RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 IMPG2Q9BZV3 1241 aa13.53□□□□□ -0.24
SND1-209ENST00000470723 NIF3L1Q9GZT8 377 aa13.53□□□□□ -0.24
SND1-209ENST00000470723 RBSNQ9H1K0 784 aa13.53□□□□□ -0.24
SND1-209ENST00000470723 PLCB1Q9NQ66 1216 aa13.53□□□□□ -0.24
SND1-209ENST00000470723 TIMM13Q9Y5L4 95 aaPredicted RBP13.53□□□□□ -0.24
SND1-209ENST00000470723 COL6A3P12111 3177 aa13.53□□□□□ -0.24
SND1-209ENST00000470723 OR6C75A6NL08 312 aa13.52□□□□□ -0.25
SND1-209ENST00000470723 ABLIM3O94929 683 aa13.52□□□□□ -0.25
SND1-209ENST00000470723 CNPP09543 421 aaKnown RBP13.52□□□□□ -0.25
SND1-209ENST00000470723 GNL1P36915 607 aaPredicted RBP13.52□□□□□ -0.25
SND1-209ENST00000470723 TNNC1P63316 161 aa13.52□□□□□ -0.25
SND1-209ENST00000470723 FANCCQ00597 558 aa13.52□□□□□ -0.25
SND1-209ENST00000470723 INCA1Q0VD86 236 aa13.52□□□□□ -0.25
SND1-209ENST00000470723 KCNC3Q14003 757 aa13.52□□□□□ -0.25
SND1-209ENST00000470723 COL19A1Q14993 1142 aa13.52□□□□□ -0.25
SND1-209ENST00000470723 OVOS1Q6IE37 1185 aa13.52□□□□□ -0.25
SND1-209ENST00000470723 TRIM65Q6PJ69 517 aa13.52□□□□□ -0.25
SND1-209ENST00000470723 RSPO2Q6UXX9 243 aaPredicted RBP13.52□□□□□ -0.25
SND1-209ENST00000470723 TMEM184AQ6ZMB5 413 aa13.52□□□□□ -0.25
SND1-209ENST00000470723 UNC93AQ86WB7 457 aa13.52□□□□□ -0.25
SND1-209ENST00000470723 METTL23Q86XA0 190 aa13.52□□□□□ -0.25
SND1-209ENST00000470723 CEP57Q86XR8 500 aa13.52□□□□□ -0.25
SND1-209ENST00000470723 CRYBG2Q8N1P7 616 aa13.52□□□□□ -0.25
SND1-209ENST00000470723 THEM5Q8N1Q8 247 aa13.52□□□□□ -0.25
SND1-209ENST00000470723 UBR7Q8N806 425 aa13.52□□□□□ -0.25
SND1-209ENST00000470723 MICAL1Q8TDZ2 1067 aa13.52□□□□□ -0.25
SND1-209ENST00000470723 GUCD1Q96NT3 240 aa13.52□□□□□ -0.25
SND1-209ENST00000470723 NT5C1BQ96P26 610 aa13.52□□□□□ -0.25
SND1-209ENST00000470723 CDCA3Q99618 268 aaPredicted RBP13.52□□□□□ -0.25
SND1-209ENST00000470723 CRACR2AQ9BSW2 395 aa13.52□□□□□ -0.25
SND1-209ENST00000470723 INTS2Q9H0H0 1204 aaKnown RBP13.52□□□□□ -0.25
SND1-209ENST00000470723 SDCBP2Q9H190 292 aa13.52□□□□□ -0.25
SND1-209ENST00000470723 SIX2Q9NPC8 291 aa13.52□□□□□ -0.25
SND1-209ENST00000470723 NXF1Q9UBU9 619 aaKnown RBP13.52□□□□□ -0.25
SND1-209ENST00000470723 FBXL5Q9UKA1 691 aa13.52□□□□□ -0.25
SND1-209ENST00000470723 MAFFQ9ULX9 164 aa13.52□□□□□ -0.25
SND1-209ENST00000470723 POLIQ9UNA4 740 aa13.52□□□□□ -0.25
SND1-209ENST00000470723 CNTN6Q9UQ52 1028 aa13.52□□□□□ -0.25
SND1-209ENST00000470723 A0A1W2PQC6 194 aa13.51□□□□□ -0.25
SND1-209ENST00000470723 TEX28O15482 410 aa13.51□□□□□ -0.25
SND1-209ENST00000470723 CLASP2O75122 1294 aaKnown RBP13.51□□□□□ -0.25
SND1-209ENST00000470723 PAPLNO95428 1278 aa13.51□□□□□ -0.25
SND1-209ENST00000470723 TBXAS1P24557 533 aaPredicted RBP13.51□□□□□ -0.25
SND1-209ENST00000470723 LMO2P25791 158 aa13.51□□□□□ -0.25
SND1-209ENST00000470723 CDH8P55286 799 aa13.51□□□□□ -0.25
SND1-209ENST00000470723 UBXN1Q04323 297 aa13.51□□□□□ -0.25
SND1-209ENST00000470723 GPR17Q13304 367 aa13.51□□□□□ -0.25
SND1-209ENST00000470723 CUL2Q13617 745 aa13.51□□□□□ -0.25
SND1-209ENST00000470723 PSMD5Q16401 504 aa13.51□□□□□ -0.25
SND1-209ENST00000470723 UVSSAQ2YD98 709 aa13.51□□□□□ -0.25
SND1-209ENST00000470723 FILIP1LQ4L180 1135 aa13.51□□□□□ -0.25
SND1-209ENST00000470723 ZNF280DQ6N043 979 aa13.51□□□□□ -0.25
SND1-209ENST00000470723 FAM171BQ6P995 826 aa13.51□□□□□ -0.25
SND1-209ENST00000470723 PRSS55Q6UWB4 352 aaPredicted RBP13.51□□□□□ -0.25
SND1-209ENST00000470723 RTL10Q7L3V2 364 aa13.51□□□□□ -0.25
SND1-209ENST00000470723 ENOSF1Q7L5Y1 443 aa13.51□□□□□ -0.25
SND1-209ENST00000470723 OSTM1Q86WC4 334 aa13.51□□□□□ -0.25
SND1-209ENST00000470723 SLC22A17Q8WUG5 538 aa13.51□□□□□ -0.25
SND1-209ENST00000470723 HDAC7Q8WUI4 952 aa13.51□□□□□ -0.25
SND1-209ENST00000470723 AUTS2Q8WXX7 1259 aa13.51□□□□□ -0.25
SND1-209ENST00000470723 MMS19Q96T76 1030 aa13.51□□□□□ -0.25
SND1-209ENST00000470723 PKMYT1Q99640 499 aa13.51□□□□□ -0.25
SND1-209ENST00000470723 MRPL45Q9BRJ2 306 aaKnown RBP13.51□□□□□ -0.25
SND1-209ENST00000470723 NAA15Q9BXJ9 866 aaKnown RBP13.51□□□□□ -0.25
SND1-209ENST00000470723 EMILIN2Q9BXX0 1053 aa13.51□□□□□ -0.25
SND1-209ENST00000470723 ZCWPW1Q9H0M4 648 aa13.51□□□□□ -0.25
SND1-209ENST00000470723 NSUN3Q9H649 340 aaKnown RBP13.51□□□□□ -0.25
SND1-209ENST00000470723 ENTPD7Q9NQZ7 604 aa13.51□□□□□ -0.25
SND1-209ENST00000470723 BARX2Q9UMQ3 279 aaPredicted RBP13.51□□□□□ -0.25
SND1-209ENST00000470723 SIK3Q9Y2K2 1263 aa13.51□□□□□ -0.25
SND1-209ENST00000470723 DAAM1Q9Y4D1 1078 aa13.51□□□□□ -0.25
SND1-209ENST00000470723 NME7Q9Y5B8 376 aa13.51□□□□□ -0.25
SND1-209ENST00000470723 REV3LO60673 3130 aa13.51□□□□□ -0.25
SND1-209ENST00000470723 MTCL1Q9Y4B5 1905 aaKnown RBP13.51□□□□□ -0.25
SND1-209ENST00000470723 CUL9Q8IWT3 2517 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 ADAM12O43184 909 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 TEX33O43247 280 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 NCK2O43639 380 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 NOL4O94818 638 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 WEE2P0C1S8 567 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 ACO1P21399 889 aaKnown RBP13.5□□□□□ -0.25
SND1-209ENST00000470723 PCSK1P29120 753 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 NDUFV1P49821 464 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 SMARCB1Q12824 385 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 DUSP6Q16828 381 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 CTXN3Q4LDR2 81 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 FKBP15Q5T1M5 1219 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 KLHDC7AQ5VTJ3 777 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 PLPP4Q5VZY2 271 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 TPGS2Q68CL5 300 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 SARM1Q6SZW1 724 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 LRRTM3Q86VH5 581 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 PPFIBP1Q86W92 1011 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 ADGRF2Q8IZF7 708 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 RNF214Q8ND24 703 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 ZNF461Q8TAF7 563 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 WHAMMQ8TF30 809 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 ELMO3Q96BJ8 720 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 FAM122AQ96E09 287 aa13.5□□□□□ -0.25
SND1-209ENST00000470723 FAM161BQ96MY7 647 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms