RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 GRB10Q13322 594 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 BECN1Q14457 450 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 BMS1Q14692 1282 aaKnown RBP5.38□□□□□ -1.55
PTCD3-213ENST00000480102 SF3A1Q15459 793 aaKnown RBP5.38□□□□□ -1.55
PTCD3-213ENST00000480102 UBXN11Q5T124 520 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 PLA2G4FQ68DD2 849 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 MCTP1Q6DN14 999 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 CYP26C1Q6V0L0 522 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 CABP7Q86V35 215 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 RNF168Q8IYW5 571 aaPredicted RBP5.38□□□□□ -1.55
PTCD3-213ENST00000480102 DAW1Q8N136 415 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 PIGOQ8TEQ8 1089 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 FBLIM1Q8WUP2 373 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 PABPC5Q96DU9 382 aaKnown RBP5.38□□□□□ -1.55
PTCD3-213ENST00000480102 NLRP4Q96MN2 994 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 YIPF2Q9BWQ6 316 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 STRA6Q9BX79 667 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 MRPL4Q9BYD3 311 aaKnown RBP5.38□□□□□ -1.55
PTCD3-213ENST00000480102 KRTAP9-2Q9BYQ4 174 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 SCAND2PQ9GZW5 306 aaPredicted RBP5.38□□□□□ -1.55
PTCD3-213ENST00000480102 TNMDQ9H2S6 317 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 GSX1Q9H4S2 264 aaPredicted RBP5.38□□□□□ -1.55
PTCD3-213ENST00000480102 NSUN3Q9H649 340 aaKnown RBP5.38□□□□□ -1.55
PTCD3-213ENST00000480102 CCDC86Q9H6F5 360 aaKnown RBP5.38□□□□□ -1.55
PTCD3-213ENST00000480102 CWH43Q9H720 699 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 PLEKHA5Q9HAU0 1116 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 DDX19AQ9NUU7 478 aaKnown RBP5.38□□□□□ -1.55
PTCD3-213ENST00000480102 RNF19AQ9NV58 838 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 USP25Q9UHP3 1055 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 PUF60Q9UHX1 559 aaKnown RBP5.38□□□□□ -1.55
PTCD3-213ENST00000480102 MAFFQ9ULX9 164 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 PLAGL2Q9UPG8 496 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 AP4E1Q9UPM8 1137 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 SSX2IPQ9Y2D8 614 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 PCDHB2Q9Y5E7 798 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 PCDHB12Q9Y5F1 795 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 STYXL1Q9Y6J8 313 aa5.38□□□□□ -1.55
PTCD3-213ENST00000480102 EYSQ5T1H1 3165 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.37□□□□□ -1.55
PTCD3-213ENST00000480102 LCHNA4D1U4 455 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 VWA3AA6NCI4 1184 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 K7ERI5 159 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 OFD1O75665 1012 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 TOM1L1O75674 476 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 F13A1P00488 732 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 MCF2P10911 925 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 MYOGP15173 224 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 KCNE1P15382 129 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 HOXB8P17481 243 aaPredicted RBP5.37□□□□□ -1.55
PTCD3-213ENST00000480102 GAP43P17677 238 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 ARF4P18085 180 aaPredicted RBP5.37□□□□□ -1.55
PTCD3-213ENST00000480102 CYP3A5P20815 502 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 NPTX2P47972 431 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 CD97P48960 835 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 ALDH7A1P49419 539 aaKnown RBP5.37□□□□□ -1.55
PTCD3-213ENST00000480102 RABGGTBP53611 331 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 NUCB2P80303 420 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 AMPD3Q01432 767 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 KRT17Q04695 432 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 MCL1Q07820 350 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 TMEM62Q0P6H9 643 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 GRIK3Q13003 919 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 KCNC3Q14003 757 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 NOMO2Q5JPE7 1267 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 FAM102BQ5T8I3 360 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 ADALQ6DHV7 355 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 TWF2Q6IBS0 349 aaKnown RBP5.37□□□□□ -1.55
PTCD3-213ENST00000480102 PDXDC1Q6P996 788 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 PAOXQ6QHF9 649 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 KCNT2Q6UVM3 1135 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 AGMOQ6ZNB7 445 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 Q7L0L9 218 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 PDZD3Q86UT5 571 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 SULF2Q8IWU5 870 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 ELOA2Q8IYF1 753 aaPredicted RBP5.37□□□□□ -1.55
PTCD3-213ENST00000480102 ABI1Q8IZP0 508 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 TMEM161BQ8NDZ6 487 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 SHKBP1Q8TBC3 707 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 SPPL3Q8TCT6 385 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 PPP1R13LQ8WUF5 828 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 HDAC7Q8WUI4 952 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 MYLIPQ8WY64 445 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 MRPS27Q92552 414 aaKnown RBP5.37□□□□□ -1.55
PTCD3-213ENST00000480102 LARP4BQ92615 738 aaKnown RBP5.37□□□□□ -1.55
PTCD3-213ENST00000480102 RAD54LQ92698 747 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 TMEM143Q96AN5 459 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 ZBTB10Q96DT7 871 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 CDK5RAP3Q96JB5 506 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 UROC1Q96N76 676 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 SCLT1Q96NL6 688 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 USP28Q96RU2 1077 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 FIZ1Q96SL8 496 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 ADPGKQ9BRR6 497 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 GTPBP4Q9BZE4 634 aaKnown RBP5.37□□□□□ -1.55
PTCD3-213ENST00000480102 POLR3FQ9H1D9 316 aaPredicted RBP5.37□□□□□ -1.55
PTCD3-213ENST00000480102 PRDM12Q9H4Q4 367 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 C12orf49Q9H741 205 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 MINDY3Q9H8M7 445 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 RSAD1Q9HA92 442 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 PARVGQ9HBI0 331 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms