RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 RNF19BQ6ZMZ0 732 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 PHLPP2Q6ZVD8 1323 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 TAS1R3Q7RTX0 852 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 APBB1IPQ7Z5R6 666 aaPredicted RBP5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 KBTBD6Q86V97 674 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 RALGPS2Q86X27 583 aaPredicted RBP5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 ARID3BQ8IVW6 561 aaPredicted RBP5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 YAF2Q8IY57 180 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 DIS3L2Q8IYB7 885 aaKnown RBP5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 SYNPOQ8N3V7 929 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 C12orf50Q8NA57 414 aaPredicted RBP5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 KDF1Q8NAX2 398 aaPredicted RBP5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 APPL2Q8NEU8 664 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 GAB3Q8WWW8 586 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 KIFAP3Q92845 792 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 ZFYVE19Q96K21 471 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 IFT74Q96LB3 600 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 TBC1D32Q96NH3 1257 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 ACO2Q99798 780 aaKnown RBP5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 POLR3CQ9BUI4 534 aaPredicted RBP5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 CCDC94Q9BW85 323 aaPredicted RBP5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 LSM14BQ9BX40 385 aaKnown RBP5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 GPR88Q9GZN0 384 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 POLD4Q9HCU8 107 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 PDRG1Q9NUG6 133 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 GTSE1Q9NYZ3 720 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 ANKFY1Q9P2R3 1169 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 TPCN1Q9ULQ1 816 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 NUB1Q9Y5A7 615 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 HELZ2Q9BYK8 2649 aaKnown RBP5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 CCDC163A0A0D9SF12 145 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 BTBD18B2RXH4 712 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 K7ERI5 159 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 M0QZQ0 153 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 RPP40O75818 363 aaKnown RBP5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 AKAP3O75969 853 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 OAZ2O95190 189 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 KCNK5O95279 499 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 PRAMEF12O95522 483 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 OR4Q2P0C623 313 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 MCF2P10911 925 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 MCM4P33991 863 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 MCM7P33993 719 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 MPLP40238 635 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 NPTX2P47972 431 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 AARSP49588 968 aaKnown RBP eCLIP5.6□□□□□ -1.514e-6■■□□□ 11.6
SNRNP40-204ENST00000474025 TNK2Q07912 1038 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 DUSP4Q13115 394 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 PLD1Q13393 1074 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 LAPTM4AQ15012 233 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 ECM1Q16610 540 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 ARHGAP29Q52LW3 1261 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 PSAPL1Q6NUJ1 521 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 LRSAM1Q6UWE0 723 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 UNQ6494/PRO21346Q6UXR6 183 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 GAREM2Q75VX8 874 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 CACNA2D4Q7Z3S7 1137 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 GPIHBP1Q8IV16 184 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 DAW1Q8N136 415 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 TMEM130Q8N3G9 435 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 TTC8Q8TAM2 541 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 FAM200AQ8TCP9 573 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 WASF1Q92558 559 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 CHFRQ96EP1 664 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 ACAP3Q96P50 834 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 PGLYRP2Q96PD5 576 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 TARS2Q9BW92 718 aaKnown RBP5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 PRR14Q9BWN1 585 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 MRPL4Q9BYD3 311 aaKnown RBP5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 BHMT2Q9H2M3 363 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 SMOC1Q9H4F8 434 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 TMEM134Q9H6X4 195 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 OBP2AQ9NY56 170 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 ARHGAP28Q9P2N2 729 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 TUBGCP4Q9UGJ1 667 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 WASF3Q9UPY6 502 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 PCDHGA5Q9Y5G8 931 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 CACNA1EQ15878 2313 aa5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 KIF26AQ9ULI4 1882 aaPredicted RBP5.6□□□□□ -1.51
SNRNP40-204ENST00000474025 CITO14578 2027 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 OR6C75A6NL08 312 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 CCDC169A6NNP5 214 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 C1QTNF9BB2RNN3 333 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 GIPC1O14908 333 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 LARGE1O95461 756 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 OR52Z1P0C646 297 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 C1QTNF9P0C862 333 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 CCDC192P0DO97 292 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 HARSP12081 509 aaKnown RBP5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 MUTP22033 750 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 GABRR2P28476 465 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 WEE1P30291 646 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 ALDH1A3P47895 512 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 EPHB3P54753 998 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 PEX3P56589 373 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 YWHAHQ04917 246 aaPredicted RBP5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 GPR17Q13304 367 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 DMP1Q13316 513 aaPredicted RBP5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 NOLC1Q14978 699 aaKnown RBP eCLIP5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 SLC10A6Q3KNW5 377 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms