RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 GNL2Q13823 731 aaKnown RBP13.01□□□□□ -0.33
HDAC6-219ENST00000476625 CCDC142Q17RM4 750 aa13.01□□□□□ -0.33
HDAC6-219ENST00000476625 SDHAF4Q5VUM1 108 aa13.01□□□□□ -0.33
HDAC6-219ENST00000476625 JADE1Q6IE81 842 aa13.01□□□□□ -0.33
HDAC6-219ENST00000476625 SLC39A4Q6P5W5 647 aa13.01□□□□□ -0.33
HDAC6-219ENST00000476625 USP37Q86T82 979 aa13.01□□□□□ -0.33
HDAC6-219ENST00000476625 LRRTM3Q86VH5 581 aa13.01□□□□□ -0.33
HDAC6-219ENST00000476625 LEMD2Q8NC56 503 aa13.01□□□□□ -0.33
HDAC6-219ENST00000476625 FAM200AQ8TCP9 573 aa13.01□□□□□ -0.33
HDAC6-219ENST00000476625 PSMG2Q969U7 264 aa13.01□□□□□ -0.33
HDAC6-219ENST00000476625 BICD1Q96G01 975 aa13.01□□□□□ -0.33
HDAC6-219ENST00000476625 SLC46A2Q9BY10 475 aa13.01□□□□□ -0.33
HDAC6-219ENST00000476625 EBF3Q9H4W6 596 aa13.01□□□□□ -0.33
HDAC6-219ENST00000476625 C8orf33Q9H7E9 229 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-219ENST00000476625 INVSQ9Y283 1065 aa13.01□□□□□ -0.33
HDAC6-219ENST00000476625 EPG5Q9HCE0 2579 aa13.01□□□□□ -0.33
HDAC6-219ENST00000476625 USP24Q9UPU5 2620 aa13.01□□□□□ -0.33
HDAC6-219ENST00000476625 ANAPC1Q9H1A4 1944 aa13□□□□□ -0.33
HDAC6-219ENST00000476625 DPYSL4O14531 572 aa13□□□□□ -0.33
HDAC6-219ENST00000476625 TM4SF5O14894 197 aa13□□□□□ -0.33
HDAC6-219ENST00000476625 GIPC1O14908 333 aa13□□□□□ -0.33
HDAC6-219ENST00000476625 CLDN3O15551 220 aa13□□□□□ -0.33
HDAC6-219ENST00000476625 LRP3O75074 770 aa13□□□□□ -0.33
HDAC6-219ENST00000476625 PLS3P13797 630 aa13□□□□□ -0.33
HDAC6-219ENST00000476625 SPINK2P20155 84 aa13□□□□□ -0.33
HDAC6-219ENST00000476625 PMLP29590 882 aa13□□□□□ -0.33
HDAC6-219ENST00000476625 ALDH1A3P47895 512 aa13□□□□□ -0.33
HDAC6-219ENST00000476625 MGAT5BQ3V5L5 792 aa13□□□□□ -0.33
HDAC6-219ENST00000476625 ARSHQ5FYA8 562 aa13□□□□□ -0.33
HDAC6-219ENST00000476625 DGKKQ5KSL6 1271 aa13□□□□□ -0.33
HDAC6-219ENST00000476625 KRT79Q5XKE5 535 aa13□□□□□ -0.33
HDAC6-219ENST00000476625 TMEM150AQ86TG1 271 aa13□□□□□ -0.33
HDAC6-219ENST00000476625 RALGPS2Q86X27 583 aaPredicted RBP13□□□□□ -0.33
HDAC6-219ENST00000476625 TTC16Q8NEE8 873 aa13□□□□□ -0.33
HDAC6-219ENST00000476625 BPIFB1Q8TDL5 484 aa13□□□□□ -0.33
HDAC6-219ENST00000476625 EZH1Q92800 747 aaPredicted RBP13□□□□□ -0.33
HDAC6-219ENST00000476625 SENP8Q96LD8 212 aa13□□□□□ -0.33
HDAC6-219ENST00000476625 GKN1Q9NS71 199 aa13□□□□□ -0.33
HDAC6-219ENST00000476625 TMLHEQ9NVH6 421 aa13□□□□□ -0.33
HDAC6-219ENST00000476625 OR6C75A6NL08 312 aa12.99□□□□□ -0.33
HDAC6-219ENST00000476625 HCRTO43612 131 aa12.99□□□□□ -0.33
HDAC6-219ENST00000476625 RPP40O75818 363 aaKnown RBP12.99□□□□□ -0.33
HDAC6-219ENST00000476625 EPN2O95208 641 aa12.99□□□□□ -0.33
HDAC6-219ENST00000476625 TOP3BO95985 862 aaKnown RBP12.99□□□□□ -0.33
HDAC6-219ENST00000476625 GUCY2CP25092 1073 aa12.99□□□□□ -0.33
HDAC6-219ENST00000476625 SLC12A3P55017 1021 aa12.99□□□□□ -0.33
HDAC6-219ENST00000476625 LILRA4P59901 499 aa12.99□□□□□ -0.33
HDAC6-219ENST00000476625 PPP2R3AQ06190 1150 aa12.99□□□□□ -0.33
HDAC6-219ENST00000476625 ORC2Q13416 577 aaPredicted RBP12.99□□□□□ -0.33
HDAC6-219ENST00000476625 PDIA5Q14554 519 aa12.99□□□□□ -0.33
HDAC6-219ENST00000476625 DHX8Q14562 1220 aaKnown RBP12.99□□□□□ -0.33
HDAC6-219ENST00000476625 ARHGAP29Q52LW3 1261 aa12.99□□□□□ -0.33
HDAC6-219ENST00000476625 STPG1Q5TH74 334 aa12.99□□□□□ -0.33
HDAC6-219ENST00000476625 IL31Q6EBC2 164 aa12.99□□□□□ -0.33
HDAC6-219ENST00000476625 SPIRE2Q8WWL2 714 aa12.99□□□□□ -0.33
HDAC6-219ENST00000476625 GAB3Q8WWW8 586 aa12.99□□□□□ -0.33
HDAC6-219ENST00000476625 GPR88Q9GZN0 384 aa12.99□□□□□ -0.33
HDAC6-219ENST00000476625 TASP1Q9H6P5 420 aa12.99□□□□□ -0.33
HDAC6-219ENST00000476625 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.99□□□□□ -0.33
HDAC6-219ENST00000476625 UBQLN1Q9UMX0 589 aaKnown RBP12.99□□□□□ -0.33
HDAC6-219ENST00000476625 NOL7Q9UMY1 257 aaKnown RBP12.99□□□□□ -0.33
HDAC6-219ENST00000476625 RBM19Q9Y4C8 960 aaKnown RBP12.99□□□□□ -0.33
HDAC6-219ENST00000476625 NUP205Q92621 2012 aa12.99□□□□□ -0.33
HDAC6-219ENST00000476625 PTPRDP23468 1912 aa12.99□□□□□ -0.33
HDAC6-219ENST00000476625 ACACBO00763 2458 aa12.98□□□□□ -0.33
HDAC6-219ENST00000476625 TNRC6BQ9UPQ9 1833 aaKnown RBP12.98□□□□□ -0.33
HDAC6-219ENST00000476625 ANKRD63C9JTQ0 380 aa12.98□□□□□ -0.33
HDAC6-219ENST00000476625 RNF40O75150 1001 aa12.98□□□□□ -0.33
HDAC6-219ENST00000476625 CLTAP09496 248 aa12.98□□□□□ -0.33
HDAC6-219ENST00000476625 PLA2G4BP0C869 781 aa12.98□□□□□ -0.33
HDAC6-219ENST00000476625 CCDC192P0DO97 292 aa12.98□□□□□ -0.33
HDAC6-219ENST00000476625 HOXB3P14651 431 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-219ENST00000476625 RAP1GAPP47736 663 aa12.98□□□□□ -0.33
HDAC6-219ENST00000476625 MCM2P49736 904 aa12.98□□□□□ -0.33
HDAC6-219ENST00000476625 ACOT2P49753 483 aa12.98□□□□□ -0.33
HDAC6-219ENST00000476625 NCKAP1LP55160 1127 aa12.98□□□□□ -0.33
HDAC6-219ENST00000476625 MLLT6P55198 1093 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-219ENST00000476625 WNT7BP56706 349 aa12.98□□□□□ -0.33
HDAC6-219ENST00000476625 ITPRIPL2Q3MIP1 535 aa12.98□□□□□ -0.33
HDAC6-219ENST00000476625 SPATA1Q5VX52 437 aa12.98□□□□□ -0.33
HDAC6-219ENST00000476625 C9orf57Q5W0N0 161 aa12.98□□□□□ -0.33
HDAC6-219ENST00000476625 TXNDC8Q6A555 127 aa12.98□□□□□ -0.33
HDAC6-219ENST00000476625 ZPBP2Q6X784 338 aa12.98□□□□□ -0.33
HDAC6-219ENST00000476625 HAUS6Q7Z4H7 955 aa12.98□□□□□ -0.33
HDAC6-219ENST00000476625 MAB21L3Q8N8X9 362 aa12.98□□□□□ -0.33
HDAC6-219ENST00000476625 SYT2Q8N9I0 419 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-219ENST00000476625 C12orf50Q8NA57 414 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-219ENST00000476625 USP13Q92995 863 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-219ENST00000476625 E2F7Q96AV8 911 aa12.98□□□□□ -0.33
HDAC6-219ENST00000476625 REEP2Q9BRK0 252 aa12.98□□□□□ -0.33
HDAC6-219ENST00000476625 NTPCRQ9BSD7 190 aaKnown RBP12.98□□□□□ -0.33
HDAC6-219ENST00000476625 ZCWPW1Q9H0M4 648 aa12.98□□□□□ -0.33
HDAC6-219ENST00000476625 ABI2Q9NYB9 513 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-219ENST00000476625 ANGPTL2Q9UKU9 493 aa12.98□□□□□ -0.33
HDAC6-219ENST00000476625 LIMCH1Q9UPQ0 1083 aa12.98□□□□□ -0.33
HDAC6-219ENST00000476625 SDK1Q7Z5N4 2213 aa12.98□□□□□ -0.33
HDAC6-219ENST00000476625 VWA3AA6NCI4 1184 aa12.97□□□□□ -0.33
HDAC6-219ENST00000476625 C1QTNF9BB2RNN3 333 aa12.97□□□□□ -0.33
HDAC6-219ENST00000476625 K7ENM7 598 aa12.97□□□□□ -0.33
HDAC6-219ENST00000476625 TULP1O00294 542 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms