RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 ZCWPW1Q9H0M4 648 aa20.36■□□□□ 0.85
PTCD3-210ENST00000473829 DNMT3BQ9UBC3 853 aaKnown RBP20.36■□□□□ 0.85
PTCD3-210ENST00000473829 USTQ9Y2C2 406 aa20.36■□□□□ 0.85
PTCD3-210ENST00000473829 DCXO43602 365 aa20.35■□□□□ 0.85
PTCD3-210ENST00000473829 HCRTO43612 131 aa20.35■□□□□ 0.85
PTCD3-210ENST00000473829 HUS1O60921 280 aa20.35■□□□□ 0.85
PTCD3-210ENST00000473829 XYLBO75191 536 aa20.35■□□□□ 0.85
PTCD3-210ENST00000473829 BMP6P22004 513 aa20.35■□□□□ 0.85
PTCD3-210ENST00000473829 MYO1EQ12965 1108 aa20.35■□□□□ 0.85
PTCD3-210ENST00000473829 SOWAHAQ2M3V2 549 aa20.35■□□□□ 0.85
PTCD3-210ENST00000473829 EDRF1Q3B7T1 1238 aa20.35■□□□□ 0.85
PTCD3-210ENST00000473829 CLEC17AQ6ZS10 378 aa20.35■□□□□ 0.85
PTCD3-210ENST00000473829 RTL10Q7L3V2 364 aa20.35■□□□□ 0.85
PTCD3-210ENST00000473829 GET4Q7L5D6 327 aaPredicted RBP20.35■□□□□ 0.85
PTCD3-210ENST00000473829 LIMS2Q7Z4I7 341 aa20.35■□□□□ 0.85
PTCD3-210ENST00000473829 LRRTM3Q86VH5 581 aa20.35■□□□□ 0.85
PTCD3-210ENST00000473829 ADSSL1Q8N142 457 aa20.35■□□□□ 0.85
PTCD3-210ENST00000473829 ATAD1Q8NBU5 361 aa20.35■□□□□ 0.85
PTCD3-210ENST00000473829 FRMD4BQ9Y2L6 1034 aa20.35■□□□□ 0.85
PTCD3-210ENST00000473829 YIPF1Q9Y548 306 aa20.35■□□□□ 0.85
PTCD3-210ENST00000473829 TRIM49BA6NDI0 452 aa20.34■□□□□ 0.85
PTCD3-210ENST00000473829 LRG1P02750 347 aa20.34■□□□□ 0.85
PTCD3-210ENST00000473829 C4BPAP04003 597 aaKnown RBP20.34■□□□□ 0.85
PTCD3-210ENST00000473829 CD44P16070 742 aaKnown RBP20.34■□□□□ 0.85
PTCD3-210ENST00000473829 MYL6P60660 151 aa20.34■□□□□ 0.85
PTCD3-210ENST00000473829 DUSP4Q13115 394 aa20.34■□□□□ 0.85
PTCD3-210ENST00000473829 CCDC142Q17RM4 750 aa20.34■□□□□ 0.85
PTCD3-210ENST00000473829 SLC39A12Q504Y0 691 aa20.34■□□□□ 0.85
PTCD3-210ENST00000473829 CENPPQ6IPU0 288 aa20.34■□□□□ 0.85
PTCD3-210ENST00000473829 OTOP3Q7RTS5 596 aa20.34■□□□□ 0.85
PTCD3-210ENST00000473829 ADGRF2Q8IZF7 708 aa20.34■□□□□ 0.85
PTCD3-210ENST00000473829 ZDHHC14Q8IZN3 488 aa20.34■□□□□ 0.85
PTCD3-210ENST00000473829 TOP6BLQ8N6T0 577 aa20.34■□□□□ 0.85
PTCD3-210ENST00000473829 TMC2Q8TDI7 906 aa20.34■□□□□ 0.85
PTCD3-210ENST00000473829 KBTBD7Q8WVZ9 684 aa20.34■□□□□ 0.85
PTCD3-210ENST00000473829 ELMO3Q96BJ8 720 aa20.34■□□□□ 0.85
PTCD3-210ENST00000473829 IPO9Q96P70 1041 aaKnown RBP20.34■□□□□ 0.85
PTCD3-210ENST00000473829 XYLT2Q9H1B5 865 aa20.34■□□□□ 0.85
PTCD3-210ENST00000473829 R3HCC1Q9Y3T6 440 aaKnown RBP20.34■□□□□ 0.85
PTCD3-210ENST00000473829 MYO10Q9HD67 2058 aa20.33■□□□□ 0.85
PTCD3-210ENST00000473829 BIN1O00499 593 aa20.33■□□□□ 0.85
PTCD3-210ENST00000473829 MAPK13O15264 365 aa20.33■□□□□ 0.85
PTCD3-210ENST00000473829 SOAT2O75908 522 aa20.33■□□□□ 0.85
PTCD3-210ENST00000473829 VNN1O95497 513 aa20.33■□□□□ 0.85
PTCD3-210ENST00000473829 ASGR2P07307 311 aa20.33■□□□□ 0.85
PTCD3-210ENST00000473829 TRIM49P0CI25 452 aa20.33■□□□□ 0.85
PTCD3-210ENST00000473829 TRIM49CP0CI26 452 aa20.33■□□□□ 0.85
PTCD3-210ENST00000473829 ACAT1P24752 427 aaKnown RBP20.33■□□□□ 0.85
PTCD3-210ENST00000473829 TWF1Q12792 350 aa20.33■□□□□ 0.85
PTCD3-210ENST00000473829 ADAM9Q13443 819 aa20.33■□□□□ 0.85
PTCD3-210ENST00000473829 ANKRD40Q6AI12 368 aa20.33■□□□□ 0.85
PTCD3-210ENST00000473829 FAM186BQ8IYM0 893 aa20.33■□□□□ 0.85
PTCD3-210ENST00000473829 THEM5Q8N1Q8 247 aa20.33■□□□□ 0.85
PTCD3-210ENST00000473829 TMEM86AQ8N2M4 240 aa20.33■□□□□ 0.85
PTCD3-210ENST00000473829 ITFG1Q8TB96 612 aa20.33■□□□□ 0.85
PTCD3-210ENST00000473829 C11orf16Q9NQ32 467 aa20.33■□□□□ 0.85
PTCD3-210ENST00000473829 TMLHEQ9NVH6 421 aa20.33■□□□□ 0.85
PTCD3-210ENST00000473829 DDX43Q9NXZ2 648 aaKnown RBP20.33■□□□□ 0.85
PTCD3-210ENST00000473829 CEP72Q9P209 647 aa20.33■□□□□ 0.85
PTCD3-210ENST00000473829 LIMD1Q9UGP4 676 aa20.33■□□□□ 0.85
PTCD3-210ENST00000473829 MAFFQ9ULX9 164 aa20.33■□□□□ 0.85
PTCD3-210ENST00000473829 SLC27A5Q9Y2P5 690 aa20.33■□□□□ 0.85
PTCD3-210ENST00000473829 NRG2O14511 850 aaPredicted RBP20.32■□□□□ 0.84
PTCD3-210ENST00000473829 GABRDO14764 452 aa20.32■□□□□ 0.84
PTCD3-210ENST00000473829 FSHRP23945 695 aa20.32■□□□□ 0.84
PTCD3-210ENST00000473829 RPL13P26373 211 aaKnown RBP20.32■□□□□ 0.84
PTCD3-210ENST00000473829 GBP2P32456 591 aaPredicted RBP20.32■□□□□ 0.84
PTCD3-210ENST00000473829 VAMP7P51809 220 aa20.32■□□□□ 0.84
PTCD3-210ENST00000473829 BIRC3Q13489 604 aa20.32■□□□□ 0.84
PTCD3-210ENST00000473829 MORC3Q14149 939 aa20.32■□□□□ 0.84
PTCD3-210ENST00000473829 CAMK4Q16566 473 aa20.32■□□□□ 0.84
PTCD3-210ENST00000473829 PTPN21Q16825 1174 aa20.32■□□□□ 0.84
PTCD3-210ENST00000473829 SLC5A9Q2M3M2 681 aa20.32■□□□□ 0.84
PTCD3-210ENST00000473829 PABPC1LQ4VXU2 614 aaKnown RBP20.32■□□□□ 0.84
PTCD3-210ENST00000473829 ZC3H3Q8IXZ2 948 aaKnown RBP20.32■□□□□ 0.84
PTCD3-210ENST00000473829 ACSF2Q96CM8 615 aaPredicted RBP20.32■□□□□ 0.84
PTCD3-210ENST00000473829 PKMYT1Q99640 499 aa20.32■□□□□ 0.84
PTCD3-210ENST00000473829 DNAJC25Q9H1X3 360 aa20.32■□□□□ 0.84
PTCD3-210ENST00000473829 NME7Q9Y5B8 376 aa20.32■□□□□ 0.84
PTCD3-210ENST00000473829 FAM86C2PA6NEL3 165 aa20.31■□□□□ 0.84
PTCD3-210ENST00000473829 PHACTR2O75167 634 aa20.31■□□□□ 0.84
PTCD3-210ENST00000473829 STAU1O95793 577 aaKnown RBP20.31■□□□□ 0.84
PTCD3-210ENST00000473829 RHOP08100 348 aa20.31■□□□□ 0.84
PTCD3-210ENST00000473829 PSMC2P35998 433 aaKnown RBP20.31■□□□□ 0.84
PTCD3-210ENST00000473829 AP3M2P53677 418 aa20.31■□□□□ 0.84
PTCD3-210ENST00000473829 PPP3CAQ08209 521 aa20.31■□□□□ 0.84
PTCD3-210ENST00000473829 TRPC3Q13507 836 aa20.31■□□□□ 0.84
PTCD3-210ENST00000473829 ZACNQ401N2 412 aa20.31■□□□□ 0.84
PTCD3-210ENST00000473829 INTS6LQ5JSJ4 861 aaKnown RBP20.31■□□□□ 0.84
PTCD3-210ENST00000473829 SV2AQ7L0J3 742 aa20.31■□□□□ 0.84
PTCD3-210ENST00000473829 PLCD3Q8N3E9 789 aa20.31■□□□□ 0.84
PTCD3-210ENST00000473829 MRPL45Q9BRJ2 306 aaKnown RBP20.31■□□□□ 0.84
PTCD3-210ENST00000473829 SMOC2Q9H3U7 446 aa20.31■□□□□ 0.84
PTCD3-210ENST00000473829 PPP1R3GB7ZBB8 358 aa20.3■□□□□ 0.84
PTCD3-210ENST00000473829 ALADP13716 330 aa20.3■□□□□ 0.84
PTCD3-210ENST00000473829 NCOA4Q13772 614 aa20.3■□□□□ 0.84
PTCD3-210ENST00000473829 WDR72Q3MJ13 1102 aa20.3■□□□□ 0.84
PTCD3-210ENST00000473829 POTEHQ6S545 545 aa20.3■□□□□ 0.84
PTCD3-210ENST00000473829 INTS8Q75QN2 995 aaKnown RBP20.3■□□□□ 0.84
PTCD3-210ENST00000473829 DPH6Q7L8W6 267 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms