RNA–Protein interactions for RNA: ENST00000484990.1

COL13A1-209, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 360 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-209ENST00000484990 GCNAQ96QF7 691 aa12.52□□□□□ -0.41
COL13A1-209ENST00000484990 TMEM209Q96SK2 561 aa12.52□□□□□ -0.41
COL13A1-209ENST00000484990 RPF1Q9H9Y2 349 aaKnown RBP12.52□□□□□ -0.41
COL13A1-209ENST00000484990 KCND2Q9NZV8 630 aa12.52□□□□□ -0.41
COL13A1-209ENST00000484990 LARSQ9P2J5 1176 aaKnown RBP12.52□□□□□ -0.41
COL13A1-209ENST00000484990 SLC8A2Q9UPR5 921 aa12.52□□□□□ -0.41
COL13A1-209ENST00000484990 NCANO14594 1321 aa12.52□□□□□ -0.41
COL13A1-209ENST00000484990 GREB1Q4ZG55 1949 aa12.51□□□□□ -0.41
COL13A1-209ENST00000484990 ATG2BQ96BY7 2078 aa12.51□□□□□ -0.41
COL13A1-209ENST00000484990 LACTBL1A8MY62 500 aa12.51□□□□□ -0.41
COL13A1-209ENST00000484990 RPP40O75818 363 aaKnown RBP12.51□□□□□ -0.41
COL13A1-209ENST00000484990 VNN2O95498 520 aa12.51□□□□□ -0.41
COL13A1-209ENST00000484990 CCDC192P0DO97 292 aa12.51□□□□□ -0.41
COL13A1-209ENST00000484990 MAPTP10636 758 aaKnown RBP12.51□□□□□ -0.41
COL13A1-209ENST00000484990 ODC1P11926 461 aa12.51□□□□□ -0.41
COL13A1-209ENST00000484990 SCP2P22307 547 aa12.51□□□□□ -0.41
COL13A1-209ENST00000484990 CDC25AP30304 524 aa12.51□□□□□ -0.41
COL13A1-209ENST00000484990 LILRA4P59901 499 aa12.51□□□□□ -0.41
COL13A1-209ENST00000484990 RAD51AP2Q09MP3 1159 aa12.51□□□□□ -0.41
COL13A1-209ENST00000484990 GRSF1Q12849 480 aaKnown RBP eCLIP12.51□□□□□ -0.41
COL13A1-209ENST00000484990 ZRSR1Q15695 479 aaKnown RBP12.51□□□□□ -0.41
COL13A1-209ENST00000484990 CCDC83Q8IWF9 413 aa12.51□□□□□ -0.41
COL13A1-209ENST00000484990 CAMKK1Q8N5S9 505 aa12.51□□□□□ -0.41
COL13A1-209ENST00000484990 SYT2Q8N9I0 419 aaPredicted RBP12.51□□□□□ -0.41
COL13A1-209ENST00000484990 GAB3Q8WWW8 586 aa12.51□□□□□ -0.41
COL13A1-209ENST00000484990 EXOC4Q96A65 974 aa12.51□□□□□ -0.41
COL13A1-209ENST00000484990 SENP8Q96LD8 212 aa12.51□□□□□ -0.41
COL13A1-209ENST00000484990 ZSCAN31Q96LW9 406 aaPredicted RBP12.51□□□□□ -0.41
COL13A1-209ENST00000484990 LRRC3BQ96PB8 259 aa12.51□□□□□ -0.41
COL13A1-209ENST00000484990 CRISPLD1Q9H336 500 aa12.51□□□□□ -0.41
COL13A1-209ENST00000484990 U2AF2P26368 475 aaKnown RBP eCLIP12.5□□□□□ -0.41
COL13A1-209ENST00000484990 RAP1GAPP47736 663 aa12.5□□□□□ -0.41
COL13A1-209ENST00000484990 MCM2P49736 904 aa12.5□□□□□ -0.41
COL13A1-209ENST00000484990 LIG4P49917 911 aa12.5□□□□□ -0.41
COL13A1-209ENST00000484990 SMARCB1Q12824 385 aa12.5□□□□□ -0.41
COL13A1-209ENST00000484990 NBR1Q14596 966 aa12.5□□□□□ -0.41
COL13A1-209ENST00000484990 MGAT5BQ3V5L5 792 aa12.5□□□□□ -0.41
COL13A1-209ENST00000484990 WDR44Q5JSH3 913 aa12.5□□□□□ -0.41
COL13A1-209ENST00000484990 N4BP2L1Q5TBK1 243 aaPredicted RBP12.5□□□□□ -0.41
COL13A1-209ENST00000484990 METTL23Q86XA0 190 aa12.5□□□□□ -0.41
COL13A1-209ENST00000484990 THEM5Q8N1Q8 247 aa12.5□□□□□ -0.41
COL13A1-209ENST00000484990 C2orf15Q8WU43 125 aaKnown RBP12.5□□□□□ -0.41
COL13A1-209ENST00000484990 CDK5RAP3Q96JB5 506 aa12.5□□□□□ -0.41
COL13A1-209ENST00000484990 MKNK1Q9BUB5 465 aa12.5□□□□□ -0.41
COL13A1-209ENST00000484990 GKN1Q9NS71 199 aa12.5□□□□□ -0.41
COL13A1-209ENST00000484990 C2orf42Q9NWW7 574 aa12.5□□□□□ -0.41
COL13A1-209ENST00000484990 DSEQ9UL01 958 aa12.5□□□□□ -0.41
COL13A1-209ENST00000484990 PCDHB6Q9Y5E3 794 aa12.5□□□□□ -0.41
COL13A1-209ENST00000484990 PCDHGA5Q9Y5G8 931 aa12.5□□□□□ -0.41
COL13A1-209ENST00000484990 CACNA1GO43497 2377 aa12.49□□□□□ -0.41
COL13A1-209ENST00000484990 ZNF638Q14966 1978 aaKnown RBP12.49□□□□□ -0.41
COL13A1-209ENST00000484990 NUP210Q8TEM1 1887 aaPredicted RBP12.49□□□□□ -0.41
COL13A1-209ENST00000484990 PP2D1A8MPX8 630 aa12.49□□□□□ -0.41
COL13A1-209ENST00000484990 TRDMT1O14717 391 aaKnown RBP12.49□□□□□ -0.41
COL13A1-209ENST00000484990 TM4SF5O14894 197 aa12.49□□□□□ -0.41
COL13A1-209ENST00000484990 OGTO15294 1046 aa12.49□□□□□ -0.41
COL13A1-209ENST00000484990 EXTL3O43909 919 aa12.49□□□□□ -0.41
COL13A1-209ENST00000484990 AKAP3O75969 853 aa12.49□□□□□ -0.41
COL13A1-209ENST00000484990 EPN2O95208 641 aa12.49□□□□□ -0.41
COL13A1-209ENST00000484990 ADRB2P07550 413 aa12.49□□□□□ -0.41
COL13A1-209ENST00000484990 AVPR1AP37288 418 aa12.49□□□□□ -0.41
COL13A1-209ENST00000484990 TNFSF9P41273 254 aa12.49□□□□□ -0.41
COL13A1-209ENST00000484990 TOB1P50616 345 aaPredicted RBP12.49□□□□□ -0.41
COL13A1-209ENST00000484990 CACNB1Q02641 598 aaPredicted RBP12.49□□□□□ -0.41
COL13A1-209ENST00000484990 TNK2Q07912 1038 aa12.49□□□□□ -0.41
COL13A1-209ENST00000484990 ST3GAL1Q11201 340 aa12.49□□□□□ -0.41
COL13A1-209ENST00000484990 RUNX3Q13761 415 aa12.49□□□□□ -0.41
COL13A1-209ENST00000484990 SF3A2Q15428 464 aaKnown RBP12.49□□□□□ -0.41
COL13A1-209ENST00000484990 SLC39A12Q504Y0 691 aa12.49□□□□□ -0.41
COL13A1-209ENST00000484990 STPG1Q5TH74 334 aa12.49□□□□□ -0.41
COL13A1-209ENST00000484990 SPATA1Q5VX52 437 aa12.49□□□□□ -0.41
COL13A1-209ENST00000484990 CC2D1AQ6P1N0 951 aaPredicted RBP12.49□□□□□ -0.41
COL13A1-209ENST00000484990 KCNK18Q7Z418 384 aa12.49□□□□□ -0.41
COL13A1-209ENST00000484990 CMTM8Q8IZV2 173 aa12.49□□□□□ -0.41
COL13A1-209ENST00000484990 FAM212AQ96EL1 285 aa12.49□□□□□ -0.41
COL13A1-209ENST00000484990 ZC3H10Q96K80 434 aaKnown RBP12.49□□□□□ -0.41
COL13A1-209ENST00000484990 SEPT5Q99719 369 aaPredicted RBP12.49□□□□□ -0.41
COL13A1-209ENST00000484990 MMTAG2Q9BU76 263 aaKnown RBP12.49□□□□□ -0.41
COL13A1-209ENST00000484990 SLC46A2Q9BY10 475 aa12.49□□□□□ -0.41
COL13A1-209ENST00000484990 KIF26AQ9ULI4 1882 aaPredicted RBP12.48□□□□□ -0.41
COL13A1-209ENST00000484990 SOBPA7XYQ1 873 aa12.48□□□□□ -0.41
COL13A1-209ENST00000484990 HNRNPDLO14979 420 aaKnown RBP12.48□□□□□ -0.41
COL13A1-209ENST00000484990 SOAT2O75908 522 aa12.48□□□□□ -0.41
COL13A1-209ENST00000484990 CYP11A1P05108 521 aa12.48□□□□□ -0.41
COL13A1-209ENST00000484990 DDX6P26196 483 aaKnown RBP eCLIP12.48□□□□□ -0.41
COL13A1-209ENST00000484990 PMLP29590 882 aa12.48□□□□□ -0.41
COL13A1-209ENST00000484990 ABCD1P33897 745 aa12.48□□□□□ -0.41
COL13A1-209ENST00000484990 NCKAP1LP55160 1127 aa12.48□□□□□ -0.41
COL13A1-209ENST00000484990 SHC2P98077 582 aa12.48□□□□□ -0.41
COL13A1-209ENST00000484990 CYP4F8P98187 520 aa12.48□□□□□ -0.41
COL13A1-209ENST00000484990 BFSP1Q12934 665 aa12.48□□□□□ -0.41
COL13A1-209ENST00000484990 FBXO43Q4G163 708 aa12.48□□□□□ -0.41
COL13A1-209ENST00000484990 TMEM196Q5HYL7 178 aa12.48□□□□□ -0.41
COL13A1-209ENST00000484990 HYIQ5T013 277 aa12.48□□□□□ -0.41
COL13A1-209ENST00000484990 KBTBD6Q86V97 674 aa12.48□□□□□ -0.41
COL13A1-209ENST00000484990 DCP1BQ8IZD4 617 aaKnown RBP12.48□□□□□ -0.41
COL13A1-209ENST00000484990 SPPL2BQ8TCT7 592 aa12.48□□□□□ -0.41
COL13A1-209ENST00000484990 KCNN1Q92952 543 aa12.48□□□□□ -0.41
COL13A1-209ENST00000484990 LPIN3Q9BQK8 851 aa12.48□□□□□ -0.41
COL13A1-209ENST00000484990 FAM83CQ9BQN1 747 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms