RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 TMC8Q8IU68 726 aa11.65□□□□□ -0.54
SEC13-214ENST00000476597 GPD1LQ8N335 351 aa11.65□□□□□ -0.54
SEC13-214ENST00000476597 C1orf127Q8N9H9 656 aa11.65□□□□□ -0.54
SEC13-214ENST00000476597 SMARCD2Q92925 531 aa11.65□□□□□ -0.54
SEC13-214ENST00000476597 HPS3Q969F9 1004 aa11.65□□□□□ -0.54
SEC13-214ENST00000476597 ASB16Q96NS5 453 aa11.65□□□□□ -0.54
SEC13-214ENST00000476597 FOXQ1Q9C009 403 aa11.65□□□□□ -0.54
SEC13-214ENST00000476597 TRPV4Q9HBA0 871 aa11.65□□□□□ -0.54
SEC13-214ENST00000476597 ZFP14Q9HCL3 533 aa11.65□□□□□ -0.54
SEC13-214ENST00000476597 CFAP45Q9UL16 551 aa11.65□□□□□ -0.54
SEC13-214ENST00000476597 AGAP1Q9UPQ3 857 aa11.65□□□□□ -0.54
SEC13-214ENST00000476597 KMT2EQ8IZD2 1858 aa11.65□□□□□ -0.54
SEC13-214ENST00000476597 CITO14578 2027 aa11.65□□□□□ -0.54
SEC13-214ENST00000476597 DOCK6Q96HP0 2047 aa11.65□□□□□ -0.54
SEC13-214ENST00000476597 NOTCH4Q99466 2003 aa11.64□□□□□ -0.55
SEC13-214ENST00000476597 KANSL1LA0AUZ9 987 aa11.64□□□□□ -0.55
SEC13-214ENST00000476597 EIF3DO15371 548 aaKnown RBP eCLIP11.64□□□□□ -0.55
SEC13-214ENST00000476597 ITGB3P05106 788 aa11.64□□□□□ -0.55
SEC13-214ENST00000476597 DCNP07585 359 aaKnown RBP11.64□□□□□ -0.55
SEC13-214ENST00000476597 GLULP15104 373 aa11.64□□□□□ -0.55
SEC13-214ENST00000476597 POLR2BP30876 1174 aaKnown RBP11.64□□□□□ -0.55
SEC13-214ENST00000476597 ME1P48163 572 aa11.64□□□□□ -0.55
SEC13-214ENST00000476597 ASIC1P78348 528 aa11.64□□□□□ -0.55
SEC13-214ENST00000476597 EHHADHQ08426 723 aa11.64□□□□□ -0.55
SEC13-214ENST00000476597 SMARCB1Q12824 385 aa11.64□□□□□ -0.55
SEC13-214ENST00000476597 TEAD2Q15562 447 aa11.64□□□□□ -0.55
SEC13-214ENST00000476597 MLF2Q15773 248 aaPredicted RBP11.64□□□□□ -0.55
SEC13-214ENST00000476597 SLC39A12Q504Y0 691 aa11.64□□□□□ -0.55
SEC13-214ENST00000476597 RESP18Q5W5W9 173 aa11.64□□□□□ -0.55
SEC13-214ENST00000476597 SCARA3Q6AZY7 606 aa11.64□□□□□ -0.55
SEC13-214ENST00000476597 CSGALNACT2Q8N6G5 542 aa11.64□□□□□ -0.55
SEC13-214ENST00000476597 LRRC52Q8N7C0 313 aa11.64□□□□□ -0.55
SEC13-214ENST00000476597 SPRYD3Q8NCJ5 442 aa11.64□□□□□ -0.55
SEC13-214ENST00000476597 PJA1Q8NG27 643 aa11.64□□□□□ -0.55
SEC13-214ENST00000476597 SHKBP1Q8TBC3 707 aa11.64□□□□□ -0.55
SEC13-214ENST00000476597 PSMG2Q969U7 264 aa11.64□□□□□ -0.55
SEC13-214ENST00000476597 ZNF560Q96MR9 790 aa11.64□□□□□ -0.55
SEC13-214ENST00000476597 OSBPL6Q9BZF3 934 aa11.64□□□□□ -0.55
SEC13-214ENST00000476597 MAGEF1Q9HAY2 307 aa11.64□□□□□ -0.55
SEC13-214ENST00000476597 PDE11AQ9HCR9 933 aa11.64□□□□□ -0.55
SEC13-214ENST00000476597 MYH11P35749 1972 aa11.64□□□□□ -0.55
SEC13-214ENST00000476597 ZNF292O60281 2723 aa11.64□□□□□ -0.55
SEC13-214ENST00000476597 CFAP54Q96N23 3096 aa11.63□□□□□ -0.55
SEC13-214ENST00000476597 PTPRZ1P23471 2315 aaPredicted RBP11.63□□□□□ -0.55
SEC13-214ENST00000476597 PVALEFA0A1B0GWK0 134 aa11.63□□□□□ -0.55
SEC13-214ENST00000476597 A0A1W2PRU2 124 aa11.63□□□□□ -0.55
SEC13-214ENST00000476597 ZNF233A6NK53 670 aa11.63□□□□□ -0.55
SEC13-214ENST00000476597 TULP1O00294 542 aaPredicted RBP11.63□□□□□ -0.55
SEC13-214ENST00000476597 TGFB1I1O43294 461 aa11.63□□□□□ -0.55
SEC13-214ENST00000476597 LRRN2O75325 713 aa11.63□□□□□ -0.55
SEC13-214ENST00000476597 SOAT2O75908 522 aa11.63□□□□□ -0.55
SEC13-214ENST00000476597 VIPR2P41587 438 aa11.63□□□□□ -0.55
SEC13-214ENST00000476597 RBP5P82980 135 aa11.63□□□□□ -0.55
SEC13-214ENST00000476597 DNM1Q05193 864 aaKnown RBP11.63□□□□□ -0.55
SEC13-214ENST00000476597 GRM2Q14416 872 aa11.63□□□□□ -0.55
SEC13-214ENST00000476597 SURF1Q15526 300 aa11.63□□□□□ -0.55
SEC13-214ENST00000476597 FAM26FQ5R3K3 315 aa11.63□□□□□ -0.55
SEC13-214ENST00000476597 VITQ6UXI7 678 aa11.63□□□□□ -0.55
SEC13-214ENST00000476597 UNC13DQ70J99 1090 aa11.63□□□□□ -0.55
SEC13-214ENST00000476597 ITIH5Q86UX2 942 aa11.63□□□□□ -0.55
SEC13-214ENST00000476597 C1orf210Q8IVY1 113 aa11.63□□□□□ -0.55
SEC13-214ENST00000476597 DCP1BQ8IZD4 617 aaKnown RBP11.63□□□□□ -0.55
SEC13-214ENST00000476597 TTC9BQ8N6N2 239 aa11.63□□□□□ -0.55
SEC13-214ENST00000476597 ZSCAN18Q8TBC5 510 aaPredicted RBP11.63□□□□□ -0.55
SEC13-214ENST00000476597 SPPL2BQ8TCT7 592 aa11.63□□□□□ -0.55
SEC13-214ENST00000476597 C2orf15Q8WU43 125 aaKnown RBP11.63□□□□□ -0.55
SEC13-214ENST00000476597 DNASE1L2Q92874 299 aa11.63□□□□□ -0.55
SEC13-214ENST00000476597 FAM84AQ96KN4 292 aa11.63□□□□□ -0.55
SEC13-214ENST00000476597 NELL2Q99435 816 aa11.63□□□□□ -0.55
SEC13-214ENST00000476597 ACBD6Q9BR61 282 aa11.63□□□□□ -0.55
SEC13-214ENST00000476597 TRMT61BQ9BVS5 477 aaKnown RBP11.63□□□□□ -0.55
SEC13-214ENST00000476597 ZNF334Q9HCZ1 680 aaPredicted RBP11.63□□□□□ -0.55
SEC13-214ENST00000476597 TRPV5Q9NQA5 729 aa11.63□□□□□ -0.55
SEC13-214ENST00000476597 INTS13Q9NVM9 706 aa11.63□□□□□ -0.55
SEC13-214ENST00000476597 GDAP2Q9NXN4 497 aa11.63□□□□□ -0.55
SEC13-214ENST00000476597 FAM13BQ9NYF5 915 aa11.63□□□□□ -0.55
SEC13-214ENST00000476597 HSPBP1Q9NZL4 362 aa11.63□□□□□ -0.55
SEC13-214ENST00000476597 SIX4Q9UIU6 781 aa11.63□□□□□ -0.55
SEC13-214ENST00000476597 ITGA11Q9UKX5 1188 aa11.63□□□□□ -0.55
SEC13-214ENST00000476597 MTF2Q9Y483 593 aaPredicted RBP11.63□□□□□ -0.55
SEC13-214ENST00000476597 FRYLO94915 3013 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 SHISA7A6NL88 538 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 FAM170BA6NMN3 283 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 GFRA3O60609 400 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 HUS1O60921 280 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 FGF19O95750 216 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 HAPLN1P10915 354 aaPredicted RBP11.62□□□□□ -0.55
SEC13-214ENST00000476597 PSMC3P17980 439 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 CD72P21854 359 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 CASP1P29466 404 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 SNRPFP62306 86 aaKnown RBP11.62□□□□□ -0.55
SEC13-214ENST00000476597 DUOXA2Q1HG44 320 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 MGAT5BQ3V5L5 792 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 GAREM2Q75VX8 874 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 FRMD5Q7Z6J6 570 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 CBWD2Q8IUF1 395 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 MFSD6LQ8IWD5 586 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 TMEM86AQ8N2M4 240 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 PDCL2Q8N4E4 241 aa11.62□□□□□ -0.55
SEC13-214ENST00000476597 OR5B17Q8NGF7 314 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms