RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 PDE6CP51160 858 aa9.79□□□□□ -0.84
PTPRE-207ENST00000471218 MGAT3Q09327 533 aa9.79□□□□□ -0.84
PTPRE-207ENST00000471218 HYAL1Q12794 435 aa9.79□□□□□ -0.84
PTPRE-207ENST00000471218 TRPC3Q13507 836 aa9.79□□□□□ -0.84
PTPRE-207ENST00000471218 CUL2Q13617 745 aa9.79□□□□□ -0.84
PTPRE-207ENST00000471218 MTF1Q14872 753 aa9.79□□□□□ -0.84
PTPRE-207ENST00000471218 TMEM132DQ14C87 1099 aa9.79□□□□□ -0.84
PTPRE-207ENST00000471218 FBXO47Q5MNV8 452 aa9.79□□□□□ -0.84
PTPRE-207ENST00000471218 CCDC122Q5T0U0 273 aa9.79□□□□□ -0.84
PTPRE-207ENST00000471218 ZBTB33Q86T24 672 aa9.79□□□□□ -0.84
PTPRE-207ENST00000471218 RNF135Q8IUD6 432 aa9.79□□□□□ -0.84
PTPRE-207ENST00000471218 EFHBQ8N7U6 833 aa9.79□□□□□ -0.84
PTPRE-207ENST00000471218 SLC30A5Q8TAD4 765 aa9.79□□□□□ -0.84
PTPRE-207ENST00000471218 EPS8L1Q8TE68 723 aa9.79□□□□□ -0.84
PTPRE-207ENST00000471218 ZNF516Q92618 1163 aa9.79□□□□□ -0.84
PTPRE-207ENST00000471218 SEMA4DQ92854 862 aa9.79□□□□□ -0.84
PTPRE-207ENST00000471218 TRIM11Q96F44 468 aa9.79□□□□□ -0.84
PTPRE-207ENST00000471218 SNX27Q96L92 541 aa9.79□□□□□ -0.84
PTPRE-207ENST00000471218 KREMEN1Q96MU8 473 aa9.79□□□□□ -0.84
PTPRE-207ENST00000471218 ALS2CR12Q96Q35 445 aa9.79□□□□□ -0.84
PTPRE-207ENST00000471218 OSMRQ99650 979 aa9.79□□□□□ -0.84
PTPRE-207ENST00000471218 DESI2Q9BSY9 194 aa9.79□□□□□ -0.84
PTPRE-207ENST00000471218 TRIM6Q9C030 488 aaPredicted RBP9.79□□□□□ -0.84
PTPRE-207ENST00000471218 UBN1Q9NPG3 1134 aa9.79□□□□□ -0.84
PTPRE-207ENST00000471218 LCMT1Q9UIC8 334 aa9.79□□□□□ -0.84
PTPRE-207ENST00000471218 NAGPAQ9UK23 515 aa9.79□□□□□ -0.84
PTPRE-207ENST00000471218 LRFN2Q9ULH4 789 aa9.79□□□□□ -0.84
PTPRE-207ENST00000471218 R3HCC1Q9Y3T6 440 aaKnown RBP9.79□□□□□ -0.84
PTPRE-207ENST00000471218 PTPRSQ13332 1948 aa9.79□□□□□ -0.84
PTPRE-207ENST00000471218 CARNS1A5YM72 827 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 FOXN3O00409 490 aaPredicted RBP9.78□□□□□ -0.84
PTPRE-207ENST00000471218 GRM6O15303 877 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 ZNF623O75123 536 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 LSM8O95777 96 aaKnown RBP9.78□□□□□ -0.84
PTPRE-207ENST00000471218 H2AFZP0C0S5 128 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 CXCL8P10145 99 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 ATF7P17544 494 aaPredicted RBP9.78□□□□□ -0.84
PTPRE-207ENST00000471218 ZNF132P52740 706 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 HADHBP55084 474 aaKnown RBP9.78□□□□□ -0.84
PTPRE-207ENST00000471218 GNG11P61952 73 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 RBP5P82980 135 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 LPIN1Q14693 890 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 ZNF699Q32M78 642 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 SLC10A6Q3KNW5 377 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 ZBTB41Q5SVQ8 909 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 ALKBH5Q6P6C2 394 aaKnown RBP9.78□□□□□ -0.84
PTPRE-207ENST00000471218 ALKAL1Q6UXT8 129 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 TRIM67Q6ZTA4 783 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 HFE2Q6ZVN8 426 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 H2AFVQ71UI9 128 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 ZNF571Q7Z3V5 609 aaPredicted RBP9.78□□□□□ -0.84
PTPRE-207ENST00000471218 ARHGEF19Q8IW93 802 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 EFCAB13Q8IY85 973 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 THNSL1Q8IYQ7 743 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 C17orf53Q8N3J3 647 aaPredicted RBP9.78□□□□□ -0.84
PTPRE-207ENST00000471218 ACRBPQ8NEB7 543 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 BEST2Q8NFU1 509 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 SECISBP2LQ93073 1101 aaKnown RBP9.78□□□□□ -0.84
PTPRE-207ENST00000471218 PBXIP1Q96AQ6 731 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 NOX5Q96PH1 765 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 MTMR12Q9C0I1 747 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 XYLT2Q9H1B5 865 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 IGFLR1Q9H665 355 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 L2HGDHQ9H9P8 463 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 SLC38A7Q9NVC3 462 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 ADAMTS1Q9UHI8 967 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 PUF60Q9UHX1 559 aaKnown RBP9.78□□□□□ -0.84
PTPRE-207ENST00000471218 KIAA1257Q9ULG3 409 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 UBQLN1Q9UMX0 589 aaKnown RBP9.78□□□□□ -0.84
PTPRE-207ENST00000471218 PIN4Q9Y237 131 aaKnown RBP9.78□□□□□ -0.84
PTPRE-207ENST00000471218 CDY2AQ9Y6F7 541 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 RALGAPA2Q2PPJ7 1873 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 PTPRJQ12913 1337 aa9.78□□□□□ -0.84
PTPRE-207ENST00000471218 TTC3P53804 2025 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 WDFY4Q6ZS81 3184 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 CTAGE9A4FU28 777 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 LACTBL1A8MY62 500 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 ZNF263O14978 683 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 INPPL1O15357 1258 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 TACC1O75410 805 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 RPS6KA5O75582 802 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 PAEPP09466 180 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 TMEM253P0C7T8 217 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 MYBL1P10243 752 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 HARSP12081 509 aaKnown RBP9.77□□□□□ -0.85
PTPRE-207ENST00000471218 TNFSF9P41273 254 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 TFAMQ00059 246 aaKnown RBP9.77□□□□□ -0.85
PTPRE-207ENST00000471218 FOXK2Q01167 660 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 CDR2Q01850 454 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 MYO1EQ12965 1108 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 PAK2Q13177 524 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 ZBTB6Q15916 424 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 MRPL10Q7Z7H8 261 aaKnown RBP9.77□□□□□ -0.85
PTPRE-207ENST00000471218 RHOT2Q8IXI1 618 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 UBR7Q8N806 425 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 SMRP1Q8NCR6 262 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 OR5B17Q8NGF7 314 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 SPATA18Q8TC71 538 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 MICAL1Q8TDZ2 1067 aa9.77□□□□□ -0.85
PTPRE-207ENST00000471218 ZBTB10Q96DT7 871 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms