RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 LMAN2LQ9H0V9 348 aa9.74□□□□□ -0.85
COL8A1-207ENST00000483969 MRPL44Q9H9J2 332 aaKnown RBP9.74□□□□□ -0.85
COL8A1-207ENST00000483969 EXOC7Q9UPT5 735 aa9.74□□□□□ -0.85
COL8A1-207ENST00000483969 INPP5FQ9Y2H2 1132 aa9.74□□□□□ -0.85
COL8A1-207ENST00000483969 PVALEFA0A1B0GWK0 134 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 PAX4O43316 350 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 MYL1P05976 194 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 AKAP5P24588 427 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 NMT1P30419 496 aaKnown RBP9.73□□□□□ -0.85
COL8A1-207ENST00000483969 PPM1AP35813 382 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 AFMP43652 599 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 LIG4P49917 911 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 YARSP54577 528 aaKnown RBP9.73□□□□□ -0.85
COL8A1-207ENST00000483969 ASIC1P78348 528 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 UBE3AQ05086 875 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 KYAT1Q16773 422 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 EEF1DP3Q658K8 133 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 SLFN12LQ6IEE8 588 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 KCNT2Q6UVM3 1135 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 MPZL3Q6UWV2 235 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 LRRC55Q6ZSA7 311 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 SFR1Q86XK3 245 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 THNSL1Q8IYQ7 743 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 FSIP1Q8NA03 581 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 MRPS27Q92552 414 aaKnown RBP9.73□□□□□ -0.85
COL8A1-207ENST00000483969 ACCSQ96QU6 501 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 GAD1Q99259 594 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 CCDC94Q9BW85 323 aaPredicted RBP9.73□□□□□ -0.85
COL8A1-207ENST00000483969 TRIM9Q9C026 710 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 CWH43Q9H720 699 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 PTPRHQ9HD43 1115 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 OLFML3Q9NRN5 406 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 TBC1D13Q9NVG8 400 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 SNTG2Q9NY99 539 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 SPG21Q9NZD8 308 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 PLAGL2Q9UPG8 496 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 HPSEQ9Y251 543 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 HIF3AQ9Y2N7 669 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 HES2Q9Y543 173 aa9.73□□□□□ -0.85
COL8A1-207ENST00000483969 TANC1Q9C0D5 1861 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 FRMD3A2A2Y4 597 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 ARL5CA6NH57 179 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 EPOPA6NHQ4 379 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 MEIS3P2A8K0S8 358 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 INPPL1O15357 1258 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 SART1O43290 800 aaKnown RBP9.72□□□□□ -0.85
COL8A1-207ENST00000483969 GCNT3O95395 438 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 POMCP01189 267 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 PIGRP01833 764 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 LINC00271P0C7V0 271 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 PROZP22891 400 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 IRAK1P51617 712 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 NDUFA8P51970 172 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 BCAR1P56945 870 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 PLCB3Q01970 1234 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 BMS1Q14692 1282 aaKnown RBP9.72□□□□□ -0.85
COL8A1-207ENST00000483969 POSTNQ15063 836 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 ZNF568Q3ZCX4 644 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 XKR5Q6UX68 686 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 UNC13DQ70J99 1090 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 SPRED2Q7Z698 418 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 TRIM42Q8IWZ5 723 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 FAM20CQ8IXL6 584 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 COLGALT1Q8NBJ5 622 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 SPPL3Q8TCT6 385 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 CCDC47Q96A33 483 aaKnown RBP9.72□□□□□ -0.85
COL8A1-207ENST00000483969 MRPL38Q96DV4 380 aaKnown RBP9.72□□□□□ -0.85
COL8A1-207ENST00000483969 KLHDC7BQ96G42 594 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 PAGE5Q96GU1 130 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 ACAP3Q96P50 834 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 RPS6KC1Q96S38 1066 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 FIZ1Q96SL8 496 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 TMEM175Q9BSA9 504 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 GBP3Q9H0R5 595 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 CDT1Q9H211 546 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 NXF3Q9H4D5 531 aaKnown RBP9.72□□□□□ -0.85
COL8A1-207ENST00000483969 NRDE2Q9H7Z3 1164 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 TMEM206Q9H813 350 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 GOLGA2P5Q9HBQ8 144 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 TOPORSQ9NS56 1045 aaPredicted RBP9.72□□□□□ -0.85
COL8A1-207ENST00000483969 STK39Q9UEW8 545 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 SALL4Q9UJQ4 1053 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 FAN1Q9Y2M0 1017 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 GDAQ9Y2T3 454 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 MTCH2Q9Y6C9 303 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 ZMYM2Q9UBW7 1377 aa9.72□□□□□ -0.85
COL8A1-207ENST00000483969 HNRNPDLO14979 420 aaKnown RBP9.71□□□□□ -0.86
COL8A1-207ENST00000483969 LPXNO60711 386 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 FGF18O76093 207 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 DDHD2O94830 711 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 ZNF202O95125 648 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 MED26O95402 600 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 EDN1P05305 212 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 THP07101 528 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 GALTP07902 379 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 SPINK2P20155 84 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 CES1P23141 567 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 MLH1P40692 756 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 SCNN1GP51170 649 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 MCL1Q07820 350 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms