RNA–Protein interactions for RNA: ENST00000481077.6

CNKSR1-206, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 865 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-206ENST00000481077 TAS1R2Q8TE23 839 aa16.73■□□□□ 0.27
CNKSR1-206ENST00000481077 SLC35C1Q96A29 364 aa16.73■□□□□ 0.27
CNKSR1-206ENST00000481077 SFXN1Q9H9B4 322 aa16.73■□□□□ 0.27
CNKSR1-206ENST00000481077 NXF1Q9UBU9 619 aaKnown RBP16.73■□□□□ 0.27
CNKSR1-206ENST00000481077 TSC2P49815 1807 aa16.73■□□□□ 0.27
CNKSR1-206ENST00000481077 PLXNA3P51805 1871 aa16.72■□□□□ 0.27
CNKSR1-206ENST00000481077 WDR27A2RRH5 827 aa16.72■□□□□ 0.27
CNKSR1-206ENST00000481077 P4HA1P13674 534 aa16.72■□□□□ 0.27
CNKSR1-206ENST00000481077 LHX1P48742 406 aa16.72■□□□□ 0.27
CNKSR1-206ENST00000481077 PUS10Q3MIT2 529 aaKnown RBP16.72■□□□□ 0.27
CNKSR1-206ENST00000481077 LIN9Q5TKA1 542 aa16.72■□□□□ 0.27
CNKSR1-206ENST00000481077 TPGS2Q68CL5 300 aa16.72■□□□□ 0.27
CNKSR1-206ENST00000481077 CREBRFQ8IUR6 639 aa16.72■□□□□ 0.27
CNKSR1-206ENST00000481077 FAM114A1Q8IWE2 563 aa16.72■□□□□ 0.27
CNKSR1-206ENST00000481077 FBXL13Q8NEE6 735 aa16.72■□□□□ 0.27
CNKSR1-206ENST00000481077 CNOT6LQ96LI5 555 aaKnown RBP16.72■□□□□ 0.27
CNKSR1-206ENST00000481077 THAP9Q9H5L6 903 aa16.72■□□□□ 0.27
CNKSR1-206ENST00000481077 DDX43Q9NXZ2 648 aaKnown RBP16.72■□□□□ 0.27
CNKSR1-206ENST00000481077 FBXW11Q9UKB1 542 aa16.72■□□□□ 0.27
CNKSR1-206ENST00000481077 SPTBN5Q9NRC6 3674 aaKnown RBP16.72■□□□□ 0.27
CNKSR1-206ENST00000481077 N4BP1O75113 896 aaKnown RBP16.71■□□□□ 0.27
CNKSR1-206ENST00000481077 ABLIM3O94929 683 aa16.71■□□□□ 0.27
CNKSR1-206ENST00000481077 ASS1P00966 412 aaKnown RBP16.71■□□□□ 0.27
CNKSR1-206ENST00000481077 ELF1P32519 619 aa16.71■□□□□ 0.27
CNKSR1-206ENST00000481077 MYL7Q01449 175 aa16.71■□□□□ 0.27
CNKSR1-206ENST00000481077 TSPY1Q01534 308 aa16.71■□□□□ 0.27
CNKSR1-206ENST00000481077 TYRO3Q06418 890 aa16.71■□□□□ 0.27
CNKSR1-206ENST00000481077 SMAD4Q13485 552 aaKnown RBP16.71■□□□□ 0.27
CNKSR1-206ENST00000481077 CBWD6Q4V339 395 aa16.71■□□□□ 0.27
CNKSR1-206ENST00000481077 CBWD3Q5JTY5 395 aa16.71■□□□□ 0.27
CNKSR1-206ENST00000481077 CBWD5Q5RIA9 395 aa16.71■□□□□ 0.27
CNKSR1-206ENST00000481077 RARS2Q5T160 578 aaKnown RBP16.71■□□□□ 0.27
CNKSR1-206ENST00000481077 CES5AQ6NT32 575 aa16.71■□□□□ 0.27
CNKSR1-206ENST00000481077 SYCE2Q6PIF2 218 aa16.71■□□□□ 0.27
CNKSR1-206ENST00000481077 LIMS2Q7Z4I7 341 aa16.71■□□□□ 0.27
CNKSR1-206ENST00000481077 TRIM59Q8IWR1 403 aa16.71■□□□□ 0.27
CNKSR1-206ENST00000481077 C12orf76Q8N812 135 aaPredicted RBP16.71■□□□□ 0.27
CNKSR1-206ENST00000481077 SMRP1Q8NCR6 262 aa16.71■□□□□ 0.27
CNKSR1-206ENST00000481077 OR10T2Q8NGX3 314 aa16.71■□□□□ 0.27
CNKSR1-206ENST00000481077 ASB2Q96Q27 587 aa16.71■□□□□ 0.27
CNKSR1-206ENST00000481077 RTP3Q9BQQ7 232 aa16.71■□□□□ 0.27
CNKSR1-206ENST00000481077 APOL5Q9BWW9 433 aa16.71■□□□□ 0.27
CNKSR1-206ENST00000481077 RAB20Q9NX57 234 aa16.71■□□□□ 0.27
CNKSR1-206ENST00000481077 MAGEC2Q9UBF1 373 aaPredicted RBP16.71■□□□□ 0.27
CNKSR1-206ENST00000481077 MAFFQ9ULX9 164 aa16.71■□□□□ 0.27
CNKSR1-206ENST00000481077 FAM50BQ9Y247 325 aa16.71■□□□□ 0.27
CNKSR1-206ENST00000481077 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.71■□□□□ 0.27
CNKSR1-206ENST00000481077 PRRG1O14668 218 aa16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 GABRDO14764 452 aa16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 TACC1O75410 805 aa16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 C8AP07357 584 aa16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 FAM163BP0C2L3 166 aa16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 OR4Q2P0C623 313 aa16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 ATF2P15336 505 aa16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 WARSP23381 471 aaKnown RBP16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 PCSK1P29120 753 aa16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 FMO5P49326 533 aa16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 NOP14P78316 857 aaKnown RBP16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 ITIH3Q06033 890 aa16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 CETN1Q12798 172 aa16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 GPR17Q13304 367 aa16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 PTCRAQ6ISU1 281 aaPredicted RBP16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 TMC5Q6UXY8 1006 aa16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 CCDC149Q6ZUS6 474 aa16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 RTL10Q7L3V2 364 aa16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 ENOX1Q8TC92 643 aaKnown RBP16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 ACBD6Q9BR61 282 aa16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 PI4K2AQ9BTU6 479 aa16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 NAT10Q9H0A0 1025 aaKnown RBP16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 ZCWPW1Q9H0M4 648 aa16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 S1PR5Q9H228 398 aa16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 ADAM7Q9H2U9 754 aa16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 SNX25Q9H3E2 840 aa16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 ZDHHC7Q9NXF8 308 aa16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 AFF4Q9UHB7 1163 aaKnown RBP16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 POLIQ9UNA4 740 aa16.7■□□□□ 0.26
CNKSR1-206ENST00000481077 RFPL2O75678 378 aa16.69■□□□□ 0.26
CNKSR1-206ENST00000481077 AFPP02771 609 aaKnown RBP16.69■□□□□ 0.26
CNKSR1-206ENST00000481077 GNL1P36915 607 aaPredicted RBP16.69■□□□□ 0.26
CNKSR1-206ENST00000481077 KCNQ1P51787 676 aa16.69■□□□□ 0.26
CNKSR1-206ENST00000481077 ADCY1Q08828 1119 aa16.69■□□□□ 0.26
CNKSR1-206ENST00000481077 KCNH2Q12809 1159 aa16.69■□□□□ 0.26
CNKSR1-206ENST00000481077 UVSSAQ2YD98 709 aa16.69■□□□□ 0.26
CNKSR1-206ENST00000481077 SLC39A12Q504Y0 691 aa16.69■□□□□ 0.26
CNKSR1-206ENST00000481077 WDR44Q5JSH3 913 aa16.69■□□□□ 0.26
CNKSR1-206ENST00000481077 PPM1LQ5SGD2 360 aa16.69■□□□□ 0.26
CNKSR1-206ENST00000481077 SPOPLQ6IQ16 392 aa16.69■□□□□ 0.26
CNKSR1-206ENST00000481077 SCARA5Q6ZMJ2 495 aa16.69■□□□□ 0.26
CNKSR1-206ENST00000481077 RNF19BQ6ZMZ0 732 aa16.69■□□□□ 0.26
CNKSR1-206ENST00000481077 C11orf57Q6ZUT1 292 aaPredicted RBP16.69■□□□□ 0.26
CNKSR1-206ENST00000481077 OSTM1Q86WC4 334 aa16.69■□□□□ 0.26
CNKSR1-206ENST00000481077 IRF2BP1Q8IU81 584 aa16.69■□□□□ 0.26
CNKSR1-206ENST00000481077 TCEAL8Q8IYN2 117 aa16.69■□□□□ 0.26
CNKSR1-206ENST00000481077 DCP1BQ8IZD4 617 aaKnown RBP16.69■□□□□ 0.26
CNKSR1-206ENST00000481077 CMASQ8NFW8 434 aaPredicted RBP16.69■□□□□ 0.26
CNKSR1-206ENST00000481077 SLC7A14Q8TBB6 771 aa16.69■□□□□ 0.26
CNKSR1-206ENST00000481077 KBTBD7Q8WVZ9 684 aa16.69■□□□□ 0.26
CNKSR1-206ENST00000481077 SEMA4DQ92854 862 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms