RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 FGF19O95750 216 aa12.39□□□□□ -0.43
BRCA1-213ENST00000476777 OR52Z1P0C646 297 aa12.39□□□□□ -0.43
BRCA1-213ENST00000476777 GABRR2P28476 465 aa12.39□□□□□ -0.43
BRCA1-213ENST00000476777 PI4KAP42356 2102 aa12.39□□□□□ -0.43
BRCA1-213ENST00000476777 AARSP49588 968 aaKnown RBP eCLIP12.39□□□□□ -0.43
BRCA1-213ENST00000476777 PEX3P56589 373 aa12.39□□□□□ -0.43
BRCA1-213ENST00000476777 GRSF1Q12849 480 aaKnown RBP eCLIP12.39□□□□□ -0.43
BRCA1-213ENST00000476777 ACAP1Q15027 740 aa12.39□□□□□ -0.43
BRCA1-213ENST00000476777 DAW1Q8N136 415 aa12.39□□□□□ -0.43
BRCA1-213ENST00000476777 TTC9BQ8N6N2 239 aa12.39□□□□□ -0.43
BRCA1-213ENST00000476777 CHFRQ96EP1 664 aa12.39□□□□□ -0.43
BRCA1-213ENST00000476777 ZBTB45Q96K62 511 aaPredicted RBP12.39□□□□□ -0.43
BRCA1-213ENST00000476777 FAM83CQ9BQN1 747 aa12.39□□□□□ -0.43
BRCA1-213ENST00000476777 EDEM2Q9BV94 578 aa12.39□□□□□ -0.43
BRCA1-213ENST00000476777 DUSP15Q9H1R2 295 aaPredicted RBP12.39□□□□□ -0.43
BRCA1-213ENST00000476777 POLR3BQ9NW08 1133 aaPredicted RBP12.39□□□□□ -0.43
BRCA1-213ENST00000476777 SMG1Q96Q15 3661 aaKnown RBP12.39□□□□□ -0.43
BRCA1-213ENST00000476777 ASXL3Q9C0F0 2248 aa12.39□□□□□ -0.43
BRCA1-213ENST00000476777 MTMR11A4FU01 709 aa12.38□□□□□ -0.43
BRCA1-213ENST00000476777 OTOL1A6NHN0 477 aaPredicted RBP12.38□□□□□ -0.43
BRCA1-213ENST00000476777 TRDMT1O14717 391 aaKnown RBP12.38□□□□□ -0.43
BRCA1-213ENST00000476777 SOAT2O75908 522 aa12.38□□□□□ -0.43
BRCA1-213ENST00000476777 HARSP12081 509 aaKnown RBP12.38□□□□□ -0.43
BRCA1-213ENST00000476777 SPINK2P20155 84 aa12.38□□□□□ -0.43
BRCA1-213ENST00000476777 LRPAP1P30533 357 aa12.38□□□□□ -0.43
BRCA1-213ENST00000476777 MCM2P49736 904 aa12.38□□□□□ -0.43
BRCA1-213ENST00000476777 FOSBP53539 338 aa12.38□□□□□ -0.43
BRCA1-213ENST00000476777 ZNF252P-AS1Q0IIN9 211 aa12.38□□□□□ -0.43
BRCA1-213ENST00000476777 FOXC1Q12948 553 aa12.38□□□□□ -0.43
BRCA1-213ENST00000476777 DMP1Q13316 513 aaPredicted RBP12.38□□□□□ -0.43
BRCA1-213ENST00000476777 MYBPC2Q14324 1141 aa12.38□□□□□ -0.43
BRCA1-213ENST00000476777 PTPAQ15257 358 aa12.38□□□□□ -0.43
BRCA1-213ENST00000476777 SEZ6Q53EL9 994 aa12.38□□□□□ -0.43
BRCA1-213ENST00000476777 ARHGAP15Q53QZ3 475 aa12.38□□□□□ -0.43
BRCA1-213ENST00000476777 HAUS3Q68CZ6 603 aa12.38□□□□□ -0.43
BRCA1-213ENST00000476777 CAMKK1Q8N5S9 505 aa12.38□□□□□ -0.43
BRCA1-213ENST00000476777 NECAB1Q8N987 351 aa12.38□□□□□ -0.43
BRCA1-213ENST00000476777 SMG9Q9H0W8 520 aaKnown RBP12.38□□□□□ -0.43
BRCA1-213ENST00000476777 TASP1Q9H6P5 420 aa12.38□□□□□ -0.43
BRCA1-213ENST00000476777 IL21Q9HBE4 155 aa12.38□□□□□ -0.43
BRCA1-213ENST00000476777 HPS4Q9NQG7 708 aa12.38□□□□□ -0.43
BRCA1-213ENST00000476777 GKN1Q9NS71 199 aa12.38□□□□□ -0.43
BRCA1-213ENST00000476777 THG1LQ9NWX6 298 aaKnown RBP12.38□□□□□ -0.43
BRCA1-213ENST00000476777 APC2O95996 2303 aa12.37□□□□□ -0.43
BRCA1-213ENST00000476777 BCLAF3A2AJT9 711 aaKnown RBP12.37□□□□□ -0.43
BRCA1-213ENST00000476777 DCLK1O15075 740 aa12.37□□□□□ -0.43
BRCA1-213ENST00000476777 HIP1RO75146 1068 aa12.37□□□□□ -0.43
BRCA1-213ENST00000476777 RNF40O75150 1001 aa12.37□□□□□ -0.43
BRCA1-213ENST00000476777 LARGE1O95461 756 aa12.37□□□□□ -0.43
BRCA1-213ENST00000476777 CAVIN2O95810 425 aa12.37□□□□□ -0.43
BRCA1-213ENST00000476777 TOP3BO95985 862 aaKnown RBP12.37□□□□□ -0.43
BRCA1-213ENST00000476777 EGFP01133 1207 aa12.37□□□□□ -0.43
BRCA1-213ENST00000476777 CXCL8P10145 99 aa12.37□□□□□ -0.43
BRCA1-213ENST00000476777 CCT6AP40227 531 aaKnown RBP12.37□□□□□ -0.43
BRCA1-213ENST00000476777 CYP4F8P98187 520 aa12.37□□□□□ -0.43
BRCA1-213ENST00000476777 CREB5Q02930 508 aa12.37□□□□□ -0.43
BRCA1-213ENST00000476777 SPAG1Q07617 926 aa12.37□□□□□ -0.43
BRCA1-213ENST00000476777 NOLC1Q14978 699 aaKnown RBP eCLIP12.37□□□□□ -0.43
BRCA1-213ENST00000476777 ZNF174Q15697 407 aa12.37□□□□□ -0.43
BRCA1-213ENST00000476777 ZBTB6Q15916 424 aa12.37□□□□□ -0.43
BRCA1-213ENST00000476777 SH3PXD2AQ5TCZ1 1133 aa12.37□□□□□ -0.43
BRCA1-213ENST00000476777 USP37Q86T82 979 aa12.37□□□□□ -0.43
BRCA1-213ENST00000476777 ITIH5Q86UX2 942 aa12.37□□□□□ -0.43
BRCA1-213ENST00000476777 NSUN7Q8NE18 718 aaKnown RBP12.37□□□□□ -0.43
BRCA1-213ENST00000476777 HHIPQ96QV1 700 aa12.37□□□□□ -0.43
BRCA1-213ENST00000476777 LPIN3Q9BQK8 851 aa12.37□□□□□ -0.43
BRCA1-213ENST00000476777 SLC46A2Q9BY10 475 aa12.37□□□□□ -0.43
BRCA1-213ENST00000476777 ADAM33Q9BZ11 813 aa12.37□□□□□ -0.43
BRCA1-213ENST00000476777 FBRSL1Q9HCM7 1045 aaKnown RBP12.37□□□□□ -0.43
BRCA1-213ENST00000476777 KMT5AQ9NQR1 393 aa12.37□□□□□ -0.43
BRCA1-213ENST00000476777 HSFX1Q9UBD0 423 aa12.37□□□□□ -0.43
BRCA1-213ENST00000476777 KIAA1024Q9UPX6 916 aa12.37□□□□□ -0.43
BRCA1-213ENST00000476777 RBM19Q9Y4C8 960 aaKnown RBP12.37□□□□□ -0.43
BRCA1-213ENST00000476777 ZNF638Q14966 1978 aaKnown RBP12.36□□□□□ -0.43
BRCA1-213ENST00000476777 LNP1A1A4G5 178 aa12.36□□□□□ -0.43
BRCA1-213ENST00000476777 TMEM8BA6NDV4 472 aa12.36□□□□□ -0.43
BRCA1-213ENST00000476777 SLC16A4O15374 487 aa12.36□□□□□ -0.43
BRCA1-213ENST00000476777 JAK2O60674 1132 aa12.36□□□□□ -0.43
BRCA1-213ENST00000476777 TOM1L1O75674 476 aa12.36□□□□□ -0.43
BRCA1-213ENST00000476777 RHOBTB1O94844 696 aa12.36□□□□□ -0.43
BRCA1-213ENST00000476777 TYMPP19971 482 aa12.36□□□□□ -0.43
BRCA1-213ENST00000476777 MAPK7Q13164 816 aa12.36□□□□□ -0.43
BRCA1-213ENST00000476777 RUNX3Q13761 415 aa12.36□□□□□ -0.43
BRCA1-213ENST00000476777 ELF2Q15723 593 aa12.36□□□□□ -0.43
BRCA1-213ENST00000476777 DAB2IPQ5VWQ8 1189 aa12.36□□□□□ -0.43
BRCA1-213ENST00000476777 TRIM68Q6AZZ1 485 aa12.36□□□□□ -0.43
BRCA1-213ENST00000476777 OVOS1Q6IE37 1185 aa12.36□□□□□ -0.43
BRCA1-213ENST00000476777 CMTM8Q8IZV2 173 aa12.36□□□□□ -0.43
BRCA1-213ENST00000476777 GATA6Q92908 595 aa12.36□□□□□ -0.43
BRCA1-213ENST00000476777 GTF3C6Q969F1 213 aa12.36□□□□□ -0.43
BRCA1-213ENST00000476777 RUSC1Q9BVN2 902 aa12.36□□□□□ -0.43
BRCA1-213ENST00000476777 EBF3Q9H4W6 596 aa12.36□□□□□ -0.43
BRCA1-213ENST00000476777 PLEKHA5Q9HAU0 1116 aa12.36□□□□□ -0.43
BRCA1-213ENST00000476777 DDX19AQ9NUU7 478 aaKnown RBP12.36□□□□□ -0.43
BRCA1-213ENST00000476777 ANKFY1Q9P2R3 1169 aa12.36□□□□□ -0.43
BRCA1-213ENST00000476777 CCL26Q9Y258 94 aa12.36□□□□□ -0.43
BRCA1-213ENST00000476777 THADAQ6YHU6 1953 aa12.36□□□□□ -0.43
BRCA1-213ENST00000476777 DENND4CQ5VZ89 1909 aa12.35□□□□□ -0.43
BRCA1-213ENST00000476777 TTC26A0AVF1 554 aa12.35□□□□□ -0.43
BRCA1-213ENST00000476777 SRRM3A6NNA2 597 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms