RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 TAF6P49848 677 aa13.14□□□□□ -0.31
TRA2B-213ENST00000485530 ZXDAP98168 799 aa13.14□□□□□ -0.31
TRA2B-213ENST00000485530 APBA1Q02410 837 aa13.14□□□□□ -0.31
TRA2B-213ENST00000485530 KRT31Q15323 416 aa13.14□□□□□ -0.31
TRA2B-213ENST00000485530 PTPN14Q15678 1187 aa13.14□□□□□ -0.31
TRA2B-213ENST00000485530 SGSM1Q2NKQ1 1148 aa13.14□□□□□ -0.31
TRA2B-213ENST00000485530 USP41Q3LFD5 358 aa13.14□□□□□ -0.31
TRA2B-213ENST00000485530 WSCD1Q658N2 575 aa13.14□□□□□ -0.31
TRA2B-213ENST00000485530 TMC7Q7Z402 723 aa13.14□□□□□ -0.31
TRA2B-213ENST00000485530 ADGRD2Q7Z7M1 963 aa13.14□□□□□ -0.31
TRA2B-213ENST00000485530 CEP57Q86XR8 500 aa13.14□□□□□ -0.31
TRA2B-213ENST00000485530 TCF25Q9BQ70 676 aa13.14□□□□□ -0.31
TRA2B-213ENST00000485530 RTP3Q9BQQ7 232 aa13.14□□□□□ -0.31
TRA2B-213ENST00000485530 TTPALQ9BTX7 342 aa13.14□□□□□ -0.31
TRA2B-213ENST00000485530 HERC2P3Q9BVR0 1158 aa13.14□□□□□ -0.31
TRA2B-213ENST00000485530 TSPY26PQ9H489 355 aa13.14□□□□□ -0.31
TRA2B-213ENST00000485530 VRTNQ9H8Y1 702 aa13.14□□□□□ -0.31
TRA2B-213ENST00000485530 TLR9Q9NR96 1032 aa13.14□□□□□ -0.31
TRA2B-213ENST00000485530 RAB20Q9NX57 234 aa13.14□□□□□ -0.31
TRA2B-213ENST00000485530 TAB2Q9NYJ8 693 aa13.14□□□□□ -0.31
TRA2B-213ENST00000485530 LIMA1Q9UHB6 759 aaKnown RBP13.14□□□□□ -0.31
TRA2B-213ENST00000485530 PCDHB8Q9UN66 801 aa13.14□□□□□ -0.31
TRA2B-213ENST00000485530 NME7Q9Y5B8 376 aa13.14□□□□□ -0.31
TRA2B-213ENST00000485530 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.14□□□□□ -0.31
TRA2B-213ENST00000485530 PLXNA3P51805 1871 aa13.14□□□□□ -0.31
TRA2B-213ENST00000485530 SF3B1O75533 1304 aaKnown RBP eCLIP13.13□□□□□ -0.315e-6■■■■■ 39
TRA2B-213ENST00000485530 CARNS1A5YM72 827 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 LOC730098B7Z3J9 87 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 PER2O15055 1255 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 HCRTO43612 131 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 TRAPPC3O43617 180 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 OAZ2O95190 189 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 STAU1O95793 577 aaKnown RBP13.13□□□□□ -0.31
TRA2B-213ENST00000485530 AFPP02771 609 aaKnown RBP13.13□□□□□ -0.31
TRA2B-213ENST00000485530 CYP11A1P05108 521 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 CNPP09543 421 aaKnown RBP13.13□□□□□ -0.31
TRA2B-213ENST00000485530 EEF1GP26641 437 aaKnown RBP13.13□□□□□ -0.31
TRA2B-213ENST00000485530 MTIF2P46199 727 aaKnown RBP13.13□□□□□ -0.31
TRA2B-213ENST00000485530 MXI1P50539 228 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 VCPP55072 806 aaKnown RBP13.13□□□□□ -0.31
TRA2B-213ENST00000485530 CDH8P55286 799 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 KCNMA1Q12791 1236 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 TRPC3Q13507 836 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 WDR72Q3MJ13 1102 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 VWA3BQ502W6 1294 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 PLPP4Q5VZY2 271 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 DSTYKQ6XUX3 929 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 USP37Q86T82 979 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 OSTM1Q86WC4 334 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 PDCL2Q8N4E4 241 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 EHBP1Q8NDI1 1231 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 FBXL13Q8NEE6 735 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 MICAL1Q8TDZ2 1067 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 RIN2Q8WYP3 895 aaPredicted RBP13.13□□□□□ -0.31
TRA2B-213ENST00000485530 MSLNLQ96KJ4 702 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 CLSTN3Q9BQT9 956 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 VPS16Q9H269 839 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 NDST4Q9H3R1 872 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 RXFP1Q9HBX9 757 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 NXF1Q9UBU9 619 aaKnown RBP13.13□□□□□ -0.31
TRA2B-213ENST00000485530 L1RE1Q9UN81 338 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 SNX9Q9Y5X1 595 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 IRAK3Q9Y616 596 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 DCHS1Q96JQ0 3298 aa13.13□□□□□ -0.31
TRA2B-213ENST00000485530 SMTNL1A8MU46 457 aa13.12□□□□□ -0.31
TRA2B-213ENST00000485530 SYN3O14994 580 aa13.12□□□□□ -0.31
TRA2B-213ENST00000485530 STX10O60499 249 aa13.12□□□□□ -0.31
TRA2B-213ENST00000485530 SLC9A1P19634 815 aa13.12□□□□□ -0.31
TRA2B-213ENST00000485530 LMO2P25791 158 aa13.12□□□□□ -0.31
TRA2B-213ENST00000485530 ATICP31939 592 aa13.12□□□□□ -0.31
TRA2B-213ENST00000485530 PNPLA4P41247 253 aa13.12□□□□□ -0.31
TRA2B-213ENST00000485530 PIK3CAP42336 1068 aa13.12□□□□□ -0.31
TRA2B-213ENST00000485530 GLUD2P49448 558 aa13.12□□□□□ -0.31
TRA2B-213ENST00000485530 NDUFV1P49821 464 aa13.12□□□□□ -0.31
TRA2B-213ENST00000485530 COPB1P53618 953 aaKnown RBP13.12□□□□□ -0.31
TRA2B-213ENST00000485530 RBM10P98175 930 aaKnown RBP13.12□□□□□ -0.31
TRA2B-213ENST00000485530 ELAVL2Q12926 359 aaKnown RBP13.12□□□□□ -0.31
TRA2B-213ENST00000485530 MYO1EQ12965 1108 aa13.12□□□□□ -0.31
TRA2B-213ENST00000485530 ADAM15Q13444 863 aa13.12□□□□□ -0.31
TRA2B-213ENST00000485530 MAN2A1Q16706 1144 aa13.12□□□□□ -0.31
TRA2B-213ENST00000485530 SV2CQ496J9 727 aa13.12□□□□□ -0.31
TRA2B-213ENST00000485530 VARS2Q5ST30 1063 aaKnown RBP13.12□□□□□ -0.31
TRA2B-213ENST00000485530 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.12□□□□□ -0.31
TRA2B-213ENST00000485530 FAM114A1Q8IWE2 563 aa13.12□□□□□ -0.31
TRA2B-213ENST00000485530 SMRP1Q8NCR6 262 aa13.12□□□□□ -0.31
TRA2B-213ENST00000485530 FAM200AQ8TCP9 573 aa13.12□□□□□ -0.31
TRA2B-213ENST00000485530 KBTBD7Q8WVZ9 684 aa13.12□□□□□ -0.31
TRA2B-213ENST00000485530 PIK3R5Q8WYR1 880 aa13.12□□□□□ -0.31
TRA2B-213ENST00000485530 ASIC4Q96FT7 647 aa13.12□□□□□ -0.31
TRA2B-213ENST00000485530 NAP1L5Q96NT1 182 aaPredicted RBP13.12□□□□□ -0.31
TRA2B-213ENST00000485530 KLHL5Q96PQ7 755 aa13.12□□□□□ -0.31
TRA2B-213ENST00000485530 TMEM209Q96SK2 561 aa13.12□□□□□ -0.31
TRA2B-213ENST00000485530 MRPL45Q9BRJ2 306 aaKnown RBP13.12□□□□□ -0.31
TRA2B-213ENST00000485530 CRACR2AQ9BSW2 395 aa13.12□□□□□ -0.31
TRA2B-213ENST00000485530 IGFLR1Q9H665 355 aa13.12□□□□□ -0.31
TRA2B-213ENST00000485530 MAGEC2Q9UBF1 373 aaPredicted RBP13.12□□□□□ -0.31
TRA2B-213ENST00000485530 GABRDO14764 452 aa13.11□□□□□ -0.31
TRA2B-213ENST00000485530 TEX28O15482 410 aa13.11□□□□□ -0.31
TRA2B-213ENST00000485530 CAVIN2O95810 425 aa13.11□□□□□ -0.31
TRA2B-213ENST00000485530 WEE2P0C1S8 567 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms