RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 CD8B2A6NJW9 211 aa3.57□□□□□ -1.84
XRN1-211ENST00000477237 TOR1BO14657 336 aa3.57□□□□□ -1.84
XRN1-211ENST00000477237 GPR32O75388 356 aa3.57□□□□□ -1.84
XRN1-211ENST00000477237 ENDOD1O94919 500 aa3.57□□□□□ -1.84
XRN1-211ENST00000477237 FGBP02675 491 aa3.57□□□□□ -1.84
XRN1-211ENST00000477237 FAM163BP0C2L3 166 aa3.57□□□□□ -1.84
XRN1-211ENST00000477237 SCAND1P57086 179 aa3.57□□□□□ -1.84
XRN1-211ENST00000477237 MRPS9P82933 396 aaKnown RBP3.57□□□□□ -1.84
XRN1-211ENST00000477237 ZNF844Q08AG5 666 aa3.57□□□□□ -1.84
XRN1-211ENST00000477237 HLXQ14774 488 aaPredicted RBP3.57□□□□□ -1.84
XRN1-211ENST00000477237 MUM1Q2TAK8 710 aa3.57□□□□□ -1.84
XRN1-211ENST00000477237 GJC2Q5T442 439 aaPredicted RBP3.57□□□□□ -1.84
XRN1-211ENST00000477237 C8orf58Q8NAV2 365 aa3.57□□□□□ -1.84
XRN1-211ENST00000477237 FANCBQ8NB91 859 aa3.57□□□□□ -1.84
XRN1-211ENST00000477237 RNPC3Q96LT9 517 aaKnown RBP3.57□□□□□ -1.84
XRN1-211ENST00000477237 ALG8Q9BVK2 526 aa3.57□□□□□ -1.84
XRN1-211ENST00000477237 CHMP4AQ9BY43 222 aa3.57□□□□□ -1.84
XRN1-211ENST00000477237 DNM3Q9UQ16 869 aa3.57□□□□□ -1.84
XRN1-211ENST00000477237 NEMP1O14524 444 aa3.56□□□□□ -1.84
XRN1-211ENST00000477237 AGFG2O95081 481 aa3.56□□□□□ -1.84
XRN1-211ENST00000477237 GAS8-AS1O95177 125 aa3.56□□□□□ -1.84
XRN1-211ENST00000477237 OAZ2O95190 189 aa3.56□□□□□ -1.84
XRN1-211ENST00000477237 AMY1AP04745 511 aa3.56□□□□□ -1.84
XRN1-211ENST00000477237 SESN3P58005 492 aa3.56□□□□□ -1.84
XRN1-211ENST00000477237 HTRA4P83105 476 aaPredicted RBP3.56□□□□□ -1.84
XRN1-211ENST00000477237 SEPT2Q15019 361 aa3.56□□□□□ -1.84
XRN1-211ENST00000477237 TWIST1Q15672 202 aa3.56□□□□□ -1.84
XRN1-211ENST00000477237 CCDC144BQ3MJ40 725 aa3.56□□□□□ -1.84
XRN1-211ENST00000477237 PLAC9Q5JTB6 97 aa3.56□□□□□ -1.84
XRN1-211ENST00000477237 SHC4Q6S5L8 630 aa3.56□□□□□ -1.84
XRN1-211ENST00000477237 SLC29A4Q7RTT9 530 aa3.56□□□□□ -1.84
XRN1-211ENST00000477237 ZNF551Q7Z340 670 aaPredicted RBP3.56□□□□□ -1.84
XRN1-211ENST00000477237 CHSY1Q86X52 802 aa3.56□□□□□ -1.84
XRN1-211ENST00000477237 ZGPATQ8N5A5 531 aaKnown RBP3.56□□□□□ -1.84
XRN1-211ENST00000477237 TBC1D5Q92609 795 aa3.56□□□□□ -1.84
XRN1-211ENST00000477237 TRMOQ9BU70 441 aa3.56□□□□□ -1.84
XRN1-211ENST00000477237 HIPK2Q9H2X6 1198 aa3.56□□□□□ -1.84
XRN1-211ENST00000477237 EHD3Q9NZN3 535 aa3.56□□□□□ -1.84
XRN1-211ENST00000477237 PCDHGA2Q9Y5H1 932 aa3.56□□□□□ -1.84
XRN1-211ENST00000477237 SHROOM4Q9ULL8 1493 aa3.55□□□□□ -1.84
XRN1-211ENST00000477237 MYBBP1AQ9BQG0 1328 aaKnown RBP3.55□□□□□ -1.84
XRN1-211ENST00000477237 LY6G6EA0A0G2JKS1 128 aa3.55□□□□□ -1.84
XRN1-211ENST00000477237 CCDC195A0A1B0GUA6 201 aa3.55□□□□□ -1.84
XRN1-211ENST00000477237 FAM90A8PA6NJQ4 464 aa3.55□□□□□ -1.84
XRN1-211ENST00000477237 ULK1O75385 1050 aa3.55□□□□□ -1.84
XRN1-211ENST00000477237 HAUS5O94927 633 aa3.55□□□□□ -1.84
XRN1-211ENST00000477237 FAM90A13PP0C7W8 464 aa3.55□□□□□ -1.84
XRN1-211ENST00000477237 FAM90A24PP0C7X0 464 aa3.55□□□□□ -1.84
XRN1-211ENST00000477237 MTHFD2P13995 350 aa3.55□□□□□ -1.84
XRN1-211ENST00000477237 NDUFB7P17568 137 aa3.55□□□□□ -1.84
XRN1-211ENST00000477237 DDCP20711 480 aa3.55□□□□□ -1.84
XRN1-211ENST00000477237 NPTX2P47972 431 aa3.55□□□□□ -1.84
XRN1-211ENST00000477237 TRIM71Q2Q1W2 868 aaKnown RBP3.55□□□□□ -1.84
XRN1-211ENST00000477237 DACT2Q5SW24 774 aa3.55□□□□□ -1.84
XRN1-211ENST00000477237 UBAP2Q5T6F2 1119 aaKnown RBP3.55□□□□□ -1.84
XRN1-211ENST00000477237 C9orf47Q6ZRZ4 202 aa3.55□□□□□ -1.84
XRN1-211ENST00000477237 PNLDC1Q8NA58 520 aaKnown RBP3.55□□□□□ -1.84
XRN1-211ENST00000477237 C16orf52Q8NHV5 167 aa3.55□□□□□ -1.84
XRN1-211ENST00000477237 PIGOQ8TEQ8 1089 aa3.55□□□□□ -1.84
XRN1-211ENST00000477237 FKBP10Q96AY3 582 aa3.55□□□□□ -1.84
XRN1-211ENST00000477237 COQ8BQ96D53 544 aa3.55□□□□□ -1.84
XRN1-211ENST00000477237 MFSD3Q96ES6 412 aa3.55□□□□□ -1.84
XRN1-211ENST00000477237 TXLNGQ9NUQ3 528 aa3.55□□□□□ -1.84
XRN1-211ENST00000477237 WDR17Q8IZU2 1322 aa3.54□□□□□ -1.84
XRN1-211ENST00000477237 SMAD6O43541 496 aaKnown RBP3.54□□□□□ -1.84
XRN1-211ENST00000477237 MYCLP1P12525 358 aaPredicted RBP3.54□□□□□ -1.84
XRN1-211ENST00000477237 ATP8B2P98198 1209 aa3.54□□□□□ -1.84
XRN1-211ENST00000477237 SRSF2Q01130 221 aaKnown RBP3.54□□□□□ -1.84
XRN1-211ENST00000477237 BMPR2Q13873 1038 aa3.54□□□□□ -1.84
XRN1-211ENST00000477237 ATP2B3Q16720 1220 aa3.54□□□□□ -1.84
XRN1-211ENST00000477237 LEXMQ3ZCV2 418 aa3.54□□□□□ -1.84
XRN1-211ENST00000477237 DALRD3Q5D0E6 543 aaKnown RBP3.54□□□□□ -1.84
XRN1-211ENST00000477237 DGKKQ5KSL6 1271 aa3.54□□□□□ -1.84
XRN1-211ENST00000477237 UTP14CQ5TAP6 766 aaKnown RBP3.54□□□□□ -1.84
XRN1-211ENST00000477237 MIS18BP1Q6P0N0 1132 aa3.54□□□□□ -1.84
XRN1-211ENST00000477237 C18orf65Q6ZTR6 163 aa3.54□□□□□ -1.84
XRN1-211ENST00000477237 CFAP52Q8N1V2 620 aa3.54□□□□□ -1.84
XRN1-211ENST00000477237 NLGN4YQ8NFZ3 816 aaPredicted RBP3.54□□□□□ -1.84
XRN1-211ENST00000477237 DPF2Q92785 391 aa3.54□□□□□ -1.84
XRN1-211ENST00000477237 CYFIP2Q96F07 1278 aa3.54□□□□□ -1.84
XRN1-211ENST00000477237 KLHL32Q96NJ5 620 aa3.54□□□□□ -1.84
XRN1-211ENST00000477237 TTC1Q99614 292 aa3.54□□□□□ -1.84
XRN1-211ENST00000477237 C11orf54Q9H0W9 315 aaPredicted RBP3.54□□□□□ -1.84
XRN1-211ENST00000477237 PIF1Q9H611 641 aa3.54□□□□□ -1.84
XRN1-211ENST00000477237 IFT22Q9H7X7 185 aa3.54□□□□□ -1.84
XRN1-211ENST00000477237 ARHGEF3Q9NR81 526 aa3.54□□□□□ -1.84
XRN1-211ENST00000477237 KLHL13Q9P2N7 655 aa3.54□□□□□ -1.84
XRN1-211ENST00000477237 ICKQ9UPZ9 632 aa3.54□□□□□ -1.84
XRN1-211ENST00000477237 TTC3P53804 2025 aa3.54□□□□□ -1.84
XRN1-211ENST00000477237 A0A0B4J269 797 aa3.53□□□□□ -1.84
XRN1-211ENST00000477237 PDE8AO60658 829 aa3.53□□□□□ -1.84
XRN1-211ENST00000477237 CDC45O75419 566 aa3.53□□□□□ -1.84
XRN1-211ENST00000477237 TMEM191BP0C7N4 346 aa3.53□□□□□ -1.84
XRN1-211ENST00000477237 OSMP13725 252 aa3.53□□□□□ -1.84
XRN1-211ENST00000477237 PRF1P14222 555 aa3.53□□□□□ -1.84
XRN1-211ENST00000477237 BPIP17213 487 aa3.53□□□□□ -1.84
XRN1-211ENST00000477237 RHDQ02161 417 aa3.53□□□□□ -1.84
XRN1-211ENST00000477237 MALLQ13021 153 aa3.53□□□□□ -1.84
XRN1-211ENST00000477237 STRN3Q13033 797 aa3.53□□□□□ -1.84
XRN1-211ENST00000477237 TUBB3Q13509 450 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms