RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 CHGBP05060 677 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 LAG3P18627 525 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 TFEBP19484 476 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 BTF3P20290 206 aaKnown RBP6.39□□□□□ -1.39
RC3H1-204ENST00000479099 FGFR4P22455 802 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 PTX3P26022 381 aaPredicted RBP6.39□□□□□ -1.39
RC3H1-204ENST00000479099 MAPK3P27361 379 aaPredicted RBP6.39□□□□□ -1.39
RC3H1-204ENST00000479099 RGS2P41220 211 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 CCT4P50991 539 aaKnown RBP6.39□□□□□ -1.39
RC3H1-204ENST00000479099 KIF11P52732 1056 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 RAD23AP54725 363 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 POLE2P56282 527 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 NKX6-1P78426 367 aaPredicted RBP6.39□□□□□ -1.39
RC3H1-204ENST00000479099 STK4Q13043 487 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 MAMLD1Q13495 774 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 SEC23AQ15436 765 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 KYNUQ16719 465 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 SHROOM1Q2M3G4 852 aaPredicted RBP6.39□□□□□ -1.39
RC3H1-204ENST00000479099 DUSP28Q4G0W2 176 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 WDR73Q6P4I2 378 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 HHIPL2Q6UWX4 724 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 CATSPERGQ6ZRH7 1159 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 ZNF804AQ7Z570 1209 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 ARMC8Q8IUR7 673 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 NOSTRINQ8IVI9 506 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 CCDC103Q8IW40 242 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 ADGRG2Q8IZP9 1017 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 ADSSL1Q8N142 457 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 SRBD1Q8N5C6 995 aaKnown RBP6.39□□□□□ -1.39
RC3H1-204ENST00000479099 ZNF507Q8TCN5 953 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 SH3RF3Q8TEJ3 882 aaPredicted RBP6.39□□□□□ -1.39
RC3H1-204ENST00000479099 TBC1D22AQ8WUA7 517 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 MAML1Q92585 1016 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 PTP4A1Q93096 173 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 EXOC4Q96A65 974 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 SDCCAG3Q96C92 435 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 IQCDQ96DY2 449 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 CABS1Q96KC9 395 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 ZDHHC15Q96MV8 337 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 NOX5Q96PH1 765 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 ALPK1Q96QP1 1244 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 UIMC1Q96RL1 719 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 DPH2Q9BQC3 489 aaPredicted RBP6.39□□□□□ -1.39
RC3H1-204ENST00000479099 TEX13BQ9BXU2 312 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 MLXIPQ9HAP2 919 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 SMURF1Q9HCE7 757 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 PDE7BQ9NP56 450 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 SERHLQ9NQF3 203 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 NECTIN3Q9NQS3 549 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 ACSS2Q9NR19 701 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.39□□□□□ -1.39
RC3H1-204ENST00000479099 CPNE7Q9UBL6 633 aa6.39□□□□□ -1.39
RC3H1-204ENST00000479099 CHORDC1Q9UHD1 332 aaPredicted RBP6.39□□□□□ -1.39
RC3H1-204ENST00000479099 SF3B6Q9Y3B4 125 aaKnown RBP6.39□□□□□ -1.39
RC3H1-204ENST00000479099 C2orf81A6NN90 581 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 GNAT3A8MTJ3 354 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 SH2B2O14492 632 aaPredicted RBP6.38□□□□□ -1.39
RC3H1-204ENST00000479099 TXNL1O43396 289 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 TBX10O75333 385 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 LRIG2O94898 1065 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 SNX4O95219 450 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 TK1P04183 234 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 SNRNP70P08621 437 aaKnown RBP6.38□□□□□ -1.39
RC3H1-204ENST00000479099 CLEC2LP0C7M8 214 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 LAMP2P13473 410 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 LCP1P13796 627 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 PDE6AP16499 860 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 ARL3P36405 182 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 DPP6P42658 865 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 CLCN7P51798 805 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 ZNF41P51814 821 aaPredicted RBP6.38□□□□□ -1.39
RC3H1-204ENST00000479099 SUMO3P55854 103 aaPredicted RBP6.38□□□□□ -1.39
RC3H1-204ENST00000479099 ACTR2P61160 394 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 KCNAB2Q13303 367 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 IKZF1Q13422 519 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 PRPF4BQ13523 1007 aaKnown RBP6.38□□□□□ -1.39
RC3H1-204ENST00000479099 CUL4BQ13620 913 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 ANKRD1Q15327 319 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 NKPD1Q17RQ9 610 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 DPY19L1Q2PZI1 675 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 PITRM1Q5JRX3 1037 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 ATPAF1Q5TC12 328 aaPredicted RBP6.38□□□□□ -1.39
RC3H1-204ENST00000479099 TIGD7Q6NT04 549 aaPredicted RBP6.38□□□□□ -1.39
RC3H1-204ENST00000479099 FBXO38Q6PIJ6 1188 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 SLC22A25Q6T423 547 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 THAP5Q7Z6K1 395 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 ZFPM1Q8IX07 1006 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 FLAD1Q8NFF5 587 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 GABPB2Q8TAK5 448 aaPredicted RBP6.38□□□□□ -1.39
RC3H1-204ENST00000479099 ZFAND2BQ8WV99 257 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 RNF125Q96EQ8 232 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 ZNF764Q96H86 408 aaPredicted RBP6.38□□□□□ -1.39
RC3H1-204ENST00000479099 SUCLG2Q96I99 432 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 C16orf45Q96MC5 204 aaPredicted RBP6.38□□□□□ -1.39
RC3H1-204ENST00000479099 TMEM237Q96Q45 408 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 ANO3Q9BYT9 981 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 TRIM5Q9C035 493 aa6.38□□□□□ -1.39
RC3H1-204ENST00000479099 SEPSECSQ9HD40 501 aaKnown RBP6.38□□□□□ -1.39
RC3H1-204ENST00000479099 SEPT11Q9NVA2 429 aaKnown RBP6.38□□□□□ -1.39
RC3H1-204ENST00000479099 MCM9Q9NXL9 1143 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms