RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 LENG9Q96B70 501 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 TRMT2BQ96GJ1 504 aaKnown RBP8.36□□□□□ -1.07
SNX13-208ENST00000482558 ZBED3Q96IU2 234 aaPredicted RBP8.36□□□□□ -1.07
SNX13-208ENST00000482558 ALS2CR12Q96Q35 445 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 SLF1Q9BQI6 1058 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 TIPINQ9BVW5 301 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 DEF6Q9H4E7 631 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 FBXL5Q9UKA1 691 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 TRHDEQ9UKU6 1024 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 ODF2LQ9ULJ1 636 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 SIK3Q9Y2K2 1263 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 PCDHA2Q9Y5H9 948 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.36□□□□□ -1.07
SNX13-208ENST00000482558 LOXHD1Q8IVV2 1947 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 GTPBP10A4D1E9 387 aaKnown RBP8.35□□□□□ -1.07
SNX13-208ENST00000482558 TCP10L2B9ZVM9 353 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 E9PMD0 336 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 MSH4O15457 936 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 TACC1O75410 805 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 MED24O75448 989 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 SERPING1P05155 500 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 ICAM1P05362 532 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 CCNFP41002 786 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 ARHGAP25P42331 645 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 PRELPP51888 382 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 USP14P54578 494 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 SNRPFP62306 86 aaKnown RBP8.35□□□□□ -1.07
SNX13-208ENST00000482558 ITIH3Q06033 890 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 ADAM9Q13443 819 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 GIT2Q14161 759 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 STAT4Q14765 748 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 KRT72Q14CN4 511 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 EPHA7Q15375 998 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 EZH2Q15910 746 aaKnown RBP8.35□□□□□ -1.07
SNX13-208ENST00000482558 USH1GQ495M9 461 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 CEP55Q53EZ4 464 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 ZNF648Q5T619 568 aaPredicted RBP8.35□□□□□ -1.07
SNX13-208ENST00000482558 PAPD7Q5XG87 772 aaKnown RBP8.35□□□□□ -1.07
SNX13-208ENST00000482558 CIAPIN1Q6FI81 312 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 NCAPH2Q6IBW4 605 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 FBXO38Q6PIJ6 1188 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 WDR59Q6PJI9 974 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 GK5Q6ZS86 529 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 KCNK18Q7Z418 384 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 TRIM59Q8IWR1 403 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 SLC35F6Q8N357 371 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 ACRBPQ8NEB7 543 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 FBXO27Q8NI29 283 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 GPBAR1Q8TDU6 330 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 TMEM174Q8WUU8 243 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 SKA1Q96BD8 255 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 MPP4Q96JB8 637 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 HSD17B14Q9BPX1 270 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 KCTD10Q9H3F6 313 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 CCDC86Q9H6F5 360 aaKnown RBP8.35□□□□□ -1.07
SNX13-208ENST00000482558 MMRN2Q9H8L6 949 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 IFT122Q9HBG6 1241 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 ARFGAP3Q9NP61 516 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 RNF14Q9UBS8 474 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 VAV3Q9UKW4 847 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 SLC5A6Q9Y289 635 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 JRKLQ9Y4A0 524 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 SAR1BQ9Y6B6 198 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 CNTNAP1P78357 1384 aa8.35□□□□□ -1.07
SNX13-208ENST00000482558 IGLV3-22A0A075B6J6 115 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 A0A1W2PRG0 241 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 FAM86B1E9PN63 330 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 RBAK-RBAKDNI3L0D1 243 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 MEIS1O00470 390 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 PJA2O43164 708 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 AKR1B10O60218 316 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 CTNND1O60716 968 aaKnown RBP8.34□□□□□ -1.07
SNX13-208ENST00000482558 GAS7O60861 476 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 PSMD10O75832 226 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 GFPT2O94808 682 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 CTSBP07858 339 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 FAM86B2P0C5J1 330 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 CCDC172P0C7W6 258 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 EPB41P11171 864 aaKnown RBP8.34□□□□□ -1.07
SNX13-208ENST00000482558 SERPINB3P29508 390 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 ABCD1P33897 745 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 HSD17B4P51659 736 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 ZNF280AP59817 542 aaPredicted RBP8.34□□□□□ -1.07
SNX13-208ENST00000482558 BIRC3Q13489 604 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 DHCR24Q15392 516 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 IFI16Q16666 785 aaKnown RBP8.34□□□□□ -1.07
SNX13-208ENST00000482558 PTPN21Q16825 1174 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 SFMBT2Q5VUG0 894 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 LRCH2Q5VUJ6 765 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 DCAF15Q66K64 600 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 PDXDC1Q6P996 788 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 LHFPL2Q6ZUX7 228 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 EPM2AIP1Q7L775 607 aaPredicted RBP8.34□□□□□ -1.07
SNX13-208ENST00000482558 OTOP1Q7RTM1 612 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 VPS36Q86VN1 386 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 MSANTD4Q8NCY6 345 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 USP33Q8TEY7 942 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 SCFD1Q8WVM8 642 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 DDX1Q92499 740 aaKnown RBP8.34□□□□□ -1.07
SNX13-208ENST00000482558 SECISBP2LQ93073 1101 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms