RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 NFKBIBQ15653 356 aa16.24■□□□□ 0.19
ABCF3-213ENST00000480539 CREBRFQ8IUR6 639 aa16.24■□□□□ 0.19
ABCF3-213ENST00000480539 TRIM59Q8IWR1 403 aa16.24■□□□□ 0.19
ABCF3-213ENST00000480539 C12orf76Q8N812 135 aaPredicted RBP16.24■□□□□ 0.19
ABCF3-213ENST00000480539 FEZF2Q8TBJ5 459 aa16.24■□□□□ 0.19
ABCF3-213ENST00000480539 KBTBD7Q8WVZ9 684 aa16.24■□□□□ 0.19
ABCF3-213ENST00000480539 MSLNLQ96KJ4 702 aa16.24■□□□□ 0.19
ABCF3-213ENST00000480539 IMPG2Q9BZV3 1241 aa16.24■□□□□ 0.19
ABCF3-213ENST00000480539 CDH22Q9UJ99 828 aa16.24■□□□□ 0.19
ABCF3-213ENST00000480539 FBXW11Q9UKB1 542 aa16.24■□□□□ 0.19
ABCF3-213ENST00000480539 OR6C75A6NL08 312 aa16.23■□□□□ 0.19
ABCF3-213ENST00000480539 LRRN2O75325 713 aa16.23■□□□□ 0.19
ABCF3-213ENST00000480539 ASS1P00966 412 aaKnown RBP16.23■□□□□ 0.19
ABCF3-213ENST00000480539 ACAT1P24752 427 aaKnown RBP16.23■□□□□ 0.19
ABCF3-213ENST00000480539 FMO5P49326 533 aa16.23■□□□□ 0.19
ABCF3-213ENST00000480539 MARSP56192 900 aaKnown RBP16.23■□□□□ 0.19
ABCF3-213ENST00000480539 SKOR2Q2VWA4 1001 aaPredicted RBP16.23■□□□□ 0.19
ABCF3-213ENST00000480539 ANO6Q4KMQ2 910 aa16.23■□□□□ 0.19
ABCF3-213ENST00000480539 ZNF667Q5HYK9 610 aa16.23■□□□□ 0.19
ABCF3-213ENST00000480539 RARS2Q5T160 578 aaKnown RBP16.23■□□□□ 0.19
ABCF3-213ENST00000480539 LILRA6Q6PI73 481 aa16.23■□□□□ 0.19
ABCF3-213ENST00000480539 TMEM184AQ6ZMB5 413 aa16.23■□□□□ 0.19
ABCF3-213ENST00000480539 IRF2BP1Q8IU81 584 aa16.23■□□□□ 0.19
ABCF3-213ENST00000480539 TMEM86AQ8N2M4 240 aa16.23■□□□□ 0.19
ABCF3-213ENST00000480539 KREMEN2Q8NCW0 462 aa16.23■□□□□ 0.19
ABCF3-213ENST00000480539 FBXL13Q8NEE6 735 aa16.23■□□□□ 0.19
ABCF3-213ENST00000480539 SEMA4DQ92854 862 aa16.23■□□□□ 0.19
ABCF3-213ENST00000480539 PGLYRP2Q96PD5 576 aa16.23■□□□□ 0.19
ABCF3-213ENST00000480539 MRPL45Q9BRJ2 306 aaKnown RBP16.23■□□□□ 0.19
ABCF3-213ENST00000480539 THAP9Q9H5L6 903 aa16.23■□□□□ 0.19
ABCF3-213ENST00000480539 VRTNQ9H8Y1 702 aa16.23■□□□□ 0.19
ABCF3-213ENST00000480539 APOBEC3GQ9HC16 384 aaKnown RBP16.23■□□□□ 0.19
ABCF3-213ENST00000480539 CD207Q9UJ71 328 aa16.23■□□□□ 0.19
ABCF3-213ENST00000480539 NFE2L3Q9Y4A8 694 aa16.23■□□□□ 0.19
ABCF3-213ENST00000480539 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.23■□□□□ 0.19
ABCF3-213ENST00000480539 RFPL2O75678 378 aa16.22■□□□□ 0.19
ABCF3-213ENST00000480539 MTIF2P46199 727 aaKnown RBP16.22■□□□□ 0.19
ABCF3-213ENST00000480539 KCNQ1P51787 676 aa16.22■□□□□ 0.19
ABCF3-213ENST00000480539 CCDC142Q17RM4 750 aa16.22■□□□□ 0.19
ABCF3-213ENST00000480539 SGSM1Q2NKQ1 1148 aa16.22■□□□□ 0.19
ABCF3-213ENST00000480539 SLC39A12Q504Y0 691 aa16.22■□□□□ 0.19
ABCF3-213ENST00000480539 CT47A1Q5JQC4 288 aaPredicted RBP16.22■□□□□ 0.19
ABCF3-213ENST00000480539 LIN9Q5TKA1 542 aa16.22■□□□□ 0.19
ABCF3-213ENST00000480539 SYCE2Q6PIF2 218 aa16.22■□□□□ 0.19
ABCF3-213ENST00000480539 RNF19BQ6ZMZ0 732 aa16.22■□□□□ 0.19
ABCF3-213ENST00000480539 LIMS2Q7Z4I7 341 aa16.22■□□□□ 0.19
ABCF3-213ENST00000480539 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.22■□□□□ 0.19
ABCF3-213ENST00000480539 THEM5Q8N1Q8 247 aa16.22■□□□□ 0.19
ABCF3-213ENST00000480539 AOPEPQ8N6M6 819 aa16.22■□□□□ 0.19
ABCF3-213ENST00000480539 SMRP1Q8NCR6 262 aa16.22■□□□□ 0.19
ABCF3-213ENST00000480539 SLC7A14Q8TBB6 771 aa16.22■□□□□ 0.19
ABCF3-213ENST00000480539 OXCT2Q9BYC2 517 aaPredicted RBP16.22■□□□□ 0.19
ABCF3-213ENST00000480539 SFXN1Q9H9B4 322 aa16.22■□□□□ 0.19
ABCF3-213ENST00000480539 SAMSN1Q9NSI8 373 aaKnown RBP16.22■□□□□ 0.19
ABCF3-213ENST00000480539 DDX43Q9NXZ2 648 aaKnown RBP16.22■□□□□ 0.19
ABCF3-213ENST00000480539 N4BP1O75113 896 aaKnown RBP16.21■□□□□ 0.19
ABCF3-213ENST00000480539 AFPP02771 609 aaKnown RBP16.21■□□□□ 0.19
ABCF3-213ENST00000480539 C8AP07357 584 aa16.21■□□□□ 0.19
ABCF3-213ENST00000480539 WEE2P0C1S8 567 aa16.21■□□□□ 0.19
ABCF3-213ENST00000480539 WARSP23381 471 aaKnown RBP16.21■□□□□ 0.19
ABCF3-213ENST00000480539 ASPAP45381 313 aa16.21■□□□□ 0.19
ABCF3-213ENST00000480539 PSMC1P62191 440 aaKnown RBP16.21■□□□□ 0.19
ABCF3-213ENST00000480539 ADCY1Q08828 1119 aa16.21■□□□□ 0.19
ABCF3-213ENST00000480539 KCNH2Q12809 1159 aa16.21■□□□□ 0.19
ABCF3-213ENST00000480539 LEXMQ3ZCV2 418 aa16.21■□□□□ 0.19
ABCF3-213ENST00000480539 ELMSAN1Q6PJG2 1045 aa16.21■□□□□ 0.19
ABCF3-213ENST00000480539 TMC5Q6UXY8 1006 aa16.21■□□□□ 0.19
ABCF3-213ENST00000480539 DPH6Q7L8W6 267 aa16.21■□□□□ 0.19
ABCF3-213ENST00000480539 FAM114A1Q8IWE2 563 aa16.21■□□□□ 0.19
ABCF3-213ENST00000480539 CCDC150Q8NCX0 1101 aa16.21■□□□□ 0.19
ABCF3-213ENST00000480539 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.21■□□□□ 0.19
ABCF3-213ENST00000480539 ENOX1Q8TC92 643 aaKnown RBP16.21■□□□□ 0.19
ABCF3-213ENST00000480539 TAF4BQ92750 862 aa16.21■□□□□ 0.19
ABCF3-213ENST00000480539 NIF3L1Q9GZT8 377 aa16.21■□□□□ 0.19
ABCF3-213ENST00000480539 ZCWPW1Q9H0M4 648 aa16.21■□□□□ 0.19
ABCF3-213ENST00000480539 SDCBP2Q9H190 292 aa16.21■□□□□ 0.19
ABCF3-213ENST00000480539 SNX25Q9H3E2 840 aa16.21■□□□□ 0.19
ABCF3-213ENST00000480539 RAB20Q9NX57 234 aa16.21■□□□□ 0.19
ABCF3-213ENST00000480539 MAGEC2Q9UBF1 373 aaPredicted RBP16.21■□□□□ 0.19
ABCF3-213ENST00000480539 MTMR11A4FU01 709 aa16.2■□□□□ 0.18
ABCF3-213ENST00000480539 GRXCR2A6NFK2 248 aa16.2■□□□□ 0.18
ABCF3-213ENST00000480539 KCNJ18B7U540 433 aa16.2■□□□□ 0.18
ABCF3-213ENST00000480539 GABRDO14764 452 aa16.2■□□□□ 0.18
ABCF3-213ENST00000480539 TACC1O75410 805 aa16.2■□□□□ 0.18
ABCF3-213ENST00000480539 ABLIM3O94929 683 aa16.2■□□□□ 0.18
ABCF3-213ENST00000480539 LETM1O95202 739 aaPredicted RBP16.2■□□□□ 0.18
ABCF3-213ENST00000480539 SEC24AO95486 1093 aa16.2■□□□□ 0.18
ABCF3-213ENST00000480539 VNN2O95498 520 aa16.2■□□□□ 0.18
ABCF3-213ENST00000480539 P4HA1P13674 534 aa16.2■□□□□ 0.18
ABCF3-213ENST00000480539 HOXB8P17481 243 aaPredicted RBP16.2■□□□□ 0.18
ABCF3-213ENST00000480539 LHX1P48742 406 aa16.2■□□□□ 0.18
ABCF3-213ENST00000480539 CDH8P55286 799 aa16.2■□□□□ 0.18
ABCF3-213ENST00000480539 TSPY1Q01534 308 aa16.2■□□□□ 0.18
ABCF3-213ENST00000480539 MYL5Q02045 173 aa16.2■□□□□ 0.18
ABCF3-213ENST00000480539 SMAD4Q13485 552 aaKnown RBP16.2■□□□□ 0.18
ABCF3-213ENST00000480539 KCNJ12Q14500 433 aa16.2■□□□□ 0.18
ABCF3-213ENST00000480539 ZSCAN23Q3MJ62 389 aa16.2■□□□□ 0.18
ABCF3-213ENST00000480539 TPGS2Q68CL5 300 aa16.2■□□□□ 0.18
ABCF3-213ENST00000480539 PTCRAQ6ISU1 281 aaPredicted RBP16.2■□□□□ 0.18
ABCF3-213ENST00000480539 TTC9BQ8N6N2 239 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms