RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 DYRK1BQ9Y463 629 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 PCDHA13Q9Y5I0 950 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 GTPBP10A4D1E9 387 aaKnown RBP8.99□□□□□ -0.97
CD47-204ENST00000471694 ORC4O43929 436 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 KRT37O76014 449 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 IGKV5-2P06315 115 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 SRGNP10124 158 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 UBXN2BQ14CS0 331 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 PHLDB3Q6NSJ2 640 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 KRT78Q8N1N4 520 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 TDRD7Q8NHU6 1098 aaKnown RBP8.99□□□□□ -0.97
CD47-204ENST00000471694 BRD8Q9H0E9 1235 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 UPF3AQ9H1J1 476 aaKnown RBP8.99□□□□□ -0.97
CD47-204ENST00000471694 HAUS4Q9H6D7 363 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 FBXO28Q9NVF7 368 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 H3BRB1 525 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 HMGCRP04035 888 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 TRIM49P0CI25 452 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 TRIM49CP0CI26 452 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 ACO1P21399 889 aaKnown RBP8.99□□□□□ -0.97
CD47-204ENST00000471694 VGLL4Q14135 290 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 STX19Q8N4C7 294 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 AP1M1Q9BXS5 423 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 STK33Q9BYT3 514 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 HIPK3Q9H422 1215 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 TUT1Q9H6E5 874 aaKnown RBP8.99□□□□□ -0.97
CD47-204ENST00000471694 VTA1Q9NP79 307 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 MRPS17Q9Y2R5 130 aaKnown RBP8.99□□□□□ -0.97
CD47-204ENST00000471694 C2orf81A6NN90 581 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 SLC9A3R1O14745 358 aaPredicted RBP8.98□□□□□ -0.97
CD47-204ENST00000471694 AKAP5P24588 427 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 CXCR5P32302 372 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 DR1Q01658 176 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 ORC2Q13416 577 aaPredicted RBP8.98□□□□□ -0.97
CD47-204ENST00000471694 MTFR1Q15390 333 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 COLEC12Q5KU26 742 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 SNAP47Q5SQN1 464 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 C11orf74Q86VG3 221 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 SLAIN1Q8ND83 568 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 PHF21AQ96BD5 680 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 FANCEQ9HB96 536 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 USP18Q9UMW8 372 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 ADGRA2Q96PE1 1338 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 IRS2Q9Y4H2 1338 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 CBX4O00257 560 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 STX7O15400 261 aaKnown RBP8.98□□□□□ -0.97
CD47-204ENST00000471694 ADH1AP07327 375 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 ELNP15502 786 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 LHX1P48742 406 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 MDH1BQ5I0G3 518 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 CRLF3Q8IUI8 442 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 PPP1R16AQ96I34 528 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 SYT17Q9BSW7 474 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 UBXN6Q9BZV1 441 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 TARSL2A2RTX5 802 aaKnown RBP8.98□□□□□ -0.97
CD47-204ENST00000471694 ATP5BP06576 529 aaKnown RBP8.98□□□□□ -0.97
CD47-204ENST00000471694 ENO2P09104 434 aaPredicted RBP8.98□□□□□ -0.97
CD47-204ENST00000471694 WEE2P0C1S8 567 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 TRMT11Q7Z4G4 463 aaKnown RBP8.98□□□□□ -0.97
CD47-204ENST00000471694 CXorf40AQ8TE69 158 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 VPS50Q96JG6 964 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 KCNH7Q9NS40 1196 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 LIMA1Q9UHB6 759 aaKnown RBP8.98□□□□□ -0.97
CD47-204ENST00000471694 GSG1L2A8MUP6 293 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 CDC16Q13042 620 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 NNTQ13423 1086 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 TPGS1Q6ZTW0 290 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 NRSN1Q8IZ57 195 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 ATL2Q8NHH9 583 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 P2RX7Q99572 595 aaKnown RBP8.98□□□□□ -0.97
CD47-204ENST00000471694 ZNF536O15090 1300 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 CA12O43570 354 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 KITP10721 976 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 PYGMP11217 842 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 MSH3P20585 1137 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 AARSP49588 968 aaKnown RBP eCLIP8.98□□□□□ -0.97
CD47-204ENST00000471694 EIF3EP60228 445 aaKnown RBP8.98□□□□□ -0.97
CD47-204ENST00000471694 ACTN3Q08043 901 aaPredicted RBP8.98□□□□□ -0.97
CD47-204ENST00000471694 DRAP1Q14919 205 aaPredicted RBP8.98□□□□□ -0.97
CD47-204ENST00000471694 CXCL17Q6UXB2 119 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 OTOP2Q7RTS6 562 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 UNC45BQ8IWX7 931 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 MCOLN3Q8TDD5 553 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 ACER1Q8TDN7 264 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 APBA2Q99767 749 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 CD163L1Q9NR16 1453 aa8.98□□□□□ -0.97
CD47-204ENST00000471694 KRT38O76015 456 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 HOXC6P09630 235 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 SLCO1A2P46721 670 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 UGT3A1Q6NUS8 523 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 WDR75Q8IWA0 830 aaKnown RBP8.97□□□□□ -0.97
CD47-204ENST00000471694 TTC17Q96AE7 1141 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 TSPAN17Q96FV3 270 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 RIPOR3Q96MK2 946 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 SERPINI1Q99574 410 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 ADAM2Q99965 735 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 PCMTD2Q9NV79 361 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 TARBP1Q13395 1621 aaKnown RBP8.97□□□□□ -0.97
CD47-204ENST00000471694 NRKQ7Z2Y5 1582 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 EXTL3O43909 919 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms