RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 MTMR11A4FU01 709 aa16.89■□□□□ 0.29
HDAC6-218ENST00000470942 VNN2O95498 520 aa16.89■□□□□ 0.29
HDAC6-218ENST00000470942 ALDH1A3P47895 512 aa16.89■□□□□ 0.29
HDAC6-218ENST00000470942 CDR1P51861 262 aa16.89■□□□□ 0.29
HDAC6-218ENST00000470942 MYO1EQ12965 1108 aa16.89■□□□□ 0.29
HDAC6-218ENST00000470942 PLD1Q13393 1074 aa16.89■□□□□ 0.29
HDAC6-218ENST00000470942 PSMD6Q15008 389 aa16.89■□□□□ 0.29
HDAC6-218ENST00000470942 CYP4A22Q5TCH4 519 aa16.89■□□□□ 0.29
HDAC6-218ENST00000470942 CENPPQ6IPU0 288 aa16.89■□□□□ 0.29
HDAC6-218ENST00000470942 SUGP1Q8IWZ8 645 aaKnown RBP16.89■□□□□ 0.29
HDAC6-218ENST00000470942 HS6ST3Q8IZP7 471 aa16.89■□□□□ 0.29
HDAC6-218ENST00000470942 SLC44A3Q8N4M1 653 aa16.89■□□□□ 0.29
HDAC6-218ENST00000470942 CXorf38Q8TB03 319 aa16.89■□□□□ 0.29
HDAC6-218ENST00000470942 MCRS1Q96EZ8 462 aa16.89■□□□□ 0.29
HDAC6-218ENST00000470942 CGRRF1Q99675 332 aa16.89■□□□□ 0.29
HDAC6-218ENST00000470942 RTP3Q9BQQ7 232 aa16.89■□□□□ 0.29
HDAC6-218ENST00000470942 ZCWPW1Q9H0M4 648 aa16.89■□□□□ 0.29
HDAC6-218ENST00000470942 CEP72Q9P209 647 aa16.89■□□□□ 0.29
HDAC6-218ENST00000470942 PDXKO00764 312 aa16.88■□□□□ 0.29
HDAC6-218ENST00000470942 ZNF197O14709 1029 aa16.88■□□□□ 0.29
HDAC6-218ENST00000470942 NARSO43776 548 aaKnown RBP16.88■□□□□ 0.29
HDAC6-218ENST00000470942 PRPF40AO75400 957 aaKnown RBP16.88■□□□□ 0.29
HDAC6-218ENST00000470942 RHOBTB3O94955 611 aa16.88■□□□□ 0.29
HDAC6-218ENST00000470942 KIF20AO95235 890 aa16.88■□□□□ 0.29
HDAC6-218ENST00000470942 MYL4P12829 197 aa16.88■□□□□ 0.29
HDAC6-218ENST00000470942 EPHB3P54753 998 aa16.88■□□□□ 0.29
HDAC6-218ENST00000470942 SLC5A9Q2M3M2 681 aa16.88■□□□□ 0.29
HDAC6-218ENST00000470942 PDZD4Q76G19 769 aaPredicted RBP16.88■□□□□ 0.29
HDAC6-218ENST00000470942 TRAPPC11Q7Z392 1133 aa16.88■□□□□ 0.29
HDAC6-218ENST00000470942 DCP1BQ8IZD4 617 aaKnown RBP16.88■□□□□ 0.29
HDAC6-218ENST00000470942 PDCL2Q8N4E4 241 aa16.88■□□□□ 0.29
HDAC6-218ENST00000470942 FBXL6Q8N531 539 aa16.88■□□□□ 0.29
HDAC6-218ENST00000470942 HPDLQ96IR7 371 aa16.88■□□□□ 0.29
HDAC6-218ENST00000470942 CRISPLD1Q9H336 500 aa16.88■□□□□ 0.29
HDAC6-218ENST00000470942 KCTD10Q9H3F6 313 aa16.88■□□□□ 0.29
HDAC6-218ENST00000470942 AVENQ9NQS1 362 aaPredicted RBP16.88■□□□□ 0.29
HDAC6-218ENST00000470942 GDAP2Q9NXN4 497 aa16.88■□□□□ 0.29
HDAC6-218ENST00000470942 FBXL21Q9UKT6 434 aa16.88■□□□□ 0.29
HDAC6-218ENST00000470942 L1RE1Q9UN81 338 aa16.88■□□□□ 0.29
HDAC6-218ENST00000470942 DUSP12Q9UNI6 340 aa16.88■□□□□ 0.29
HDAC6-218ENST00000470942 NUMBLQ9Y6R0 609 aa16.88■□□□□ 0.29
HDAC6-218ENST00000470942 ANHXE9PGG2 379 aa16.87■□□□□ 0.29
HDAC6-218ENST00000470942 CALUO43852 315 aaPredicted RBP16.87■□□□□ 0.29
HDAC6-218ENST00000470942 PDGFBP01127 241 aaPredicted RBP16.87■□□□□ 0.29
HDAC6-218ENST00000470942 CEBPBP17676 345 aa16.87■□□□□ 0.29
HDAC6-218ENST00000470942 MYL7Q01449 175 aa16.87■□□□□ 0.29
HDAC6-218ENST00000470942 TSPY1Q01534 308 aa16.87■□□□□ 0.29
HDAC6-218ENST00000470942 HTR4Q13639 388 aa16.87■□□□□ 0.29
HDAC6-218ENST00000470942 PARM1Q6UWI2 310 aa16.87■□□□□ 0.29
HDAC6-218ENST00000470942 MTSS1LQ765P7 747 aa16.87■□□□□ 0.29
HDAC6-218ENST00000470942 NPAS3Q8IXF0 933 aa16.87■□□□□ 0.29
HDAC6-218ENST00000470942 TMEM86AQ8N2M4 240 aa16.87■□□□□ 0.29
HDAC6-218ENST00000470942 FGF14Q92915 247 aa16.87■□□□□ 0.29
HDAC6-218ENST00000470942 TCEAL4Q96EI5 215 aa16.87■□□□□ 0.29
HDAC6-218ENST00000470942 SEPT5Q99719 369 aaPredicted RBP16.87■□□□□ 0.29
HDAC6-218ENST00000470942 ASAH2Q9NR71 780 aa16.87■□□□□ 0.29
HDAC6-218ENST00000470942 DDX43Q9NXZ2 648 aaKnown RBP16.87■□□□□ 0.29
HDAC6-218ENST00000470942 MAPK8IP1Q9UQF2 711 aa16.87■□□□□ 0.29
HDAC6-218ENST00000470942 SOAT2O75908 522 aa16.86■□□□□ 0.29
HDAC6-218ENST00000470942 NR3C1P04150 777 aa16.86■□□□□ 0.29
HDAC6-218ENST00000470942 CFHP08603 1231 aa16.86■□□□□ 0.29
HDAC6-218ENST00000470942 TUFMP49411 452 aaKnown RBP16.86■□□□□ 0.29
HDAC6-218ENST00000470942 TRPC3Q13507 836 aa16.86■□□□□ 0.29
HDAC6-218ENST00000470942 PNOCQ13519 176 aa16.86■□□□□ 0.29
HDAC6-218ENST00000470942 KCNB1Q14721 858 aa16.86■□□□□ 0.29
HDAC6-218ENST00000470942 MGAT5BQ3V5L5 792 aa16.86■□□□□ 0.29
HDAC6-218ENST00000470942 PRSS36Q5K4E3 855 aa16.86■□□□□ 0.29
HDAC6-218ENST00000470942 LRRTM3Q86VH5 581 aa16.86■□□□□ 0.29
HDAC6-218ENST00000470942 SLC9A9Q8IVB4 645 aa16.86■□□□□ 0.29
HDAC6-218ENST00000470942 ADGRF2Q8IZF7 708 aa16.86■□□□□ 0.29
HDAC6-218ENST00000470942 FMR1NBQ8N0W7 255 aaPredicted RBP16.86■□□□□ 0.29
HDAC6-218ENST00000470942 TTC9BQ8N6N2 239 aa16.86■□□□□ 0.29
HDAC6-218ENST00000470942 TOP6BLQ8N6T0 577 aa16.86■□□□□ 0.29
HDAC6-218ENST00000470942 FAM200AQ8TCP9 573 aa16.86■□□□□ 0.29
HDAC6-218ENST00000470942 MFSD1Q9H3U5 465 aa16.86■□□□□ 0.29
HDAC6-218ENST00000470942 DMAC2Q9NW81 257 aa16.86■□□□□ 0.29
HDAC6-218ENST00000470942 GDE1Q9NZC3 331 aa16.86■□□□□ 0.29
HDAC6-218ENST00000470942 PHACTR2O75167 634 aa16.85■□□□□ 0.29
HDAC6-218ENST00000470942 CST3P01034 146 aaPredicted RBP16.85■□□□□ 0.29
HDAC6-218ENST00000470942 ACAT1P24752 427 aaKnown RBP16.85■□□□□ 0.29
HDAC6-218ENST00000470942 CCR2P41597 374 aa16.85■□□□□ 0.29
HDAC6-218ENST00000470942 LHX1P48742 406 aa16.85■□□□□ 0.29
HDAC6-218ENST00000470942 CASP4P49662 377 aa16.85■□□□□ 0.29
HDAC6-218ENST00000470942 FAM160A1Q05DH4 1040 aa16.85■□□□□ 0.29
HDAC6-218ENST00000470942 SMARCB1Q12824 385 aa16.85■□□□□ 0.29
HDAC6-218ENST00000470942 CEP135Q66GS9 1140 aa16.85■□□□□ 0.29
HDAC6-218ENST00000470942 OSTM1Q86WC4 334 aa16.85■□□□□ 0.29
HDAC6-218ENST00000470942 LEMD2Q8NC56 503 aa16.85■□□□□ 0.29
HDAC6-218ENST00000470942 SPPL2BQ8TCT7 592 aa16.85■□□□□ 0.29
HDAC6-218ENST00000470942 C2orf15Q8WU43 125 aaKnown RBP16.85■□□□□ 0.29
HDAC6-218ENST00000470942 ZNF516Q92618 1163 aa16.85■□□□□ 0.29
HDAC6-218ENST00000470942 MMS19Q96T76 1030 aa16.85■□□□□ 0.29
HDAC6-218ENST00000470942 KXD1Q9BQD3 176 aa16.85■□□□□ 0.29
HDAC6-218ENST00000470942 ACBD6Q9BR61 282 aa16.85■□□□□ 0.29
HDAC6-218ENST00000470942 RPP25Q9BUL9 199 aaKnown RBP16.85■□□□□ 0.29
HDAC6-218ENST00000470942 ABI2Q9NYB9 513 aaPredicted RBP16.85■□□□□ 0.29
HDAC6-218ENST00000470942 HSFX1Q9UBD0 423 aa16.85■□□□□ 0.29
HDAC6-218ENST00000470942 ASB3Q9Y575 518 aa16.85■□□□□ 0.29
HDAC6-218ENST00000470942 PCDHB5Q9Y5E4 795 aa16.85■□□□□ 0.29
HDAC6-218ENST00000470942 ZDBF2Q9HCK1 2354 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms