RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 IQCEQ6IPM2 695 aa13.22□□□□□ -0.29
SSR1-205ENST00000475213 CENPPQ6IPU0 288 aa13.22□□□□□ -0.29
SSR1-205ENST00000475213 UNC13DQ70J99 1090 aa13.22□□□□□ -0.29
SSR1-205ENST00000475213 PDZD4Q76G19 769 aaPredicted RBP13.22□□□□□ -0.29
SSR1-205ENST00000475213 EPM2AIP1Q7L775 607 aaPredicted RBP13.22□□□□□ -0.29
SSR1-205ENST00000475213 ALYREFQ86V81 257 aaKnown RBP13.22□□□□□ -0.29
SSR1-205ENST00000475213 GPD1LQ8N335 351 aa13.22□□□□□ -0.29
SSR1-205ENST00000475213 C1orf127Q8N9H9 656 aa13.22□□□□□ -0.29
SSR1-205ENST00000475213 ATAD1Q8NBU5 361 aa13.22□□□□□ -0.29
SSR1-205ENST00000475213 OR10T2Q8NGX3 314 aa13.22□□□□□ -0.29
SSR1-205ENST00000475213 ZNF507Q8TCN5 953 aa13.22□□□□□ -0.29
SSR1-205ENST00000475213 CACTINQ8WUQ7 758 aaKnown RBP13.22□□□□□ -0.29
SSR1-205ENST00000475213 FAM84AQ96KN4 292 aa13.22□□□□□ -0.29
SSR1-205ENST00000475213 PHOX2BQ99453 314 aa13.22□□□□□ -0.29
SSR1-205ENST00000475213 KXD1Q9BQD3 176 aa13.22□□□□□ -0.29
SSR1-205ENST00000475213 RTP3Q9BQQ7 232 aa13.22□□□□□ -0.29
SSR1-205ENST00000475213 BLZF1Q9H2G9 400 aa13.22□□□□□ -0.29
SSR1-205ENST00000475213 PDE11AQ9HCR9 933 aa13.22□□□□□ -0.29
SSR1-205ENST00000475213 ZDHHC9Q9Y397 364 aa13.22□□□□□ -0.29
SSR1-205ENST00000475213 KPNA7A9QM74 516 aa13.21□□□□□ -0.29
SSR1-205ENST00000475213 MOSPD3O75425 235 aa13.21□□□□□ -0.29
SSR1-205ENST00000475213 MICAL2O94851 1124 aa13.21□□□□□ -0.29
SSR1-205ENST00000475213 ITGB3P05106 788 aa13.21□□□□□ -0.29
SSR1-205ENST00000475213 POLR2BP30876 1174 aaKnown RBP13.21□□□□□ -0.29
SSR1-205ENST00000475213 AFMP43652 599 aa13.21□□□□□ -0.29
SSR1-205ENST00000475213 EPHA5P54756 1037 aa13.21□□□□□ -0.29
SSR1-205ENST00000475213 PLD1Q13393 1074 aa13.21□□□□□ -0.29
SSR1-205ENST00000475213 CUL4BQ13620 913 aa13.21□□□□□ -0.29
SSR1-205ENST00000475213 SV2CQ496J9 727 aa13.21□□□□□ -0.29
SSR1-205ENST00000475213 CYP4A22Q5TCH4 519 aa13.21□□□□□ -0.29
SSR1-205ENST00000475213 WSCD1Q658N2 575 aa13.21□□□□□ -0.29
SSR1-205ENST00000475213 SCARA3Q6AZY7 606 aa13.21□□□□□ -0.29
SSR1-205ENST00000475213 METTL23Q86XA0 190 aa13.21□□□□□ -0.29
SSR1-205ENST00000475213 TTC9BQ8N6N2 239 aa13.21□□□□□ -0.29
SSR1-205ENST00000475213 ZNF560Q96MR9 790 aa13.21□□□□□ -0.29
SSR1-205ENST00000475213 PLA2G2FQ9BZM2 168 aa13.21□□□□□ -0.29
SSR1-205ENST00000475213 ZCWPW1Q9H0M4 648 aa13.21□□□□□ -0.29
SSR1-205ENST00000475213 DNAJC25Q9H1X3 360 aa13.21□□□□□ -0.29
SSR1-205ENST00000475213 TBC1D17Q9HA65 648 aa13.21□□□□□ -0.29
SSR1-205ENST00000475213 ASAH2Q9NR71 780 aa13.21□□□□□ -0.29
SSR1-205ENST00000475213 ARHGEF3Q9NR81 526 aa13.21□□□□□ -0.29
SSR1-205ENST00000475213 AGAP1Q9UPQ3 857 aa13.21□□□□□ -0.29
SSR1-205ENST00000475213 SLC27A5Q9Y2P5 690 aa13.21□□□□□ -0.29
SSR1-205ENST00000475213 USP34Q70CQ2 3546 aa13.21□□□□□ -0.29
SSR1-205ENST00000475213 VPS13AQ96RL7 3174 aa13.21□□□□□ -0.3
SSR1-205ENST00000475213 MIA3Q5JRA6 1907 aa13.21□□□□□ -0.3
SSR1-205ENST00000475213 MYO15AQ9UKN7 3530 aa13.21□□□□□ -0.3
SSR1-205ENST00000475213 PVALEFA0A1B0GWK0 134 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 ZNF233A6NK53 670 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 H0Y858 1186 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 TGFB1I1O43294 461 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 ECI2O75521 394 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 MYL4P12829 197 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 PNPLA4P41247 253 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 ALDH1A3P47895 512 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 MRE11P49959 708 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 EPHB3P54753 998 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 SLC39A12Q504Y0 691 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 LMBRD2Q68DH5 695 aaPredicted RBP13.2□□□□□ -0.3
SSR1-205ENST00000475213 TANGO2Q6ICL3 276 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 CBWD2Q8IUF1 395 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 GRAMD1CQ8IYS0 662 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 CEP57L1Q8IYX8 460 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 THEM5Q8N1Q8 247 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 CSGALNACT2Q8N6G5 542 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 LEMD2Q8NC56 503 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 CXorf38Q8TB03 319 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 SCFD1Q8WVM8 642 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 ELSPBP1Q96BH3 223 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 CHAMP1Q96JM3 812 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 ZSWIM3Q96MP5 696 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 LRRC3Q9BY71 257 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 MTMR12Q9C0I1 747 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 IRF2BPLQ9H1B7 796 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 HSPBP1Q9NZL4 362 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 HSFX1Q9UBD0 423 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 SERTAD1Q9UHV2 236 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 SIX4Q9UIU6 781 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 ITGA11Q9UKX5 1188 aa13.2□□□□□ -0.3
SSR1-205ENST00000475213 DENND4CQ5VZ89 1909 aa13.19□□□□□ -0.3
SSR1-205ENST00000475213 UBE4BO95155 1302 aa13.19□□□□□ -0.3
SSR1-205ENST00000475213 COL4A3Q01955 1670 aa13.19□□□□□ -0.3
SSR1-205ENST00000475213 ACTN4O43707 911 aaKnown RBP13.19□□□□□ -0.3
SSR1-205ENST00000475213 SOAT2O75908 522 aa13.19□□□□□ -0.3
SSR1-205ENST00000475213 TMEM191BP0C7N4 346 aa13.19□□□□□ -0.3
SSR1-205ENST00000475213 SLFN14P0C7P3 912 aa13.19□□□□□ -0.3
SSR1-205ENST00000475213 GJA1P17302 382 aa13.19□□□□□ -0.3
SSR1-205ENST00000475213 RFX1P22670 979 aa13.19□□□□□ -0.3
SSR1-205ENST00000475213 FCARP24071 287 aa13.19□□□□□ -0.3
SSR1-205ENST00000475213 CDR1P51861 262 aa13.19□□□□□ -0.3
SSR1-205ENST00000475213 SNW1Q13573 536 aaKnown RBP13.19□□□□□ -0.3
SSR1-205ENST00000475213 FAM78AQ5JUQ0 283 aa13.19□□□□□ -0.3
SSR1-205ENST00000475213 PHLDB3Q6NSJ2 640 aa13.19□□□□□ -0.3
SSR1-205ENST00000475213 LRRTM3Q86VH5 581 aa13.19□□□□□ -0.3
SSR1-205ENST00000475213 TMC8Q8IU68 726 aa13.19□□□□□ -0.3
SSR1-205ENST00000475213 NELFCDQ8IXH7 590 aa13.19□□□□□ -0.3
SSR1-205ENST00000475213 PDCL2Q8N4E4 241 aa13.19□□□□□ -0.3
SSR1-205ENST00000475213 LRRC52Q8N7C0 313 aa13.19□□□□□ -0.3
SSR1-205ENST00000475213 SHKBP1Q8TBC3 707 aa13.19□□□□□ -0.3
SSR1-205ENST00000475213 LEO1Q8WVC0 666 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms