RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 GPR158Q5T848 1215 aa12.62□□□□□ -0.39
VARS2-208ENST00000477052 ZNF720Q7Z2F6 126 aa12.62□□□□□ -0.39
VARS2-208ENST00000477052 ARID3BQ8IVW6 561 aaPredicted RBP12.62□□□□□ -0.39
VARS2-208ENST00000477052 MFSD6LQ8IWD5 586 aa12.62□□□□□ -0.39
VARS2-208ENST00000477052 YAF2Q8IY57 180 aa12.62□□□□□ -0.39
VARS2-208ENST00000477052 KRI1Q8N9T8 703 aaKnown RBP12.62□□□□□ -0.39
VARS2-208ENST00000477052 NOC3LQ8WTT2 800 aaKnown RBP12.62□□□□□ -0.39
VARS2-208ENST00000477052 ATRIPQ8WXE1 791 aa12.62□□□□□ -0.39
VARS2-208ENST00000477052 POMGNT1Q8WZA1 660 aa12.62□□□□□ -0.39
VARS2-208ENST00000477052 RUBCNQ92622 972 aa12.62□□□□□ -0.39
VARS2-208ENST00000477052 KCNN1Q92952 543 aa12.62□□□□□ -0.39
VARS2-208ENST00000477052 IRF7Q92985 503 aa12.62□□□□□ -0.39
VARS2-208ENST00000477052 CCSER1Q9C0I3 900 aa12.62□□□□□ -0.39
VARS2-208ENST00000477052 TRPV4Q9HBA0 871 aa12.62□□□□□ -0.39
VARS2-208ENST00000477052 FBXO4Q9UKT5 387 aa12.62□□□□□ -0.39
VARS2-208ENST00000477052 MRPS17Q9Y2R5 130 aaKnown RBP12.62□□□□□ -0.39
VARS2-208ENST00000477052 ARNTLO00327 626 aa12.61□□□□□ -0.39
VARS2-208ENST00000477052 NCAM2O15394 837 aa12.61□□□□□ -0.39
VARS2-208ENST00000477052 BMP15O95972 392 aa12.61□□□□□ -0.39
VARS2-208ENST00000477052 ATF6P18850 670 aa12.61□□□□□ -0.39
VARS2-208ENST00000477052 RPS9P46781 194 aaKnown RBP12.61□□□□□ -0.39
VARS2-208ENST00000477052 GPR15P49685 360 aa12.61□□□□□ -0.39
VARS2-208ENST00000477052 TNK2Q07912 1038 aa12.61□□□□□ -0.39
VARS2-208ENST00000477052 DMWDQ09019 674 aa12.61□□□□□ -0.39
VARS2-208ENST00000477052 PLD1Q13393 1074 aa12.61□□□□□ -0.39
VARS2-208ENST00000477052 CUL4AQ13619 759 aa12.61□□□□□ -0.39
VARS2-208ENST00000477052 MYBPC2Q14324 1141 aa12.61□□□□□ -0.39
VARS2-208ENST00000477052 GAS6Q14393 721 aa12.61□□□□□ -0.39
VARS2-208ENST00000477052 CCDC142Q17RM4 750 aa12.61□□□□□ -0.39
VARS2-208ENST00000477052 ZNF528Q3MIS6 628 aa12.61□□□□□ -0.39
VARS2-208ENST00000477052 SDHAF4Q5VUM1 108 aa12.61□□□□□ -0.39
VARS2-208ENST00000477052 RRAGBQ5VZM2 374 aa12.61□□□□□ -0.39
VARS2-208ENST00000477052 TXNDC11Q6PKC3 985 aa12.61□□□□□ -0.39
VARS2-208ENST00000477052 PSMG2Q969U7 264 aa12.61□□□□□ -0.39
VARS2-208ENST00000477052 DNAJC19Q96DA6 116 aa12.61□□□□□ -0.39
VARS2-208ENST00000477052 NELL2Q99435 816 aa12.61□□□□□ -0.39
VARS2-208ENST00000477052 FAM213AQ9BRX8 229 aa12.61□□□□□ -0.39
VARS2-208ENST00000477052 ZCWPW1Q9H0M4 648 aa12.61□□□□□ -0.39
VARS2-208ENST00000477052 MRPL44Q9H9J2 332 aaKnown RBP12.61□□□□□ -0.39
VARS2-208ENST00000477052 TMLHEQ9NVH6 421 aa12.61□□□□□ -0.39
VARS2-208ENST00000477052 C2orf42Q9NWW7 574 aa12.61□□□□□ -0.39
VARS2-208ENST00000477052 ABI2Q9NYB9 513 aaPredicted RBP12.61□□□□□ -0.39
VARS2-208ENST00000477052 NCDNQ9UBB6 729 aa12.61□□□□□ -0.39
VARS2-208ENST00000477052 MAFFQ9ULX9 164 aa12.61□□□□□ -0.39
VARS2-208ENST00000477052 STYXL1Q9Y6J8 313 aa12.61□□□□□ -0.39
VARS2-208ENST00000477052 MAN2B1O00754 1011 aa12.6□□□□□ -0.39
VARS2-208ENST00000477052 HCRTO43612 131 aa12.6□□□□□ -0.39
VARS2-208ENST00000477052 CHRNB1P11230 501 aa12.6□□□□□ -0.39
VARS2-208ENST00000477052 IDEP14735 1019 aa12.6□□□□□ -0.39
VARS2-208ENST00000477052 SYT1P21579 422 aa12.6□□□□□ -0.39
VARS2-208ENST00000477052 TAF6P49848 677 aa12.6□□□□□ -0.39
VARS2-208ENST00000477052 KPNA1P52294 538 aaPredicted RBP12.6□□□□□ -0.39
VARS2-208ENST00000477052 TFAMQ00059 246 aaKnown RBP12.6□□□□□ -0.39
VARS2-208ENST00000477052 SATB1Q01826 763 aa12.6□□□□□ -0.39
VARS2-208ENST00000477052 Q6ZS52 159 aa12.6□□□□□ -0.39
VARS2-208ENST00000477052 CD302Q8IX05 232 aa12.6□□□□□ -0.39
VARS2-208ENST00000477052 PDILTQ8N807 584 aa12.6□□□□□ -0.39
VARS2-208ENST00000477052 LEMD2Q8NC56 503 aa12.6□□□□□ -0.39
VARS2-208ENST00000477052 ZBTB44Q8NCP5 570 aa12.6□□□□□ -0.39
VARS2-208ENST00000477052 GLIS3Q8NEA6 775 aa12.6□□□□□ -0.39
VARS2-208ENST00000477052 CSGALNACT1Q8TDX6 532 aa12.6□□□□□ -0.39
VARS2-208ENST00000477052 DEPDC1BQ8WUY9 529 aa12.6□□□□□ -0.39
VARS2-208ENST00000477052 HPS3Q969F9 1004 aa12.6□□□□□ -0.39
VARS2-208ENST00000477052 BORCS6Q96GS4 357 aa12.6□□□□□ -0.39
VARS2-208ENST00000477052 STRA6Q9BX79 667 aa12.6□□□□□ -0.39
VARS2-208ENST00000477052 CHRDQ9H2X0 955 aa12.6□□□□□ -0.39
VARS2-208ENST00000477052 PCIF1Q9H4Z3 704 aa12.6□□□□□ -0.39
VARS2-208ENST00000477052 ASB7Q9H672 318 aa12.6□□□□□ -0.39
VARS2-208ENST00000477052 PRMT8Q9NR22 394 aaPredicted RBP12.6□□□□□ -0.39
VARS2-208ENST00000477052 ZSCAN32Q9NX65 697 aa12.6□□□□□ -0.39
VARS2-208ENST00000477052 GTSE1Q9NYZ3 720 aa12.6□□□□□ -0.39
VARS2-208ENST00000477052 SMG5Q9UPR3 1016 aaKnown RBP12.6□□□□□ -0.39
VARS2-208ENST00000477052 DERAQ9Y315 318 aa12.6□□□□□ -0.39
VARS2-208ENST00000477052 PCDHGA2Q9Y5H1 932 aa12.6□□□□□ -0.39
VARS2-208ENST00000477052 SRPRBQ9Y5M8 271 aaKnown RBP12.6□□□□□ -0.39
VARS2-208ENST00000477052 TCHHQ07283 1943 aa12.59□□□□□ -0.39
VARS2-208ENST00000477052 MED19A0JLT2 244 aaPredicted RBP12.59□□□□□ -0.39
VARS2-208ENST00000477052 KPNA7A9QM74 516 aa12.59□□□□□ -0.39
VARS2-208ENST00000477052 DPYSL4O14531 572 aa12.59□□□□□ -0.39
VARS2-208ENST00000477052 PPP1R37O75864 691 aa12.59□□□□□ -0.39
VARS2-208ENST00000477052 GCNT3O95395 438 aa12.59□□□□□ -0.39
VARS2-208ENST00000477052 CYP11A1P05108 521 aa12.59□□□□□ -0.39
VARS2-208ENST00000477052 TDGF1P13385 188 aa12.59□□□□□ -0.39
VARS2-208ENST00000477052 ACAT1P24752 427 aaKnown RBP12.59□□□□□ -0.39
VARS2-208ENST00000477052 POLR2BP30876 1174 aaKnown RBP12.59□□□□□ -0.39
VARS2-208ENST00000477052 MAGEA9P43362 315 aa12.59□□□□□ -0.39
VARS2-208ENST00000477052 SRSF5Q13243 272 aaKnown RBP12.59□□□□□ -0.39
VARS2-208ENST00000477052 LMBRD2Q68DH5 695 aaPredicted RBP12.59□□□□□ -0.39
VARS2-208ENST00000477052 HEATR6Q6AI08 1181 aaKnown RBP12.59□□□□□ -0.39
VARS2-208ENST00000477052 SLFN12LQ6IEE8 588 aa12.59□□□□□ -0.39
VARS2-208ENST00000477052 SV2BQ7L1I2 683 aa12.59□□□□□ -0.39
VARS2-208ENST00000477052 METTL23Q86XA0 190 aa12.59□□□□□ -0.39
VARS2-208ENST00000477052 NELL1Q92832 810 aa12.59□□□□□ -0.39
VARS2-208ENST00000477052 USP28Q96RU2 1077 aa12.59□□□□□ -0.39
VARS2-208ENST00000477052 CBWD1Q9BRT8 395 aa12.59□□□□□ -0.39
VARS2-208ENST00000477052 PI4K2AQ9BTU6 479 aa12.59□□□□□ -0.39
VARS2-208ENST00000477052 SLC46A2Q9BY10 475 aa12.59□□□□□ -0.39
VARS2-208ENST00000477052 OXCT2Q9BYC2 517 aaPredicted RBP12.59□□□□□ -0.39
VARS2-208ENST00000477052 ST6GALNAC4Q9H4F1 302 aa12.59□□□□□ -0.39
VARS2-208ENST00000477052 IL21Q9HBE4 155 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms