RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 ZCWPW1Q9H0M4 648 aa12.05□□□□□ -0.48
CKS1B-206ENST00000474215 CRISPLD1Q9H336 500 aa12.05□□□□□ -0.48
CKS1B-206ENST00000474215 MFSD1Q9H3U5 465 aa12.05□□□□□ -0.48
CKS1B-206ENST00000474215 EXOC1Q9NV70 894 aa12.05□□□□□ -0.48
CKS1B-206ENST00000474215 GDAP2Q9NXN4 497 aa12.05□□□□□ -0.48
CKS1B-206ENST00000474215 HSFX1Q9UBD0 423 aa12.05□□□□□ -0.48
CKS1B-206ENST00000474215 SIX4Q9UIU6 781 aa12.05□□□□□ -0.48
CKS1B-206ENST00000474215 FBXL21Q9UKT6 434 aa12.05□□□□□ -0.48
CKS1B-206ENST00000474215 SLC27A5Q9Y2P5 690 aa12.05□□□□□ -0.48
CKS1B-206ENST00000474215 R3HCC1Q9Y3T6 440 aaKnown RBP12.05□□□□□ -0.48
CKS1B-206ENST00000474215 YIPF1Q9Y548 306 aa12.05□□□□□ -0.48
CKS1B-206ENST00000474215 MYO10Q9HD67 2058 aa12.05□□□□□ -0.48
CKS1B-206ENST00000474215 MTMR11A4FU01 709 aa12.04□□□□□ -0.48
CKS1B-206ENST00000474215 TNNC2P02585 160 aa12.04□□□□□ -0.48
CKS1B-206ENST00000474215 CFHP08603 1231 aa12.04□□□□□ -0.48
CKS1B-206ENST00000474215 PLA2G5P39877 138 aa12.04□□□□□ -0.48
CKS1B-206ENST00000474215 TUFMP49411 452 aaKnown RBP12.04□□□□□ -0.48
CKS1B-206ENST00000474215 VCPP55072 806 aaKnown RBP12.04□□□□□ -0.48
CKS1B-206ENST00000474215 NUCB2P80303 420 aa12.04□□□□□ -0.48
CKS1B-206ENST00000474215 SMARCB1Q12824 385 aa12.04□□□□□ -0.48
CKS1B-206ENST00000474215 BFSP1Q12934 665 aa12.04□□□□□ -0.48
CKS1B-206ENST00000474215 MYO1EQ12965 1108 aa12.04□□□□□ -0.48
CKS1B-206ENST00000474215 SLC39A12Q504Y0 691 aa12.04□□□□□ -0.48
CKS1B-206ENST00000474215 IER5LQ5T953 404 aa12.04□□□□□ -0.48
CKS1B-206ENST00000474215 LMBRD2Q68DH5 695 aaPredicted RBP12.04□□□□□ -0.48
CKS1B-206ENST00000474215 PDZD4Q76G19 769 aaPredicted RBP12.04□□□□□ -0.48
CKS1B-206ENST00000474215 LRRTM3Q86VH5 581 aa12.04□□□□□ -0.48
CKS1B-206ENST00000474215 WDR49Q8IV35 697 aa12.04□□□□□ -0.48
CKS1B-206ENST00000474215 C12orf56Q8IXR9 622 aa12.04□□□□□ -0.48
CKS1B-206ENST00000474215 HS6ST3Q8IZP7 471 aa12.04□□□□□ -0.48
CKS1B-206ENST00000474215 SIX5Q8N196 739 aa12.04□□□□□ -0.48
CKS1B-206ENST00000474215 PDCL2Q8N4E4 241 aa12.04□□□□□ -0.48
CKS1B-206ENST00000474215 FSIP1Q8NA03 581 aa12.04□□□□□ -0.48
CKS1B-206ENST00000474215 LEMD2Q8NC56 503 aa12.04□□□□□ -0.48
CKS1B-206ENST00000474215 GOLGA5Q8TBA6 731 aa12.04□□□□□ -0.48
CKS1B-206ENST00000474215 TCEAL4Q96EI5 215 aa12.04□□□□□ -0.48
CKS1B-206ENST00000474215 PRRX2Q99811 253 aa12.04□□□□□ -0.48
CKS1B-206ENST00000474215 GDPD2Q9HCC8 539 aa12.04□□□□□ -0.48
CKS1B-206ENST00000474215 PTPRJQ12913 1337 aa12.04□□□□□ -0.48
CKS1B-206ENST00000474215 ANK1P16157 1881 aa12.04□□□□□ -0.48
CKS1B-206ENST00000474215 EXOC3O60645 756 aa12.03□□□□□ -0.48
CKS1B-206ENST00000474215 PRPF40AO75400 957 aaKnown RBP12.03□□□□□ -0.48
CKS1B-206ENST00000474215 ZNF202O95125 648 aa12.03□□□□□ -0.48
CKS1B-206ENST00000474215 RPN1P04843 607 aaKnown RBP12.03□□□□□ -0.48
CKS1B-206ENST00000474215 DLATP10515 647 aaKnown RBP12.03□□□□□ -0.48
CKS1B-206ENST00000474215 MYL4P12829 197 aa12.03□□□□□ -0.48
CKS1B-206ENST00000474215 CEBPBP17676 345 aa12.03□□□□□ -0.48
CKS1B-206ENST00000474215 CCR2P41597 374 aa12.03□□□□□ -0.48
CKS1B-206ENST00000474215 CLCN5P51795 746 aa12.03□□□□□ -0.48
CKS1B-206ENST00000474215 EPHA5P54756 1037 aa12.03□□□□□ -0.48
CKS1B-206ENST00000474215 GPC5P78333 572 aa12.03□□□□□ -0.48
CKS1B-206ENST00000474215 CYP24A1Q07973 514 aa12.03□□□□□ -0.48
CKS1B-206ENST00000474215 PSMD6Q15008 389 aa12.03□□□□□ -0.48
CKS1B-206ENST00000474215 ASTLQ6HA08 431 aaPredicted RBP12.03□□□□□ -0.48
CKS1B-206ENST00000474215 POTEHQ6S545 545 aa12.03□□□□□ -0.48
CKS1B-206ENST00000474215 KRBA2Q6ZNG9 492 aa12.03□□□□□ -0.48
CKS1B-206ENST00000474215 TRAPPC11Q7Z392 1133 aa12.03□□□□□ -0.48
CKS1B-206ENST00000474215 DCP1BQ8IZD4 617 aaKnown RBP12.03□□□□□ -0.48
CKS1B-206ENST00000474215 TMEM86AQ8N2M4 240 aa12.03□□□□□ -0.48
CKS1B-206ENST00000474215 TTC9BQ8N6N2 239 aa12.03□□□□□ -0.48
CKS1B-206ENST00000474215 KIAA0895Q8NCT3 520 aa12.03□□□□□ -0.48
CKS1B-206ENST00000474215 GPR152Q8TDT2 470 aa12.03□□□□□ -0.48
CKS1B-206ENST00000474215 C2orf15Q8WU43 125 aaKnown RBP12.03□□□□□ -0.48
CKS1B-206ENST00000474215 CCDC47Q96A33 483 aaKnown RBP12.03□□□□□ -0.48
CKS1B-206ENST00000474215 CCDC127Q96BQ5 260 aa12.03□□□□□ -0.48
CKS1B-206ENST00000474215 HPDLQ96IR7 371 aa12.03□□□□□ -0.48
CKS1B-206ENST00000474215 FNBP1Q96RU3 617 aa12.03□□□□□ -0.48
CKS1B-206ENST00000474215 GOLPH3LQ9H4A5 285 aa12.03□□□□□ -0.48
CKS1B-206ENST00000474215 ASAH2Q9NR71 780 aa12.03□□□□□ -0.48
CKS1B-206ENST00000474215 SLC2A4RGQ9NR83 387 aa12.03□□□□□ -0.48
CKS1B-206ENST00000474215 L1RE1Q9UN81 338 aa12.03□□□□□ -0.48
CKS1B-206ENST00000474215 ASB3Q9Y575 518 aa12.03□□□□□ -0.48
CKS1B-206ENST00000474215 SNX9Q9Y5X1 595 aa12.03□□□□□ -0.48
CKS1B-206ENST00000474215 WDFY4Q6ZS81 3184 aa12.03□□□□□ -0.48
CKS1B-206ENST00000474215 PDXKO00764 312 aa12.02□□□□□ -0.49
CKS1B-206ENST00000474215 MOSPD3O75425 235 aa12.02□□□□□ -0.49
CKS1B-206ENST00000474215 ECI2O75521 394 aa12.02□□□□□ -0.49
CKS1B-206ENST00000474215 SOAT2O75908 522 aa12.02□□□□□ -0.49
CKS1B-206ENST00000474215 NPR3P17342 541 aa12.02□□□□□ -0.49
CKS1B-206ENST00000474215 TNNI1P19237 187 aa12.02□□□□□ -0.49
CKS1B-206ENST00000474215 CDR1P51861 262 aa12.02□□□□□ -0.49
CKS1B-206ENST00000474215 NUBP1P53384 320 aa12.02□□□□□ -0.49
CKS1B-206ENST00000474215 TSPY1Q01534 308 aa12.02□□□□□ -0.49
CKS1B-206ENST00000474215 DPYDQ12882 1025 aa12.02□□□□□ -0.49
CKS1B-206ENST00000474215 SOWAHAQ2M3V2 549 aa12.02□□□□□ -0.49
CKS1B-206ENST00000474215 DPH6Q7L8W6 267 aa12.02□□□□□ -0.49
CKS1B-206ENST00000474215 DNAJB7Q7Z6W7 309 aaPredicted RBP12.02□□□□□ -0.49
CKS1B-206ENST00000474215 TOP6BLQ8N6T0 577 aa12.02□□□□□ -0.49
CKS1B-206ENST00000474215 FLCNQ8NFG4 579 aa12.02□□□□□ -0.49
CKS1B-206ENST00000474215 SPATA18Q8TC71 538 aa12.02□□□□□ -0.49
CKS1B-206ENST00000474215 SPPL2BQ8TCT7 592 aa12.02□□□□□ -0.49
CKS1B-206ENST00000474215 TMEM174Q8WUU8 243 aa12.02□□□□□ -0.49
CKS1B-206ENST00000474215 PSMG2Q969U7 264 aa12.02□□□□□ -0.49
CKS1B-206ENST00000474215 CGRRF1Q99675 332 aa12.02□□□□□ -0.49
CKS1B-206ENST00000474215 SEPT5Q99719 369 aaPredicted RBP12.02□□□□□ -0.49
CKS1B-206ENST00000474215 KXD1Q9BQD3 176 aa12.02□□□□□ -0.49
CKS1B-206ENST00000474215 ACBD6Q9BR61 282 aa12.02□□□□□ -0.49
CKS1B-206ENST00000474215 LRRC3Q9BY71 257 aa12.02□□□□□ -0.49
CKS1B-206ENST00000474215 DNAJC25Q9H1X3 360 aa12.02□□□□□ -0.49
CKS1B-206ENST00000474215 KCTD10Q9H3F6 313 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms