RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 CCSAPQ6IQ19 270 aaPredicted RBP7.05□□□□□ -1.28
CCDC30-209ENST00000477155 ALKAL1Q6UXT8 129 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 TRIM72Q6ZMU5 477 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 ERICH1Q86X53 443 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 GSPT2Q8IYD1 628 aaKnown RBP7.05□□□□□ -1.28
CCDC30-209ENST00000477155 PCSK9Q8NBP7 692 aaKnown RBP7.05□□□□□ -1.28
CCDC30-209ENST00000477155 TMEM35BQ8NCS4 154 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 MSANTD4Q8NCY6 345 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 LPIN3Q9BQK8 851 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 MRPL45Q9BRJ2 306 aaKnown RBP7.05□□□□□ -1.28
CCDC30-209ENST00000477155 ARFGAP3Q9NP61 516 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 ST7Q9NRC1 585 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 NR2E1Q9Y466 385 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 GOLGA8SH3BPF8 625 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 INHAP05111 366 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 GJC1P36383 396 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 ACLYP53396 1101 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 TUBB4BP68371 445 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 POU5F1Q01860 360 aaKnown RBP7.05□□□□□ -1.28
CCDC30-209ENST00000477155 PTPN11Q06124 597 aaPredicted RBP7.05□□□□□ -1.28
CCDC30-209ENST00000477155 MAMLD1Q13495 774 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 PCBP1Q15365 356 aaKnown RBP eCLIP7.05□□□□□ -1.28
CCDC30-209ENST00000477155 ZBTB6Q15916 424 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 LONRF2Q1L5Z9 754 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 CCDC70Q6NSX1 233 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 CC2D1AQ6P1N0 951 aaPredicted RBP7.05□□□□□ -1.28
CCDC30-209ENST00000477155 ACOT1Q86TX2 421 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 OR6B3Q8NGW1 331 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 RNPC3Q96LT9 517 aaKnown RBP7.05□□□□□ -1.28
CCDC30-209ENST00000477155 DDX47Q9H0S4 455 aaKnown RBP7.05□□□□□ -1.28
CCDC30-209ENST00000477155 RNF14Q9UBS8 474 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 CEP83Q9Y592 693 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 SCN10AQ9Y5Y9 1956 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 ZSCAN5CA6NGD5 496 aaPredicted RBP7.04□□□□□ -1.28
CCDC30-209ENST00000477155 PGRMC1O00264 195 aaKnown RBP7.04□□□□□ -1.28
CCDC30-209ENST00000477155 MMP8P22894 467 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 MAP2K2P36507 400 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 HADHBP55084 474 aaKnown RBP7.04□□□□□ -1.28
CCDC30-209ENST00000477155 ZNF618Q5T7W0 954 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 C9orf57Q5W0N0 161 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 C11orf63Q6NUN7 778 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 C8orf74Q6P047 294 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 NT5DC4Q86YG4 428 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 REM2Q8IYK8 340 aaPredicted RBP7.04□□□□□ -1.28
CCDC30-209ENST00000477155 MMGT1Q8N4V1 131 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 UBL4BQ8N7F7 174 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 SH3TC2Q8TF17 1288 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 GLT1D1Q96MS3 346 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 GAD1Q99259 594 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.04□□□□□ -1.28
CCDC30-209ENST00000477155 TRPV6Q9H1D0 765 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 SYNCQ9H7C4 482 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 FAM49BQ9NUQ9 324 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 CNTN3Q9P232 1028 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 CYTH4Q9UIA0 394 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 PADI3Q9ULW8 664 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 BARX2Q9UMQ3 279 aaPredicted RBP7.04□□□□□ -1.28
CCDC30-209ENST00000477155 UBQLN1Q9UMX0 589 aaKnown RBP7.04□□□□□ -1.28
CCDC30-209ENST00000477155 ESYT3A0FGR9 886 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 O00370 1275 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 SPTLC1O15269 473 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 PYGMP11217 842 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 MLH1P40692 756 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 PTP4A2Q12974 167 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 ZFYVE27Q5T4F4 411 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 DCUN1D2Q6PH85 259 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 PHF13Q86YI8 300 aaPredicted RBP7.04□□□□□ -1.28
CCDC30-209ENST00000477155 SENP6Q9GZR1 1112 aaPredicted RBP7.04□□□□□ -1.28
CCDC30-209ENST00000477155 CYP3A43Q9HB55 503 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 HMX1Q9NP08 348 aaPredicted RBP7.04□□□□□ -1.28
CCDC30-209ENST00000477155 FAM105AQ9NUU6 356 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 TRIM17Q9Y577 477 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 CCDC151A5D8V7 595 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 M0QYV0 167 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 FKTNO75072 461 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 MTA2O94776 668 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 MYBL1P10243 752 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 MYBL2P10244 700 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 TRADDQ15628 312 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 MAP3K21Q5TCX8 1036 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 ACTRT1Q8TDG2 376 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 TRIM11Q96F44 468 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 MCEEQ96PE7 176 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 RPS6KC1Q96S38 1066 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 NT5C1AQ9BXI3 368 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 VRTNQ9H8Y1 702 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 MRPL47Q9HD33 250 aaKnown RBP7.04□□□□□ -1.28
CCDC30-209ENST00000477155 AVENQ9NQS1 362 aaPredicted RBP7.04□□□□□ -1.28
CCDC30-209ENST00000477155 PARVAQ9NVD7 372 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 RAB21Q9UL25 225 aa7.04□□□□□ -1.28
CCDC30-209ENST00000477155 A8MXQ7 604 aa7.03□□□□□ -1.28
CCDC30-209ENST00000477155 KPNA7A9QM74 516 aa7.03□□□□□ -1.28
CCDC30-209ENST00000477155 MED7O43513 233 aa7.03□□□□□ -1.28
CCDC30-209ENST00000477155 MICAL2O94851 1124 aa7.03□□□□□ -1.28
CCDC30-209ENST00000477155 GLI1P08151 1106 aa7.03□□□□□ -1.28
CCDC30-209ENST00000477155 LMO2P25791 158 aa7.03□□□□□ -1.28
CCDC30-209ENST00000477155 GRK4P32298 578 aa7.03□□□□□ -1.28
CCDC30-209ENST00000477155 PEX5P50542 639 aa7.03□□□□□ -1.28
CCDC30-209ENST00000477155 C1QBPQ07021 282 aaKnown RBP7.03□□□□□ -1.28
CCDC30-209ENST00000477155 BRD3Q15059 726 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms