RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 CNTN3Q9P232 1028 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 ANKFY1Q9P2R3 1169 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 KCNG1Q9UIX4 513 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 NOL7Q9UMY1 257 aaKnown RBP7.54□□□□□ -1.2
CKS1B-205ENST00000473344 EP300Q09472 2414 aaPredicted RBP7.54□□□□□ -1.2
CKS1B-205ENST00000473344 PATJQ8NI35 1801 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 WDFY3Q8IZQ1 3526 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 ASPMQ8IZT6 3477 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 DOCK8Q8NF50 2099 aa7.53□□□□□ -1.2
CKS1B-205ENST00000473344 SHISA7A6NL88 538 aa7.53□□□□□ -1.2
CKS1B-205ENST00000473344 CHURC1-FNTBB4DL54 471 aa7.53□□□□□ -1.2
CKS1B-205ENST00000473344 CHADO15335 359 aa7.53□□□□□ -1.2
CKS1B-205ENST00000473344 CLDN3O15551 220 aa7.53□□□□□ -1.2
CKS1B-205ENST00000473344 HIP1RO75146 1068 aa7.53□□□□□ -1.2
CKS1B-205ENST00000473344 LARGE1O95461 756 aa7.53□□□□□ -1.2
CKS1B-205ENST00000473344 FGF19O95750 216 aa7.53□□□□□ -1.2
CKS1B-205ENST00000473344 TDGF1P13385 188 aa7.53□□□□□ -1.2
CKS1B-205ENST00000473344 FNTBP49356 437 aa7.53□□□□□ -1.2
CKS1B-205ENST00000473344 NEK4P51957 841 aa7.53□□□□□ -1.2
CKS1B-205ENST00000473344 SMTNP53814 917 aa7.53□□□□□ -1.2
CKS1B-205ENST00000473344 EPHA5P54756 1037 aa7.53□□□□□ -1.2
CKS1B-205ENST00000473344 SRSF5Q13243 272 aaKnown RBP7.53□□□□□ -1.2
CKS1B-205ENST00000473344 PDIA5Q14554 519 aa7.53□□□□□ -1.2
CKS1B-205ENST00000473344 ECM1Q16610 540 aa7.53□□□□□ -1.2
CKS1B-205ENST00000473344 AASDHQ4L235 1098 aaPredicted RBP7.53□□□□□ -1.2
CKS1B-205ENST00000473344 ARHGAP15Q53QZ3 475 aa7.53□□□□□ -1.2
CKS1B-205ENST00000473344 DGKKQ5KSL6 1271 aa7.53□□□□□ -1.2
CKS1B-205ENST00000473344 TTC38Q5R3I4 469 aa7.53□□□□□ -1.2
CKS1B-205ENST00000473344 KRT79Q5XKE5 535 aa7.53□□□□□ -1.2
CKS1B-205ENST00000473344 HEATR6Q6AI08 1181 aaKnown RBP7.53□□□□□ -1.2
CKS1B-205ENST00000473344 DSTYKQ6XUX3 929 aa7.53□□□□□ -1.2
CKS1B-205ENST00000473344 RALGPS2Q86X27 583 aaPredicted RBP7.53□□□□□ -1.2
CKS1B-205ENST00000473344 C12orf50Q8NA57 414 aaPredicted RBP7.53□□□□□ -1.2
CKS1B-205ENST00000473344 FAM184AQ8NB25 1140 aa7.53□□□□□ -1.2
CKS1B-205ENST00000473344 TTC8Q8TAM2 541 aa7.53□□□□□ -1.2
CKS1B-205ENST00000473344 FOXP1Q9H334 677 aaPredicted RBP7.53□□□□□ -1.2
CKS1B-205ENST00000473344 ATXN3LQ9H3M9 355 aa7.53□□□□□ -1.2
CKS1B-205ENST00000473344 PTPRHQ9HD43 1115 aa7.53□□□□□ -1.2
CKS1B-205ENST00000473344 RBM12Q9NTZ6 932 aaKnown RBP7.53□□□□□ -1.2
CKS1B-205ENST00000473344 ARHGAP28Q9P2N2 729 aa7.53□□□□□ -1.2
CKS1B-205ENST00000473344 PRDM4Q9UKN5 801 aa7.53□□□□□ -1.2
CKS1B-205ENST00000473344 YIPF1Q9Y548 306 aa7.53□□□□□ -1.2
CKS1B-205ENST00000473344 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.53□□□□□ -1.2
CKS1B-205ENST00000473344 LAMA1P25391 3075 aa7.53□□□□□ -1.2
CKS1B-205ENST00000473344 OR6C75A6NL08 312 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 SFI1A8K8P3 1242 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 E9PMD0 336 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 SPECC1L-ADORA2AF8WAN1 911 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 ARNTLO00327 626 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 SLC16A4O15374 487 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 XPOTO43592 962 aaKnown RBP7.52□□□□□ -1.21
CKS1B-205ENST00000473344 GDF9O60383 454 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 MOSPD3O75425 235 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 TOM1L1O75674 476 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 OR4Q2P0C623 313 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 PROZP22891 400 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 SOX9P48436 509 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 TRAPPC10P48553 1259 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 PPP2R3AQ06190 1150 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 DMWDQ09019 674 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 FCHO2Q0JRZ9 810 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 DUSP4Q13115 394 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 GAS6Q14393 721 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 NOLC1Q14978 699 aaKnown RBP eCLIP7.52□□□□□ -1.21
CKS1B-205ENST00000473344 PTPAQ15257 358 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 ZRSR1Q15695 479 aaKnown RBP7.52□□□□□ -1.21
CKS1B-205ENST00000473344 TAF12Q16514 161 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 C8orf34Q49A92 452 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 ARHGAP29Q52LW3 1261 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 SEZ6Q53EL9 994 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 ARMCX5Q6P1M9 558 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 Q6ZS52 159 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 ITIH5Q86UX2 942 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 GPIHBP1Q8IV16 184 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 ARID3BQ8IVW6 561 aaPredicted RBP7.52□□□□□ -1.21
CKS1B-205ENST00000473344 SHKBP1Q8TBC3 707 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 BICD1Q96G01 975 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 GCNAQ96QF7 691 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 TIPINQ9BVW5 301 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 SLC6A16Q9GZN6 736 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 PLEKHA5Q9HAU0 1116 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 THG1LQ9NWX6 298 aaKnown RBP7.52□□□□□ -1.21
CKS1B-205ENST00000473344 GTSE1Q9NYZ3 720 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 TUBGCP4Q9UGJ1 667 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 ASB3Q9Y575 518 aa7.52□□□□□ -1.21
CKS1B-205ENST00000473344 TIMM13Q9Y5L4 95 aaPredicted RBP7.52□□□□□ -1.21
CKS1B-205ENST00000473344 NCOR2Q9Y618 2525 aa7.51□□□□□ -1.21
CKS1B-205ENST00000473344 FANCMQ8IYD8 2048 aa7.51□□□□□ -1.21
CKS1B-205ENST00000473344 MYBPHLA2RUH7 354 aa7.51□□□□□ -1.21
CKS1B-205ENST00000473344 K7ESF4 209 aa7.51□□□□□ -1.21
CKS1B-205ENST00000473344 M0QZQ0 153 aa7.51□□□□□ -1.21
CKS1B-205ENST00000473344 AXIN1O15169 862 aa7.51□□□□□ -1.21
CKS1B-205ENST00000473344 TRAK2O60296 914 aa7.51□□□□□ -1.21
CKS1B-205ENST00000473344 ATG13O75143 517 aa7.51□□□□□ -1.21
CKS1B-205ENST00000473344 OAZ2O95190 189 aa7.51□□□□□ -1.21
CKS1B-205ENST00000473344 PAPSS2O95340 614 aaPredicted RBP7.51□□□□□ -1.21
CKS1B-205ENST00000473344 S1PR4O95977 384 aa7.51□□□□□ -1.21
CKS1B-205ENST00000473344 CLTAP09496 248 aa7.51□□□□□ -1.21
CKS1B-205ENST00000473344 CCDC192P0DO97 292 aa7.51□□□□□ -1.21
CKS1B-205ENST00000473344 CXCL8P10145 99 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms