000487645 PON1P27169 355 aa14.25□□□□□ -0.13
COL4A6-207ENST00000487645 GNL1P36915 607 aaPredicted RBP14.25□□□□□ -0.13
COL4A6-207ENST00000487645 NDUFV1P49821 464 aa14.25□□□□□ -0.13
COL4A6-207ENST00000487645 CTXN3Q4LDR2 81 aa14.25□□□□□ -0.13
COL4A6-207ENST00000487645 SMYD5Q6GMV2 418 aa14.25□□□□□ -0.13
COL4A6-207ENST00000487645 SLC8B1Q6J4K2 584 aa14.25□□□□□ -0.13
COL4A6-207ENST00000487645 ZNF280DQ6N043 979 aa14.25□□□□□ -0.13
COL4A6-207ENST00000487645 TRIM65Q6PJ69 517 aa14.25□□□□□ -0.13
COL4A6-207ENST00000487645 PPFIBP1Q86W92 1011 aa14.25□□□□□ -0.13
COL4A6-207ENST00000487645 ADGRF2Q8IZF7 708 aa14.25□□□□□ -0.13
COL4A6-207ENST00000487645 KBTBD7Q8WVZ9 684 aa14.25□□□□□ -0.13
COL4A6-207ENST00000487645 JAKMIP2Q96AA8 810 aa14.25□□□□□ -0.13
COL4A6-207ENST00000487645 GUCD1Q96NT3 240 aa14.25□□□□□ -0.13
COL4A6-207ENST00000487645 KLHL5Q96PQ7 755 aa14.25□□□□□ -0.13
COL4A6-207ENST00000487645 ACBD6Q9BR61 282 aa14.25□□□□□ -0.13
COL4A6-207ENST00000487645 CRACR2AQ9BSW2 395 aa14.25□□□□□ -0.13
COL4A6-207ENST00000487645 INTS2Q9H0H0 1204 aaKnown RBP14.25□□□□□ -0.13
COL4A6-207ENST00000487645 SNX25Q9H3E2 840 aa14.25□□□□□ -0.13
COL4A6-207ENST00000487645 TLE6Q9H808 572 aa14.25□□□□□ -0.13
COL4A6-207ENST00000487645 RTN4Q9NQC3 1192 aaKnown RBP14.25□□□□□ -0.13
COL4A6-207ENST00000487645 GCNT4Q9P109 453 aa14.25□□□□□ -0.13
COL4A6-207ENST00000487645 FBXL5Q9UKA1 691 aa14.25□□□□□ -0.13
COL4A6-207ENST00000487645 PLXNA3P51805 1871 aa14.25□□□□□ -0.13
COL4A6-207ENST00000487645 TEX28O15482 410 aa14.24□□□□□ -0.13
COL4A6-207ENST00000487645 NCK2O43639 380 aa14.24□□□□□ -0.13
COL4A6-207ENST00000487645 CLSTN1O94985 981 aa14.24□□□□□ -0.13
COL4A6-207ENST00000487645 ADH1AP07327 375 aa14.24□□□□□ -0.13
COL4A6-207ENST00000487645 SLC9A1P19634 815 aa14.24□□□□□ -0.13
COL4A6-207ENST00000487645 KLRC2P26717 231 aa14.24□□□□□ -0.13
COL4A6-207ENST00000487645 PCSK1P29120 753 aa14.24□□□□□ -0.13
COL4A6-207ENST00000487645 CA8P35219 290 aa14.24□□□□□ -0.13
COL4A6-207ENST00000487645 ASPAP45381 313 aa14.24□□□□□ -0.13
COL4A6-207ENST00000487645 CDH8P55286 799 aa14.24□□□□□ -0.13
COL4A6-207ENST00000487645 FANCCQ00597 558 aa14.24□□□□□ -0.13
COL4A6-207ENST00000487645 UBXN1Q04323 297 aa14.24□□□□□ -0.13
COL4A6-207ENST00000487645 KCNMA1Q12791 1236 aa14.24□□□□□ -0.13
COL4A6-207ENST00000487645 RAB33AQ14088 237 aa14.24□□□□□ -0.13
COL4A6-207ENST00000487645 NR1I3Q14994 352 aa14.24□□□□□ -0.13
COL4A6-207ENST00000487645 DUSP6Q16828 381 aa14.24□□□□□ -0.13
COL4A6-207ENST00000487645 ENOSF1Q7L5Y1 443 aa14.24□□□□□ -0.13
COL4A6-207ENST00000487645 RNF214Q8ND24 703 aa14.24□□□□□ -0.13
COL4A6-207ENST00000487645 MYLIPQ8WY64 445 aa14.24□□□□□ -0.13
COL4A6-207ENST00000487645 ELMO3Q96BJ8 720 aa14.24□□□□□ -0.13
COL4A6-207ENST00000487645 ERGIC2Q96RQ1 377 aa14.24□□□□□ -0.13
COL4A6-207ENST00000487645 RTP3Q9BQQ7 232 aa14.24□□□□□ -0.13
COL4A6-207ENST00000487645 SMYD3Q9H7B4 428 aa14.24□□□□□ -0.13
COL4A6-207ENST00000487645 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.24□□□□□ -0.13
COL4A6-207ENST00000487645 DDX43Q9NXZ2 648 aaKnown RBP14.24□□□□□ -0.13
COL4A6-207ENST00000487645 STXBP5LQ9Y2K9 1186 aa14.24□□□□□ -0.13
COL4A6-207ENST00000487645 PCDHGC5Q9Y5F6 944 aa14.24□□□□□ -0.13
COL4A6-207ENST00000487645 MYH10P35580 1976 aa14.23□□□□□ -0.13
COL4A6-207ENST00000487645 A0A1B0GTH6 734 aa14.23□□□□□ -0.13
COL4A6-207ENST00000487645 CLASP2O75122 1294 aaKnown RBP14.23□□□□□ -0.13
COL4A6-207ENST00000487645 WEE2P0C1S8 567 aa14.23□□□□□ -0.13
COL4A6-207ENST00000487645 OR1D2P34982 312 aa14.23□□□□□ -0.13
COL4A6-207ENST00000487645 UBASH3AP57075 661 aa14.23□□□□□ -0.13
COL4A6-207ENST00000487645 YWHAEP62258 255 aaKnown RBP14.23□□□□□ -0.13
COL4A6-207ENST00000487645 GCNT1Q02742 428 aa14.23□□□□□ -0.13
COL4A6-207ENST00000487645 INCA1Q0VD86 236 aa14.23□□□□□ -0.13
COL4A6-207ENST00000487645 SMARCB1Q12824 385 aa14.23□□□□□ -0.13
COL4A6-207ENST00000487645 LRMPQ12912 555 aa14.23□□□□□ -0.13
COL4A6-207ENST00000487645 CUL2Q13617 745 aa14.23□□□□□ -0.13
COL4A6-207ENST00000487645 TCEAL5Q5H9L2 206 aa14.23□□□□□ -0.13
COL4A6-207ENST00000487645 PHLDB3Q6NSJ2 640 aa14.23□□□□□ -0.13
COL4A6-207ENST00000487645 RSPO2Q6UXX9 243 aaPredicted RBP14.23□□□□□ -0.13
COL4A6-207ENST00000487645 ADGRD2Q7Z7M1 963 aa14.23□□□□□ -0.13
COL4A6-207ENST00000487645 UNC93AQ86WB7 457 aa14.23□□□□□ -0.13
COL4A6-207ENST00000487645 GAS2L3Q86XJ1 694 aa14.23□□□□□ -0.13
COL4A6-207ENST00000487645 OR6B3Q8NGW1 331 aa14.23□□□□□ -0.13
COL4A6-207ENST00000487645 ZNF461Q8TAF7 563 aa14.23□□□□□ -0.13
COL4A6-207ENST00000487645 MRPL45Q9BRJ2 306 aaKnown RBP14.23□□□□□ -0.13
COL4A6-207ENST00000487645 DNAI2Q9GZS0 605 aa14.23□□□□□ -0.13
COL4A6-207ENST00000487645 SDCBP2Q9H190 292 aa14.23□□□□□ -0.13
COL4A6-207ENST00000487645 RBSNQ9H1K0 784 aa14.23□□□□□ -0.13
COL4A6-207ENST00000487645 PLCB1Q9NQ66 1216 aa14.23□□□□□ -0.13
COL4A6-207ENST00000487645 APEX2Q9UBZ4 518 aa14.23□□□□□ -0.13
COL4A6-207ENST00000487645 CDH9Q9ULB4 789 aa14.23□□□□□ -0.13
COL4A6-207ENST00000487645 MAFFQ9ULX9 164 aa14.23□□□□□ -0.13
COL4A6-207ENST00000487645 BARX2Q9UMQ3 279 aaPredicted RBP14.23□□□□□ -0.13
COL4A6-207ENST00000487645 CDY1Q9Y6F8 540 aa14.23□□□□□ -0.13
COL4A6-207ENST00000487645 ADAM12O43184 909 aa14.22□□□□□ -0.13
COL4A6-207ENST00000487645 ABLIM3O94929 683 aa14.22□□□□□ -0.13
COL4A6-207ENST00000487645 CSPG5O95196 566 aa14.22□□□□□ -0.13
COL4A6-207ENST00000487645 PDGFRBP09619 1106 aa14.22□□□□□ -0.13
COL4A6-207ENST00000487645 FOSL2P15408 326 aa14.22□□□□□ -0.13
COL4A6-207ENST00000487645 RPL17P18621 184 aaKnown RBP14.22□□□□□ -0.13
COL4A6-207ENST00000487645 LMO2P25791 158 aa14.22□□□□□ -0.13
COL4A6-207ENST00000487645 NRIP1P48552 1158 aa14.22□□□□□ -0.13
COL4A6-207ENST00000487645 MFAP3P55082 362 aa14.22□□□□□ -0.13
COL4A6-207ENST00000487645 TSPY1Q01534 308 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms