RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 REV3LO60673 3130 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 VWA3AA6NCI4 1184 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 MEIS3P2A8K0S8 358 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 TMEM189-UBE2V1I3L0A0 370 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 PIK3R2O00459 728 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 GNB5O14775 395 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 LILRB5O75023 590 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 HIP1RO75146 1068 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 TNFRSF21O75509 655 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 TOM1L1O75674 476 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 SSBP05455 408 aaKnown RBP eCLIP6.74□□□□□ -1.33
PTCD3-215ENST00000484203 CNPP09543 421 aaKnown RBP6.74□□□□□ -1.33
PTCD3-215ENST00000484203 CES1P23141 567 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 AKAP5P24588 427 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 RPL9P32969 192 aaKnown RBP6.74□□□□□ -1.33
PTCD3-215ENST00000484203 NPTX2P47972 431 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 CLCN4P51793 760 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 PEX3P56589 373 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 CUL4AQ13619 759 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 KIAA0319Q5VV43 1072 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 RINT1Q6NUQ1 792 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 FUT10Q6P4F1 479 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 DCLRE1AQ6PJP8 1040 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 ZPBP2Q6X784 338 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 LINC00114Q6XXX2 140 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 C20orf204Q6ZNR8 217 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 CCDC149Q6ZUS6 474 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 C1orf186Q6ZWK4 172 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 GPR149Q86SP6 731 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 TMEM173Q86WV6 379 aaPredicted RBP6.74□□□□□ -1.33
PTCD3-215ENST00000484203 SUGP1Q8IWZ8 645 aaKnown RBP6.74□□□□□ -1.33
PTCD3-215ENST00000484203 RNF168Q8IYW5 571 aaPredicted RBP6.74□□□□□ -1.33
PTCD3-215ENST00000484203 ZDHHC14Q8IZN3 488 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 SYT2Q8N9I0 419 aaPredicted RBP6.74□□□□□ -1.33
PTCD3-215ENST00000484203 TDRD5Q8NAT2 981 aaKnown RBP6.74□□□□□ -1.33
PTCD3-215ENST00000484203 SLC22A17Q8WUG5 538 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 PMEPA1Q969W9 287 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 NXPE3Q969Y0 559 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 FAM122AQ96E09 287 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 KLHL5Q96PQ7 755 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 CITED4Q96RK1 184 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 LPIN3Q9BQK8 851 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 TTPALQ9BTX7 342 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 APOL6Q9BWW8 343 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 SMG9Q9H0W8 520 aaKnown RBP6.74□□□□□ -1.33
PTCD3-215ENST00000484203 ZSCAN16Q9H4T2 348 aaPredicted RBP6.74□□□□□ -1.33
PTCD3-215ENST00000484203 PLEKHA5Q9HAU0 1116 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.74□□□□□ -1.33
PTCD3-215ENST00000484203 ARHGAP28Q9P2N2 729 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 CCDC39Q9UFE4 941 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 FOXD3Q9UJU5 478 aaPredicted RBP6.74□□□□□ -1.33
PTCD3-215ENST00000484203 MAFFQ9ULX9 164 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 HES2Q9Y543 173 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 ZFP37Q9Y6Q3 630 aaPredicted RBP6.74□□□□□ -1.33
PTCD3-215ENST00000484203 MORC2Q9Y6X9 1032 aaPredicted RBP6.74□□□□□ -1.33
PTCD3-215ENST00000484203 MUC6Q6W4X9 2439 aa6.74□□□□□ -1.33
PTCD3-215ENST00000484203 SIP14410 1827 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 ARHGEF37A1IGU5 675 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 E9PMD0 336 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 TEX28O15482 410 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 CLDN3O15551 220 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 XPOTO43592 962 aaKnown RBP6.73□□□□□ -1.33
PTCD3-215ENST00000484203 PHACTR2O75167 634 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 TBCAO75347 108 aaKnown RBP6.73□□□□□ -1.33
PTCD3-215ENST00000484203 RECQL4O94761 1208 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 B3GAT3O94766 335 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 PAPLNO95428 1278 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 EFEMP2O95967 443 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 POU2F2P09086 479 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 CLTAP09496 248 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 HNRNPA1P09651 372 aaKnown RBP eCLIP6.73□□□□□ -1.33
PTCD3-215ENST00000484203 PLA2G4BP0C869 781 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 LIG1P18858 919 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 MAPK1P28482 360 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 HOXA9P31269 272 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 AFF1P51825 1210 aaKnown RBP6.73□□□□□ -1.33
PTCD3-215ENST00000484203 ZXDAP98168 799 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 POU5F1Q01860 360 aaKnown RBP6.73□□□□□ -1.33
PTCD3-215ENST00000484203 SIGLEC14Q08ET2 396 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 ZRSR1Q15695 479 aaKnown RBP6.73□□□□□ -1.33
PTCD3-215ENST00000484203 PTPN21Q16825 1174 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 UVSSAQ2YD98 709 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 ZNF568Q3ZCX4 644 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 RARS2Q5T160 578 aaKnown RBP6.73□□□□□ -1.33
PTCD3-215ENST00000484203 LIN9Q5TKA1 542 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 MPZL3Q6UWV2 235 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.73□□□□□ -1.33
PTCD3-215ENST00000484203 ANKS3Q6ZW76 656 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 CD302Q8IX05 232 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 GSTCDQ8NEC7 633 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 BCL7CQ8WUZ0 217 aaPredicted RBP6.73□□□□□ -1.33
PTCD3-215ENST00000484203 BSNDQ8WZ55 320 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 ACAP3Q96P50 834 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 ACO2Q99798 780 aaKnown RBP6.73□□□□□ -1.33
PTCD3-215ENST00000484203 MMTAG2Q9BU76 263 aaKnown RBP6.73□□□□□ -1.33
PTCD3-215ENST00000484203 CCSER1Q9C0I3 900 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 LRRC27Q9C0I9 530 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 PARVGQ9HBI0 331 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 MARCH5Q9NX47 278 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 SNTG2Q9NY99 539 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms