RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, human

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM54-206	ENST00000482771	TTC9B	Q8N6N2	239 aa		13.93	□□□□□ -0.18
TMEM54-206	ENST00000482771	BPIFB1	Q8TDL5	484 aa		13.93	□□□□□ -0.18
TMEM54-206	ENST00000482771	TASP1	Q9H6P5	420 aa		13.93	□□□□□ -0.18
TMEM54-206	ENST00000482771	GKN1	Q9NS71	199 aa		13.93	□□□□□ -0.18
TMEM54-206	ENST00000482771	THG1L	Q9NWX6	298 aa	Known RBP	13.93	□□□□□ -0.18
TMEM54-206	ENST00000482771	UBQLN1	Q9UMX0	589 aa	Known RBP	13.93	□□□□□ -0.18
TMEM54-206	ENST00000482771	PCDHB6	Q9Y5E3	794 aa		13.93	□□□□□ -0.18
TMEM54-206	ENST00000482771	CIT	O14578	2027 aa		13.93	□□□□□ -0.18
TMEM54-206	ENST00000482771	PPEF2	O14830	753 aa		13.92	□□□□□ -0.18
TMEM54-206	ENST00000482771	RPP40	O75818	363 aa	Known RBP	13.92	□□□□□ -0.18
TMEM54-206	ENST00000482771	TYMP	P19971	482 aa		13.92	□□□□□ -0.18
TMEM54-206	ENST00000482771	GUCY2C	P25092	1073 aa		13.92	□□□□□ -0.18
TMEM54-206	ENST00000482771	TNFSF9	P41273	254 aa		13.92	□□□□□ -0.18
TMEM54-206	ENST00000482771	LIMK1	P53667	647 aa		13.92	□□□□□ -0.18
TMEM54-206	ENST00000482771	LILRA4	P59901	499 aa		13.92	□□□□□ -0.18
TMEM54-206	ENST00000482771	ERICH6B	Q5W0A0	696 aa		13.92	□□□□□ -0.18
TMEM54-206	ENST00000482771	PKN3	Q6P5Z2	889 aa		13.92	□□□□□ -0.18
TMEM54-206	ENST00000482771	DTHD1	Q6ZMT9	781 aa		13.92	□□□□□ -0.18
TMEM54-206	ENST00000482771	GAB3	Q8WWW8	586 aa		13.92	□□□□□ -0.18
TMEM54-206	ENST00000482771	BICD1	Q96G01	975 aa		13.92	□□□□□ -0.18
TMEM54-206	ENST00000482771	LOXL4	Q96JB6	756 aa		13.92	□□□□□ -0.18
TMEM54-206	ENST00000482771	SENP8	Q96LD8	212 aa		13.92	□□□□□ -0.18
TMEM54-206	ENST00000482771	PLIN2	Q99541	437 aa		13.92	□□□□□ -0.18
TMEM54-206	ENST00000482771	LPIN3	Q9BQK8	851 aa		13.92	□□□□□ -0.18
TMEM54-206	ENST00000482771	MMTAG2	Q9BU76	263 aa	Known RBP	13.92	□□□□□ -0.18
TMEM54-206	ENST00000482771	TIPIN	Q9BVW5	301 aa		13.92	□□□□□ -0.18
TMEM54-206	ENST00000482771	SLC46A2	Q9BY10	475 aa		13.92	□□□□□ -0.18
TMEM54-206	ENST00000482771	SMG9	Q9H0W8	520 aa	Known RBP	13.92	□□□□□ -0.18
TMEM54-206	ENST00000482771	LIMCH1	Q9UPQ0	1083 aa		13.92	□□□□□ -0.18
TMEM54-206	ENST00000482771	SLC8A2	Q9UPR5	921 aa		13.92	□□□□□ -0.18
TMEM54-206	ENST00000482771	ATG2B	Q96BY7	2078 aa		13.92	□□□□□ -0.18
TMEM54-206	ENST00000482771	ZFHX4	Q86UP3	3567 aa		13.91	□□□□□ -0.18
TMEM54-206	ENST00000482771	COL4A2	P08572	1712 aa		13.91	□□□□□ -0.18
TMEM54-206	ENST00000482771	PRAMEF12	O95522	483 aa		13.91	□□□□□ -0.18
TMEM54-206	ENST00000482771	CCDC192	P0DO97	292 aa		13.91	□□□□□ -0.18
TMEM54-206	ENST00000482771	PML	P29590	882 aa		13.91	□□□□□ -0.18
TMEM54-206	ENST00000482771	WEE1	P30291	646 aa		13.91	□□□□□ -0.18
TMEM54-206	ENST00000482771	RAP1GAP	P47736	663 aa		13.91	□□□□□ -0.18
TMEM54-206	ENST00000482771	TUFM	P49411	452 aa	Known RBP	13.91	□□□□□ -0.18
TMEM54-206	ENST00000482771	CYP4F8	P98187	520 aa		13.91	□□□□□ -0.18
TMEM54-206	ENST00000482771	PPP2R3A	Q06190	1150 aa		13.91	□□□□□ -0.18
TMEM54-206	ENST00000482771	GRSF1	Q12849	480 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
TMEM54-206	ENST00000482771	PTPA	Q15257	358 aa		13.91	□□□□□ -0.18
TMEM54-206	ENST00000482771	TAF12	Q16514	161 aa		13.91	□□□□□ -0.18
TMEM54-206	ENST00000482771	STPG1	Q5TH74	334 aa		13.91	□□□□□ -0.18
TMEM54-206	ENST00000482771	GIPC2	Q8TF65	315 aa		13.91	□□□□□ -0.18
TMEM54-206	ENST00000482771	FAM212A	Q96EL1	285 aa		13.91	□□□□□ -0.18
TMEM54-206	ENST00000482771	SEPT5	Q99719	369 aa	Predicted RBP	13.91	□□□□□ -0.18
TMEM54-206	ENST00000482771	LLPH	Q9BRT6	129 aa	Known RBP	13.91	□□□□□ -0.18
TMEM54-206	ENST00000482771	SMOC1	Q9H4F8	434 aa		13.91	□□□□□ -0.18
TMEM54-206	ENST00000482771	RPF1	Q9H9Y2	349 aa	Known RBP	13.91	□□□□□ -0.18
TMEM54-206	ENST00000482771	POLR3B	Q9NW08	1133 aa	Predicted RBP	13.91	□□□□□ -0.18
TMEM54-206	ENST00000482771	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.91	□□□□□ -0.18
TMEM54-206	ENST00000482771	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.9	□□□□□ -0.18
TMEM54-206	ENST00000482771	XPOT	O43592	962 aa	Known RBP	13.9	□□□□□ -0.18
TMEM54-206	ENST00000482771	ATG13	O75143	517 aa		13.9	□□□□□ -0.18
TMEM54-206	ENST00000482771	EPN2	O95208	641 aa		13.9	□□□□□ -0.18
TMEM54-206	ENST00000482771	U2AF2	P26368	475 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
TMEM54-206	ENST00000482771	ENOX2	Q16206	610 aa	Known RBP	13.9	□□□□□ -0.18
TMEM54-206	ENST00000482771	MGAT5B	Q3V5L5	792 aa		13.9	□□□□□ -0.18
TMEM54-206	ENST00000482771	SLC39A12	Q504Y0	691 aa		13.9	□□□□□ -0.18
TMEM54-206	ENST00000482771	SPATA1	Q5VX52	437 aa		13.9	□□□□□ -0.18
TMEM54-206	ENST00000482771	FSTL4	Q6MZW2	842 aa		13.9	□□□□□ -0.18
TMEM54-206	ENST00000482771	SYT2	Q8N9I0	419 aa	Predicted RBP	13.9	□□□□□ -0.18
TMEM54-206	ENST00000482771	FAM184A	Q8NB25	1140 aa		13.9	□□□□□ -0.18
TMEM54-206	ENST00000482771	OR10T2	Q8NGX3	314 aa		13.9	□□□□□ -0.18
TMEM54-206	ENST00000482771	IL21	Q9HBE4	155 aa		13.9	□□□□□ -0.18
TMEM54-206	ENST00000482771	HSFX1	Q9UBD0	423 aa		13.9	□□□□□ -0.18
TMEM54-206	ENST00000482771	RALY	Q9UKM9	306 aa	Known RBP	13.9	□□□□□ -0.18
TMEM54-206	ENST00000482771	SPAG17	Q6Q759	2223 aa		13.9	□□□□□ -0.18
TMEM54-206	ENST00000482771	ATRX	P46100	2492 aa		13.89	□□□□□ -0.19
TMEM54-206	ENST00000482771	CCDC163	A0A0D9SF12	145 aa		13.89	□□□□□ -0.19
TMEM54-206	ENST00000482771	OTOL1	A6NHN0	477 aa	Predicted RBP	13.89	□□□□□ -0.19
TMEM54-206	ENST00000482771	KCNK5	O95279	499 aa		13.89	□□□□□ -0.19
TMEM54-206	ENST00000482771	ADRB2	P07550	413 aa		13.89	□□□□□ -0.19
TMEM54-206	ENST00000482771	ODC1	P11926	461 aa		13.89	□□□□□ -0.19
TMEM54-206	ENST00000482771	CDC25C	P30307	473 aa		13.89	□□□□□ -0.19
TMEM54-206	ENST00000482771	MCM2	P49736	904 aa		13.89	□□□□□ -0.19
TMEM54-206	ENST00000482771	LIG4	P49917	911 aa		13.89	□□□□□ -0.19
TMEM54-206	ENST00000482771	GALK1	P51570	392 aa		13.89	□□□□□ -0.19
TMEM54-206	ENST00000482771	SHC2	P98077	582 aa		13.89	□□□□□ -0.19
TMEM54-206	ENST00000482771	RUNX3	Q13761	415 aa		13.89	□□□□□ -0.19
TMEM54-206	ENST00000482771	VEPH1	Q14D04	833 aa		13.89	□□□□□ -0.19
TMEM54-206	ENST00000482771	KYAT1	Q16773	422 aa		13.89	□□□□□ -0.19
TMEM54-206	ENST00000482771	TMEM196	Q5HYL7	178 aa		13.89	□□□□□ -0.19
TMEM54-206	ENST00000482771	C9orf57	Q5W0N0	161 aa		13.89	□□□□□ -0.19
TMEM54-206	ENST00000482771	JADE1	Q6IE81	842 aa		13.89	□□□□□ -0.19
TMEM54-206	ENST00000482771	CMTM8	Q8IZV2	173 aa		13.89	□□□□□ -0.19
TMEM54-206	ENST00000482771	PNMA5	Q96PV4	448 aa		13.89	□□□□□ -0.19
TMEM54-206	ENST00000482771	GCNA	Q96QF7	691 aa		13.89	□□□□□ -0.19
TMEM54-206	ENST00000482771	TSPAN18	Q96SJ8	248 aa		13.89	□□□□□ -0.19
TMEM54-206	ENST00000482771	FAM83C	Q9BQN1	747 aa		13.89	□□□□□ -0.19
TMEM54-206	ENST00000482771	LSM14B	Q9BX40	385 aa	Known RBP	13.89	□□□□□ -0.19
TMEM54-206	ENST00000482771	EBF3	Q9H4W6	596 aa		13.89	□□□□□ -0.19
TMEM54-206	ENST00000482771	FBRSL1	Q9HCM7	1045 aa	Known RBP	13.89	□□□□□ -0.19
TMEM54-206	ENST00000482771	LAD1	O00515	517 aa		13.88	□□□□□ -0.19
TMEM54-206	ENST00000482771	PIR	O00625	290 aa		13.88	□□□□□ -0.19
TMEM54-206	ENST00000482771	TRDMT1	O14717	391 aa	Known RBP	13.88	□□□□□ -0.19
TMEM54-206	ENST00000482771	OGT	O15294	1046 aa		13.88	□□□□□ -0.19
TMEM54-206	ENST00000482771	PLA2G4B	P0C869	781 aa		13.88	□□□□□ -0.19

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