RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 TMEM161BQ8NDZ6 487 aa8.03□□□□□ -1.12
CSDE1-206ENST00000483030 FBXO18Q8NFZ0 1043 aa8.03□□□□□ -1.12
CSDE1-206ENST00000483030 SPIRE2Q8WWL2 714 aa8.03□□□□□ -1.12
CSDE1-206ENST00000483030 KIF12Q96FN5 646 aa8.03□□□□□ -1.12
CSDE1-206ENST00000483030 TMEM209Q96SK2 561 aa8.03□□□□□ -1.12
CSDE1-206ENST00000483030 OXCT2Q9BYC2 517 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-206ENST00000483030 RAB34Q9BZG1 259 aa8.03□□□□□ -1.12
CSDE1-206ENST00000483030 HAPLN2Q9GZV7 340 aa8.03□□□□□ -1.12
CSDE1-206ENST00000483030 C17orf75Q9HAS0 396 aa8.03□□□□□ -1.12
CSDE1-206ENST00000483030 GKN1Q9NS71 199 aa8.03□□□□□ -1.12
CSDE1-206ENST00000483030 RXFP3Q9NSD7 469 aa8.03□□□□□ -1.12
CSDE1-206ENST00000483030 ANGPTL2Q9UKU9 493 aa8.03□□□□□ -1.12
CSDE1-206ENST00000483030 UBQLN1Q9UMX0 589 aaKnown RBP8.03□□□□□ -1.12
CSDE1-206ENST00000483030 NOL7Q9UMY1 257 aaKnown RBP8.03□□□□□ -1.12
CSDE1-206ENST00000483030 ASB3Q9Y575 518 aa8.03□□□□□ -1.12
CSDE1-206ENST00000483030 MTMR11A4FU01 709 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 PPEF2O14830 753 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 RPP40O75818 363 aaKnown RBP8.02□□□□□ -1.13
CSDE1-206ENST00000483030 PRAMEF12O95522 483 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 FGF19O95750 216 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 CLTAP09496 248 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 ZNF806P0C7X5 589 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 MAPTP10636 758 aaKnown RBP8.02□□□□□ -1.13
CSDE1-206ENST00000483030 PLS3P13797 630 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 TYMPP19971 482 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 CYP3A5P20815 502 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 GUCY2CP25092 1073 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 TNFSF9P41273 254 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 TOB1P50616 345 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-206ENST00000483030 LIMK1P53667 647 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 SMTNP53814 917 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 LILRA4P59901 499 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 MYBPC2Q14324 1141 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 E2F4Q16254 413 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 ITPRIPL2Q3MIP1 535 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 ARHGAP15Q53QZ3 475 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 ARMCX5Q6P1M9 558 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 PKN3Q6P5Z2 889 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 CACNA2D4Q7Z3S7 1137 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 ITIH5Q86UX2 942 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 KBTBD6Q86V97 674 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 C12orf50Q8NA57 414 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-206ENST00000483030 BPIFB1Q8TDL5 484 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 GAB3Q8WWW8 586 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 PSMG2Q969U7 264 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 BICD1Q96G01 975 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 LOXL4Q96JB6 756 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 SENP8Q96LD8 212 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 PLIN2Q99541 437 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 LPIN3Q9BQK8 851 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 MMTAG2Q9BU76 263 aaKnown RBP8.02□□□□□ -1.13
CSDE1-206ENST00000483030 TIPINQ9BVW5 301 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 SLC46A2Q9BY10 475 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 SMG9Q9H0W8 520 aaKnown RBP8.02□□□□□ -1.13
CSDE1-206ENST00000483030 TASP1Q9H6P5 420 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 POLR3BQ9NW08 1133 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-206ENST00000483030 THG1LQ9NWX6 298 aaKnown RBP8.02□□□□□ -1.13
CSDE1-206ENST00000483030 OBP2AQ9NY56 170 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 KCNG1Q9UIX4 513 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 LIMCH1Q9UPQ0 1083 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 PCDHB6Q9Y5E3 794 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 CHD8Q9HCK8 2581 aa8.02□□□□□ -1.13
CSDE1-206ENST00000483030 NPHP3-ACAD11A0A0J9YXS1 232 aa8.01□□□□□ -1.13
CSDE1-206ENST00000483030 XPOTO43592 962 aaKnown RBP8.01□□□□□ -1.13
CSDE1-206ENST00000483030 CCDC192P0DO97 292 aa8.01□□□□□ -1.13
CSDE1-206ENST00000483030 CDK11BP21127 795 aaKnown RBP8.01□□□□□ -1.13
CSDE1-206ENST00000483030 PMLP29590 882 aa8.01□□□□□ -1.13
CSDE1-206ENST00000483030 RAP1GAPP47736 663 aa8.01□□□□□ -1.13
CSDE1-206ENST00000483030 TUFMP49411 452 aaKnown RBP8.01□□□□□ -1.13
CSDE1-206ENST00000483030 CYP4F8P98187 520 aa8.01□□□□□ -1.13
CSDE1-206ENST00000483030 PPP2R3AQ06190 1150 aa8.01□□□□□ -1.13
CSDE1-206ENST00000483030 GRSF1Q12849 480 aaKnown RBP eCLIP8.01□□□□□ -1.13
CSDE1-206ENST00000483030 PTPAQ15257 358 aa8.01□□□□□ -1.13
CSDE1-206ENST00000483030 ENOX2Q16206 610 aaKnown RBP8.01□□□□□ -1.13
CSDE1-206ENST00000483030 TAF12Q16514 161 aa8.01□□□□□ -1.13
CSDE1-206ENST00000483030 MGAT5BQ3V5L5 792 aa8.01□□□□□ -1.13
CSDE1-206ENST00000483030 SLC39A12Q504Y0 691 aa8.01□□□□□ -1.13
CSDE1-206ENST00000483030 STPG1Q5TH74 334 aa8.01□□□□□ -1.13
CSDE1-206ENST00000483030 FSTL4Q6MZW2 842 aa8.01□□□□□ -1.13
CSDE1-206ENST00000483030 DTHD1Q6ZMT9 781 aa8.01□□□□□ -1.13
CSDE1-206ENST00000483030 SYT2Q8N9I0 419 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-206ENST00000483030 FAM184AQ8NB25 1140 aa8.01□□□□□ -1.13
CSDE1-206ENST00000483030 OR10T2Q8NGX3 314 aa8.01□□□□□ -1.13
CSDE1-206ENST00000483030 GIPC2Q8TF65 315 aa8.01□□□□□ -1.13
CSDE1-206ENST00000483030 SEPT5Q99719 369 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-206ENST00000483030 LLPHQ9BRT6 129 aaKnown RBP8.01□□□□□ -1.13
CSDE1-206ENST00000483030 SMOC1Q9H4F8 434 aa8.01□□□□□ -1.13
CSDE1-206ENST00000483030 RPF1Q9H9Y2 349 aaKnown RBP8.01□□□□□ -1.13
CSDE1-206ENST00000483030 IL21Q9HBE4 155 aa8.01□□□□□ -1.13
CSDE1-206ENST00000483030 RALYQ9UKM9 306 aaKnown RBP8.01□□□□□ -1.13
CSDE1-206ENST00000483030 SLC8A2Q9UPR5 921 aa8.01□□□□□ -1.13
CSDE1-206ENST00000483030 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-206ENST00000483030 MAP1BP46821 2468 aaKnown RBP8.01□□□□□ -1.13
CSDE1-206ENST00000483030 OTOL1A6NHN0 477 aaPredicted RBP8□□□□□ -1.13
CSDE1-206ENST00000483030 OGTO15294 1046 aa8□□□□□ -1.13
CSDE1-206ENST00000483030 ATG13O75143 517 aa8□□□□□ -1.13
CSDE1-206ENST00000483030 EPN2O95208 641 aa8□□□□□ -1.13
CSDE1-206ENST00000483030 ODC1P11926 461 aa8□□□□□ -1.13
CSDE1-206ENST00000483030 ATF6P18850 670 aa8□□□□□ -1.13
CSDE1-206ENST00000483030 U2AF2P26368 475 aaKnown RBP eCLIP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms